RNA–Protein interactions for RNA: ENST00000618533.4

RPP40-207, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 5 BASIC

Gene RPP40, Length 1,056 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-207ENST00000618533 LINC01551Q86U37 167 aa10.78□□□□□ -0.68
RPP40-207ENST00000618533 JPT2Q9H910 190 aa10.78□□□□□ -0.68
RPP40-207ENST00000618533 FAM74A4Q5TZK3 123 aa10.77□□□□□ -0.69
RPP40-207ENST00000618533 WDR73Q6P4I2 378 aa10.77□□□□□ -0.69
RPP40-207ENST00000618533 LYPD5Q6UWN5 251 aa10.77□□□□□ -0.69
RPP40-207ENST00000618533 AP1S3Q96PC3 154 aa10.77□□□□□ -0.69
RPP40-207ENST00000618533 SAMD10Q9BYL1 202 aa10.77□□□□□ -0.69
RPP40-207ENST00000618533 RNASE7Q9H1E1 156 aaKnown RBP10.77□□□□□ -0.69
RPP40-207ENST00000618533 GATCO43716 136 aaKnown RBP10.76□□□□□ -0.69
RPP40-207ENST00000618533 GZMBP10144 247 aa10.76□□□□□ -0.69
RPP40-207ENST00000618533 CTRLP40313 264 aa10.76□□□□□ -0.69
RPP40-207ENST00000618533 ERVFC1-1P60608 527 aa10.76□□□□□ -0.69
RPP40-207ENST00000618533 TMEM241Q24JQ0 296 aa10.76□□□□□ -0.69
RPP40-207ENST00000618533 CLLU1Q5K131 121 aa10.76□□□□□ -0.69
RPP40-207ENST00000618533 Q6ZR54 194 aa10.76□□□□□ -0.69
RPP40-207ENST00000618533 Q9H8V8 135 aa10.76□□□□□ -0.69
RPP40-207ENST00000618533 A0A087WWL8 130 aa10.75□□□□□ -0.69
RPP40-207ENST00000618533 TRBV10-1A0A0K0K1A3 114 aa10.75□□□□□ -0.69
RPP40-207ENST00000618533 A8MWL6 223 aa10.75□□□□□ -0.69
RPP40-207ENST00000618533 SMIM17P0DL12 118 aa10.75□□□□□ -0.69
RPP40-207ENST00000618533 RAB4BP61018 213 aa10.75□□□□□ -0.69
RPP40-207ENST00000618533 TTC32Q5I0X7 151 aa10.75□□□□□ -0.69
RPP40-207ENST00000618533 TPPP3Q9BW30 176 aa10.75□□□□□ -0.69
RPP40-207ENST00000618533 CNFNQ9BYD5 112 aa10.75□□□□□ -0.69
RPP40-207ENST00000618533 OSTCQ9NRP0 149 aa10.75□□□□□ -0.69
RPP40-207ENST00000618533 NAT8Q9UHE5 227 aa10.75□□□□□ -0.69
RPP40-207ENST00000618533 IGLV2-18A0A075B6J9 118 aa10.74□□□□□ -0.69
RPP40-207ENST00000618533 LOC100131303A0A0U1RQF7 123 aa10.74□□□□□ -0.69
RPP40-207ENST00000618533 NBDYA0A0U1RRE5 68 aa10.74□□□□□ -0.69
RPP40-207ENST00000618533 TRGC1P0CF51 173 aa10.74□□□□□ -0.69
RPP40-207ENST00000618533 SOHLH1Q5JUK2 328 aa10.74□□□□□ -0.69
RPP40-207ENST00000618533 Q6ZSN1 163 aa10.74□□□□□ -0.69
RPP40-207ENST00000618533 FAM231BA6NCW3 169 aa10.73□□□□□ -0.69
RPP40-207ENST00000618533 C9JQL5 133 aa10.73□□□□□ -0.69
RPP40-207ENST00000618533 LINC00694P0DN24 101 aa10.73□□□□□ -0.69
RPP40-207ENST00000618533 BTF3P20290 206 aaKnown RBP10.73□□□□□ -0.69
RPP40-207ENST00000618533 SRSF3P84103 164 aaKnown RBP10.73□□□□□ -0.69
RPP40-207ENST00000618533 LYZL1Q6UWQ5 148 aa10.73□□□□□ -0.69
RPP40-207ENST00000618533 C15orf54Q8N8G6 183 aa10.73□□□□□ -0.69
RPP40-207ENST00000618533 MUC21A0A0G2JKD1 596 aa10.72□□□□□ -0.69
RPP40-207ENST00000618533 MUC21A0A140T8X8 626 aa10.72□□□□□ -0.69
RPP40-207ENST00000618533 K7EP13 123 aa10.72□□□□□ -0.69
RPP40-207ENST00000618533 SIVA1O15304 175 aa10.72□□□□□ -0.69
RPP40-207ENST00000618533 FOXA3P55318 350 aaPredicted RBP10.72□□□□□ -0.69
RPP40-207ENST00000618533 ZNF56Q15929 161 aa10.72□□□□□ -0.69
RPP40-207ENST00000618533 C14orf178Q8N769 122 aaPredicted RBP10.72□□□□□ -0.69
RPP40-207ENST00000618533 ATP6V0E2Q8NHE4 81 aa10.72□□□□□ -0.69
RPP40-207ENST00000618533 GFRA4Q9GZZ7 299 aa10.72□□□□□ -0.69
RPP40-207ENST00000618533 M0R2N4 97 aa10.71□□□□□ -0.69
RPP40-207ENST00000618533 RPL23P62829 140 aaKnown RBP10.71□□□□□ -0.69
RPP40-207ENST00000618533 IFITM2Q01629 132 aa10.71□□□□□ -0.69
RPP40-207ENST00000618533 ISOC2Q96AB3 205 aa10.71□□□□□ -0.69
RPP40-207ENST00000618533 GTSF1LQ9H1H1 148 aa10.71□□□□□ -0.69
RPP40-207ENST00000618533 KIF25-AS1Q9Y6Z4 181 aa10.71□□□□□ -0.69
RPP40-207ENST00000618533 GAGE12JA6NER3 117 aa10.7□□□□□ -0.7
RPP40-207ENST00000618533 NTF3P20783 257 aa10.7□□□□□ -0.7
RPP40-207ENST00000618533 RPL36AP83881 106 aaKnown RBP10.7□□□□□ -0.7
RPP40-207ENST00000618533 GAGE1Q13065 139 aa10.7□□□□□ -0.7
RPP40-207ENST00000618533 GAGE4Q13068 117 aa10.7□□□□□ -0.7
RPP40-207ENST00000618533 GAGE5Q13069 117 aa10.7□□□□□ -0.7
RPP40-207ENST00000618533 GAGE13Q4V321 117 aa10.7□□□□□ -0.7
RPP40-207ENST00000618533 LINC00336Q6ZUF6 198 aa10.7□□□□□ -0.7
RPP40-207ENST00000618533 OR10G8Q8NGN5 311 aa10.7□□□□□ -0.7
RPP40-207ENST00000618533 TSKUQ8WUA8 353 aa10.7□□□□□ -0.7
RPP40-207ENST00000618533 GTSF1Q8WW33 167 aa10.7□□□□□ -0.7
RPP40-207ENST00000618533 RPL36ALQ969Q0 106 aaKnown RBP10.7□□□□□ -0.7
RPP40-207ENST00000618533 TRBV7-3A0A075B6L6 115 aa10.69□□□□□ -0.7
RPP40-207ENST00000618533 A0A087WWC5 75 aa10.69□□□□□ -0.7
RPP40-207ENST00000618533 TRAV8-6A0A0B4J262 113 aa10.69□□□□□ -0.7
RPP40-207ENST00000618533 F5H697 171 aa10.69□□□□□ -0.7
RPP40-207ENST00000618533 H7C1H1 209 aa10.69□□□□□ -0.7
RPP40-207ENST00000618533 SSTP61278 116 aa10.69□□□□□ -0.7
RPP40-207ENST00000618533 ADIRFQ15847 76 aa10.69□□□□□ -0.7
RPP40-207ENST00000618533 LELP1Q5T871 98 aa10.69□□□□□ -0.7
RPP40-207ENST00000618533 BORCS7Q96B45 105 aa10.69□□□□□ -0.7
RPP40-207ENST00000618533 DPH3P1Q9H4G8 78 aa10.69□□□□□ -0.7
RPP40-207ENST00000618533 TRAV9-2A0A087WT02 112 aa10.68□□□□□ -0.7
RPP40-207ENST00000618533 LINC00315P59091 139 aa10.68□□□□□ -0.7
RPP40-207ENST00000618533 TWIST1Q15672 202 aa10.68□□□□□ -0.7
RPP40-207ENST00000618533 C1orf134Q5TEV5 83 aa10.68□□□□□ -0.7
RPP40-207ENST00000618533 SMIM15Q7Z3B0 74 aa10.68□□□□□ -0.7
RPP40-207ENST00000618533 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.68□□□□□ -0.7
RPP40-207ENST00000618533 MSRB1Q9NZV6 116 aa10.68□□□□□ -0.7
RPP40-207ENST00000618533 V9GYV3 84 aa10.68□□□□□ -0.7
RPP40-207ENST00000618533 DNAH10OSP0CZ25 163 aa10.67□□□□□ -0.7
RPP40-207ENST00000618533 EVI2AP22794 236 aa10.67□□□□□ -0.7
RPP40-207ENST00000618533 UQCC3Q6UW78 93 aa10.67□□□□□ -0.7
RPP40-207ENST00000618533 HIGD1CA8MV81 97 aa10.66□□□□□ -0.7
RPP40-207ENST00000618533 UBE2D3P61077 147 aa10.66□□□□□ -0.7
RPP40-207ENST00000618533 UBE2D2P62837 147 aa10.66□□□□□ -0.7
RPP40-207ENST00000618533 PNRC1Q12796 327 aaPredicted RBP10.66□□□□□ -0.7
RPP40-207ENST00000618533 OR10J3Q5JRS4 329 aa10.66□□□□□ -0.7
RPP40-207ENST00000618533 C6orf223Q8N319 242 aa10.66□□□□□ -0.7
RPP40-207ENST00000618533 C10orf126Q8N4M7 172 aa10.66□□□□□ -0.7
RPP40-207ENST00000618533 DNAJC30Q96LL9 226 aa10.66□□□□□ -0.7
RPP40-207ENST00000618533 IGHV3-38A0A0C4DH36 116 aa10.65□□□□□ -0.7
RPP40-207ENST00000618533 A0A1B0GUT8 65 aa10.65□□□□□ -0.7
RPP40-207ENST00000618533 MGPP08493 103 aa10.65□□□□□ -0.7
RPP40-207ENST00000618533 WFDC10BQ8IUB3 73 aa10.65□□□□□ -0.7
RPP40-207ENST00000618533 NEXN-AS1Q8NBZ9 246 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms