RNA–Protein interactions for RNA: ENST00000618771.1

TRAF4-217, Transcript of TNF receptor associated factor 4, humanhuman

TSL 5 BASIC

Gene TRAF4, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-217ENST00000618771 ZFP82Q8N141 532 aa14.74□□□□□ -0.05
TRAF4-217ENST00000618771 C14orf178Q8N769 122 aaPredicted RBP14.74□□□□□ -0.05
TRAF4-217ENST00000618771 MANBALQ9NQG1 85 aa14.74□□□□□ -0.05
TRAF4-217ENST00000618771 A0A087WTM6 91 aa14.73□□□□□ -0.05
TRAF4-217ENST00000618771 RAB5CP51148 216 aa14.73□□□□□ -0.05
TRAF4-217ENST00000618771 SFRP2Q96HF1 295 aa14.73□□□□□ -0.05
TRAF4-217ENST00000618771 MLST8Q9BVC4 326 aa14.73□□□□□ -0.05
TRAF4-217ENST00000618771 PGPEP1Q9NXJ5 209 aa14.73□□□□□ -0.05
TRAF4-217ENST00000618771 GNG13Q9P2W3 67 aa14.73□□□□□ -0.05
TRAF4-217ENST00000618771 A0A087WWL8 130 aa14.72□□□□□ -0.05
TRAF4-217ENST00000618771 TRAV1-1A0A0B4J248 108 aa14.72□□□□□ -0.05
TRAF4-217ENST00000618771 CCL20P78556 96 aa14.72□□□□□ -0.05
TRAF4-217ENST00000618771 Q9UF83 564 aa14.72□□□□□ -0.05
TRAF4-217ENST00000618771 IBA57-AS1B1ANH7 110 aa14.71□□□□□ -0.05
TRAF4-217ENST00000618771 IGHV3-30P01768 117 aa14.71□□□□□ -0.05
TRAF4-217ENST00000618771 IGHV3-33P01772 117 aa14.71□□□□□ -0.05
TRAF4-217ENST00000618771 IGHV3-30-3P0DP02 117 aa14.71□□□□□ -0.05
TRAF4-217ENST00000618771 IGHV3-30-5P0DP03 117 aa14.71□□□□□ -0.05
TRAF4-217ENST00000618771 RPL19P84098 196 aaKnown RBP14.71□□□□□ -0.05
TRAF4-217ENST00000618771 FUSP35637 526 aaKnown RBP eCLIP14.7□□□□□ -0.06
TRAF4-217ENST00000618771 RPL35P42766 123 aaKnown RBP14.7□□□□□ -0.06
TRAF4-217ENST00000618771 PRR27Q6MZM9 219 aa14.7□□□□□ -0.06
TRAF4-217ENST00000618771 CDPF1Q6NVV7 123 aa14.7□□□□□ -0.06
TRAF4-217ENST00000618771 HERC1Q15751 4861 aa14.7□□□□□ -0.06
TRAF4-217ENST00000618771 TEX46H3BTG2 121 aa14.69□□□□□ -0.06
TRAF4-217ENST00000618771 CXCL1P09341 107 aa14.69□□□□□ -0.06
TRAF4-217ENST00000618771 SULT1A2P50226 295 aa14.69□□□□□ -0.06
TRAF4-217ENST00000618771 C11orf52Q96A22 123 aa14.69□□□□□ -0.06
TRAF4-217ENST00000618771 PSCAO43653 123 aa14.68□□□□□ -0.06
TRAF4-217ENST00000618771 DERL1Q9BUN8 251 aa14.68□□□□□ -0.06
TRAF4-217ENST00000618771 Q9HAA7 133 aa14.68□□□□□ -0.06
TRAF4-217ENST00000618771 A0A087WWC5 75 aa14.67□□□□□ -0.06
TRAF4-217ENST00000618771 C1QBP02746 253 aa14.67□□□□□ -0.06
TRAF4-217ENST00000618771 Q6ZNX1 250 aa14.67□□□□□ -0.06
TRAF4-217ENST00000618771 OR10AG1Q8NH19 301 aa14.67□□□□□ -0.06
TRAF4-217ENST00000618771 SLC51BQ86UW2 128 aa14.66□□□□□ -0.06
TRAF4-217ENST00000618771 Q8N3U1 123 aa14.66□□□□□ -0.06
TRAF4-217ENST00000618771 SNAI2O43623 268 aa14.65□□□□□ -0.06
TRAF4-217ENST00000618771 LAGE3Q14657 143 aa14.65□□□□□ -0.06
TRAF4-217ENST00000618771 CENPWQ5EE01 88 aa14.65□□□□□ -0.06
TRAF4-217ENST00000618771 TRBV10-1A0A0K0K1A3 114 aa14.64□□□□□ -0.07
TRAF4-217ENST00000618771 OR5AL1P0C617 328 aa14.64□□□□□ -0.07
TRAF4-217ENST00000618771 SSBP4Q9BWG4 385 aaPredicted RBP14.64□□□□□ -0.07
TRAF4-217ENST00000618771 MEF2BQ02080 365 aaPredicted RBP14.63□□□□□ -0.07
TRAF4-217ENST00000618771 MUC21A0A0G2JKD1 596 aa14.62□□□□□ -0.07
TRAF4-217ENST00000618771 MUC21A0A140T8X8 626 aa14.62□□□□□ -0.07
TRAF4-217ENST00000618771 IFNA1P01562 189 aa14.62□□□□□ -0.07
TRAF4-217ENST00000618771 RPL36AP83881 106 aaKnown RBP14.62□□□□□ -0.07
TRAF4-217ENST00000618771 ZNF56Q15929 161 aa14.62□□□□□ -0.07
TRAF4-217ENST00000618771 SPANXN1Q5VSR9 72 aa14.62□□□□□ -0.07
TRAF4-217ENST00000618771 RPL36ALQ969Q0 106 aaKnown RBP14.62□□□□□ -0.07
TRAF4-217ENST00000618771 LRCOL1A6NCL2 159 aa14.61□□□□□ -0.07
TRAF4-217ENST00000618771 PDE6DO43924 150 aa14.61□□□□□ -0.07
TRAF4-217ENST00000618771 RAB4BP61018 213 aa14.61□□□□□ -0.07
TRAF4-217ENST00000618771 AKAP14Q86UN6 197 aa14.61□□□□□ -0.07
TRAF4-217ENST00000618771 TRBV7-3A0A075B6L6 115 aa14.6□□□□□ -0.07
TRAF4-217ENST00000618771 RAB19A4D1S5 217 aa14.6□□□□□ -0.07
TRAF4-217ENST00000618771 IGLV2-8P01709 118 aa14.6□□□□□ -0.07
TRAF4-217ENST00000618771 BCL2P10415 239 aa14.6□□□□□ -0.07
TRAF4-217ENST00000618771 GNG4P50150 75 aa14.6□□□□□ -0.07
TRAF4-217ENST00000618771 DAZ4Q86SG3 579 aaKnown RBP14.6□□□□□ -0.07
TRAF4-217ENST00000618771 DAZ3Q9NR90 486 aaKnown RBP14.6□□□□□ -0.07
TRAF4-217ENST00000618771 DMBT1Q9UGM3 2413 aaPredicted RBP14.59□□□□□ -0.07
TRAF4-217ENST00000618771 UBE2D3P61077 147 aa14.59□□□□□ -0.07
TRAF4-217ENST00000618771 SSTP61278 116 aa14.59□□□□□ -0.07
TRAF4-217ENST00000618771 UBE2D2P62837 147 aa14.59□□□□□ -0.07
TRAF4-217ENST00000618771 TOR2AQ5JU69 321 aa14.59□□□□□ -0.07
TRAF4-217ENST00000618771 OR10G8Q8NGN5 311 aa14.59□□□□□ -0.07
TRAF4-217ENST00000618771 DAZAP1Q96EP5 407 aaKnown RBP14.59□□□□□ -0.07
TRAF4-217ENST00000618771 SMIM12Q96EX1 92 aa14.59□□□□□ -0.07
TRAF4-217ENST00000618771 TM2D2Q9BX73 214 aa14.59□□□□□ -0.07
TRAF4-217ENST00000618771 MED9Q9NWA0 146 aa14.59□□□□□ -0.07
TRAF4-217ENST00000618771 URGCP-MRPS24S4R325 110 aa14.59□□□□□ -0.07
TRAF4-217ENST00000618771 hCG_2014768A0A024R1R8 64 aa14.58□□□□□ -0.08
TRAF4-217ENST00000618771 TRAV8-3A0A0A6YYJ7 113 aa14.58□□□□□ -0.08
TRAF4-217ENST00000618771 EPM2AB3EWF7 344 aa14.58□□□□□ -0.08
TRAF4-217ENST00000618771 KRTAP10-1P60331 282 aa14.58□□□□□ -0.08
TRAF4-217ENST00000618771 NIT1Q86X76 327 aa14.58□□□□□ -0.08
TRAF4-217ENST00000618771 C9orf62Q8N4C0 152 aa14.58□□□□□ -0.08
TRAF4-217ENST00000618771 GZMBP10144 247 aa14.57□□□□□ -0.08
TRAF4-217ENST00000618771 RPS20P60866 119 aaKnown RBP14.57□□□□□ -0.08
TRAF4-217ENST00000618771 OR2D3Q8NGH3 330 aa14.57□□□□□ -0.08
TRAF4-217ENST00000618771 AP1S3Q96PC3 154 aa14.57□□□□□ -0.08
TRAF4-217ENST00000618771 VAX2Q9UIW0 290 aa14.57□□□□□ -0.08
TRAF4-217ENST00000618771 TRBV20OR9-2A0A075B6H5 130 aa14.56□□□□□ -0.08
TRAF4-217ENST00000618771 C19orf71A6NCJ1 209 aa14.56□□□□□ -0.08
TRAF4-217ENST00000618771 F5H697 171 aa14.56□□□□□ -0.08
TRAF4-217ENST00000618771 GCSHP23434 173 aa14.56□□□□□ -0.08
TRAF4-217ENST00000618771 FER1L6-AS1Q8NA97 138 aa14.56□□□□□ -0.08
TRAF4-217ENST00000618771 NEXN-AS1Q8NBZ9 246 aa14.56□□□□□ -0.08
TRAF4-217ENST00000618771 NTN5Q8WTR8 489 aaPredicted RBP14.56□□□□□ -0.08
TRAF4-217ENST00000618771 IGLV5-52A0A0A0MRZ9 124 aa14.55□□□□□ -0.08
TRAF4-217ENST00000618771 SMIM17P0DL12 118 aa14.55□□□□□ -0.08
TRAF4-217ENST00000618771 TAGLN2P37802 199 aaKnown RBP14.55□□□□□ -0.08
TRAF4-217ENST00000618771 Q8N814 137 aa14.55□□□□□ -0.08
TRAF4-217ENST00000618771 TPPP3Q9BW30 176 aa14.55□□□□□ -0.08
TRAF4-217ENST00000618771 RBFOX3A6NFN3 312 aa14.54□□□□□ -0.08
TRAF4-217ENST00000618771 P01737 135 aa14.54□□□□□ -0.08
TRAF4-217ENST00000618771 IGLC6P0CF74 106 aa14.54□□□□□ -0.08
TRAF4-217ENST00000618771 BIN3Q9NQY0 253 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms