RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 ANAPC1Q9H1A4 1944 aa5.64□□□□□ -1.51
COLCA1-205ENST00000620864 DEFB105AQ8NG35 78 aa5.64□□□□□ -1.51
COLCA1-205ENST00000620864 PRR4Q16378 134 aa5.64□□□□□ -1.51
COLCA1-205ENST00000620864 PTPRQQ9UMZ3 2332 aa5.64□□□□□ -1.51
COLCA1-205ENST00000620864 IGKV1-16P04430 117 aa5.64□□□□□ -1.51
COLCA1-205ENST00000620864 PRR20EP86478 221 aa5.64□□□□□ -1.51
COLCA1-205ENST00000620864 PRR20CP86479 221 aa5.64□□□□□ -1.51
COLCA1-205ENST00000620864 PRR20DP86480 221 aa5.64□□□□□ -1.51
COLCA1-205ENST00000620864 PRR20BP86481 221 aa5.64□□□□□ -1.51
COLCA1-205ENST00000620864 PRR20AP86496 221 aa5.64□□□□□ -1.51
COLCA1-205ENST00000620864 FGF23Q9GZV9 251 aaPredicted RBP5.64□□□□□ -1.51
COLCA1-205ENST00000620864 NAV3Q8IVL0 2385 aa5.64□□□□□ -1.51
COLCA1-205ENST00000620864 NDUFA1O15239 70 aa5.63□□□□□ -1.51
COLCA1-205ENST00000620864 NLRC5Q86WI3 1866 aa5.63□□□□□ -1.51
COLCA1-205ENST00000620864 SMIM9A6NGZ8 99 aa5.63□□□□□ -1.51
COLCA1-205ENST00000620864 IGLV2-23P01705 113 aa5.63□□□□□ -1.51
COLCA1-205ENST00000620864 UBE2D1P51668 147 aa5.63□□□□□ -1.51
COLCA1-205ENST00000620864 EFNA2O43921 213 aa5.63□□□□□ -1.51
COLCA1-205ENST00000620864 ELANEP08246 267 aa5.63□□□□□ -1.51
COLCA1-205ENST00000620864 FXYD2P54710 66 aa5.63□□□□□ -1.51
COLCA1-205ENST00000620864 FANCD2OSQ96PS1 177 aa5.63□□□□□ -1.51
COLCA1-205ENST00000620864 PRORYQ9H606 182 aa5.63□□□□□ -1.51
COLCA1-205ENST00000620864 FAM208BQ5VWN6 2430 aa5.63□□□□□ -1.51
COLCA1-205ENST00000620864 NUPR2A6NF83 97 aa5.63□□□□□ -1.51
COLCA1-205ENST00000620864 C16orf74Q96GX8 76 aa5.63□□□□□ -1.51
COLCA1-205ENST00000620864 SMIM26A0A096LP01 95 aa5.63□□□□□ -1.51
COLCA1-205ENST00000620864 LOXL1Q08397 574 aaPredicted RBP5.63□□□□□ -1.51
COLCA1-205ENST00000620864 NDUFA11Q86Y39 141 aa5.63□□□□□ -1.51
COLCA1-205ENST00000620864 CAMK2N2Q96S95 79 aa5.63□□□□□ -1.51
COLCA1-205ENST00000620864 KLK9Q9UKQ9 250 aa5.63□□□□□ -1.51
COLCA1-205ENST00000620864 IGF2BP2-AS1Q96M15 143 aa5.62□□□□□ -1.51
COLCA1-205ENST00000620864 PHF3Q92576 2039 aaKnown RBP5.62□□□□□ -1.51
COLCA1-205ENST00000620864 CCL18P55774 89 aa5.62□□□□□ -1.51
COLCA1-205ENST00000620864 KIAA1549LQ6ZVL6 1849 aa5.62□□□□□ -1.51
COLCA1-205ENST00000620864 LECT2O14960 151 aa5.62□□□□□ -1.51
COLCA1-205ENST00000620864 XCL1P47992 114 aa5.62□□□□□ -1.51
COLCA1-205ENST00000620864 A0A0J9YXY3 114 aa5.62□□□□□ -1.51
COLCA1-205ENST00000620864 K7EQD1 137 aa5.62□□□□□ -1.51
COLCA1-205ENST00000620864 ATP6V0E1O15342 81 aa5.62□□□□□ -1.51
COLCA1-205ENST00000620864 FAM120AOSQ5T036 256 aa5.62□□□□□ -1.51
COLCA1-205ENST00000620864 GPHB5Q86YW7 130 aa5.62□□□□□ -1.51
COLCA1-205ENST00000620864 IGHV3-16A0A0C4DH30 117 aa5.62□□□□□ -1.51
COLCA1-205ENST00000620864 A6NED7 52 aa5.62□□□□□ -1.51
COLCA1-205ENST00000620864 P0DMU3 169 aa5.62□□□□□ -1.51
COLCA1-205ENST00000620864 FAM231AP0DMU4 169 aa5.62□□□□□ -1.51
COLCA1-205ENST00000620864 FAM231CP0DMU5 169 aa5.62□□□□□ -1.51
COLCA1-205ENST00000620864 U3KQK5 164 aa5.62□□□□□ -1.51
COLCA1-205ENST00000620864 SONP18583 2426 aaKnown RBP5.62□□□□□ -1.51
COLCA1-205ENST00000620864 DYSFO75923 2080 aa5.62□□□□□ -1.51
COLCA1-205ENST00000620864 MIAQ16674 131 aa5.62□□□□□ -1.51
COLCA1-205ENST00000620864 C20orf197Q8N268 126 aa5.62□□□□□ -1.51
COLCA1-205ENST00000620864 FAM110AQ9BQ89 295 aa5.62□□□□□ -1.51
COLCA1-205ENST00000620864 PLXNB3Q9ULL4 1909 aa5.62□□□□□ -1.51
COLCA1-205ENST00000620864 IGKV4-1P06312 121 aa5.61□□□□□ -1.51
COLCA1-205ENST00000620864 IGFL4Q6B9Z1 124 aa5.61□□□□□ -1.51
COLCA1-205ENST00000620864 HIST2H2BDQ6DRA6 164 aa5.61□□□□□ -1.51
COLCA1-205ENST00000620864 WIPF3A6NGB9 483 aa5.61□□□□□ -1.51
COLCA1-205ENST00000620864 COL8A2P25067 703 aa5.61□□□□□ -1.51
COLCA1-205ENST00000620864 NRGNQ92686 78 aa5.61□□□□□ -1.51
COLCA1-205ENST00000620864 SMAD5-AS1Q9Y6J3 95 aa5.61□□□□□ -1.51
COLCA1-205ENST00000620864 PLXNA4Q9HCM2 1894 aa5.61□□□□□ -1.51
COLCA1-205ENST00000620864 Q6Q795 121 aa5.61□□□□□ -1.51
COLCA1-205ENST00000620864 TM2D2Q9BX73 214 aa5.61□□□□□ -1.51
COLCA1-205ENST00000620864 DENND4CQ5VZ89 1909 aa5.61□□□□□ -1.51
COLCA1-205ENST00000620864 COX7BP24311 80 aa5.61□□□□□ -1.51
COLCA1-205ENST00000620864 C9orf66Q5T8R8 295 aa5.61□□□□□ -1.51
COLCA1-205ENST00000620864 CCDC179H3BU77 68 aa5.61□□□□□ -1.51
COLCA1-205ENST00000620864 A0A087WV48 116 aa5.61□□□□□ -1.51
COLCA1-205ENST00000620864 BLCAPP62952 87 aa5.61□□□□□ -1.51
COLCA1-205ENST00000620864 TEX36Q5VZQ5 186 aa5.61□□□□□ -1.51
COLCA1-205ENST00000620864 SIRPDQ9H106 197 aa5.61□□□□□ -1.51
COLCA1-205ENST00000620864 IGLC6P0CF74 106 aa5.6□□□□□ -1.51
COLCA1-205ENST00000620864 RNF138Q8WVD3 245 aa5.6□□□□□ -1.51
COLCA1-205ENST00000620864 CSDC2Q9Y534 153 aaKnown RBP5.6□□□□□ -1.51
COLCA1-205ENST00000620864 DOPEY1Q5JWR5 2465 aa5.6□□□□□ -1.51
COLCA1-205ENST00000620864 NOTCH2Q04721 2471 aa5.6□□□□□ -1.51
COLCA1-205ENST00000620864 TRAV23DV6A0A075B6W5 121 aa5.6□□□□□ -1.51
COLCA1-205ENST00000620864 MT-ATP8P03928 68 aa5.6□□□□□ -1.51
COLCA1-205ENST00000620864 CTRLP40313 264 aa5.6□□□□□ -1.51
COLCA1-205ENST00000620864 NUP210LQ5VU65 1888 aa5.6□□□□□ -1.51
COLCA1-205ENST00000620864 RPL18AQ02543 176 aaKnown RBP5.6□□□□□ -1.51
COLCA1-205ENST00000620864 IGHV3-38A0A0C4DH36 116 aa5.6□□□□□ -1.51
COLCA1-205ENST00000620864 A0A0J9YY99 117 aa5.6□□□□□ -1.51
COLCA1-205ENST00000620864 IGKV1-39P01597 117 aa5.6□□□□□ -1.51
COLCA1-205ENST00000620864 IGKV1D-39P04432 117 aa5.6□□□□□ -1.51
COLCA1-205ENST00000620864 CLPSL2Q6UWE3 100 aa5.6□□□□□ -1.51
COLCA1-205ENST00000620864 FLVCR1-AS1Q8TAF5 88 aa5.6□□□□□ -1.51
COLCA1-205ENST00000620864 IGHV4-28A0A0C4DH34 117 aa5.6□□□□□ -1.51
COLCA1-205ENST00000620864 HOXB4P17483 251 aaPredicted RBP5.6□□□□□ -1.51
COLCA1-205ENST00000620864 SERP1Q9Y6X1 66 aa5.6□□□□□ -1.51
COLCA1-205ENST00000620864 IGKV1-6A0A0C4DH72 117 aa5.6□□□□□ -1.51
COLCA1-205ENST00000620864 COX7CP15954 63 aa5.6□□□□□ -1.51
COLCA1-205ENST00000620864 B9D2Q9BPU9 175 aa5.6□□□□□ -1.51
COLCA1-205ENST00000620864 MDFICQ9P1T7 246 aa5.6□□□□□ -1.51
COLCA1-205ENST00000620864 H0Y9J4 135 aa5.59□□□□□ -1.51
COLCA1-205ENST00000620864 PMAIP1Q13794 54 aa5.59□□□□□ -1.51
COLCA1-205ENST00000620864 ZNF491Q8N8L2 437 aa5.59□□□□□ -1.51
COLCA1-205ENST00000620864 FAM19A3Q7Z5A8 133 aa5.59□□□□□ -1.51
COLCA1-205ENST00000620864 EML5Q05BV3 1969 aa5.59□□□□□ -1.51
COLCA1-205ENST00000620864 TCL1BO95988 128 aa5.59□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms