RNA–Protein interactions for RNA: ENST00000617422.4

CNTNAP3B-212, Transcript of contactin associated protein like 3B, humanhuman

TSL 2 BASIC

Gene CNTNAP3B, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-212ENST00000617422 TEP1Q99973 2627 aaKnown RBP15.25■□□□□ 0.03
CNTNAP3B-212ENST00000617422 H3BVH4 76 aa15.25■□□□□ 0.03
CNTNAP3B-212ENST00000617422 GNRH2O43555 120 aa15.25■□□□□ 0.03
CNTNAP3B-212ENST00000617422 RBMY1BA6NDE4 496 aaKnown RBP15.24■□□□□ 0.03
CNTNAP3B-212ENST00000617422 RBMY1EA6NEQ0 496 aaKnown RBP15.24■□□□□ 0.03
CNTNAP3B-212ENST00000617422 PPBPP02775 128 aa15.24■□□□□ 0.03
CNTNAP3B-212ENST00000617422 RBMY1DP0C7P1 496 aaKnown RBP15.24■□□□□ 0.03
CNTNAP3B-212ENST00000617422 AMMECR1LQ6DCA0 310 aa15.24■□□□□ 0.03
CNTNAP3B-212ENST00000617422 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.24■□□□□ 0.03
CNTNAP3B-212ENST00000617422 IFI27L1Q96BM0 104 aa15.24■□□□□ 0.03
CNTNAP3B-212ENST00000617422 SPAG8Q99932 426 aaPredicted RBP15.24■□□□□ 0.03
CNTNAP3B-212ENST00000617422 ATRQ13535 2644 aa15.24■□□□□ 0.03
CNTNAP3B-212ENST00000617422 SIVA1O15304 175 aa15.24■□□□□ 0.03
CNTNAP3B-212ENST00000617422 ANKRD39Q53RE8 183 aa15.24■□□□□ 0.03
CNTNAP3B-212ENST00000617422 BOD1L2Q8IYS8 172 aa15.24■□□□□ 0.03
CNTNAP3B-212ENST00000617422 SNAI2O43623 268 aa15.23■□□□□ 0.03
CNTNAP3B-212ENST00000617422 CACNG7P62955 275 aa15.23■□□□□ 0.03
CNTNAP3B-212ENST00000617422 ODF3L2Q3SX64 289 aa15.23■□□□□ 0.03
CNTNAP3B-212ENST00000617422 NDUFA11Q86Y39 141 aa15.23■□□□□ 0.03
CNTNAP3B-212ENST00000617422 C7orf71A4D174 169 aa15.22■□□□□ 0.03
CNTNAP3B-212ENST00000617422 H3BMM0 161 aa15.22■□□□□ 0.03
CNTNAP3B-212ENST00000617422 NPYP01303 97 aa15.22■□□□□ 0.03
CNTNAP3B-212ENST00000617422 HLA-DRB4P13762 266 aa15.22■□□□□ 0.03
CNTNAP3B-212ENST00000617422 ERASQ7Z444 233 aa15.22■□□□□ 0.03
CNTNAP3B-212ENST00000617422 HLA-DRB4X5D2U9 266 aa15.22■□□□□ 0.03
CNTNAP3B-212ENST00000617422 DUSP14O95147 198 aaKnown RBP15.22■□□□□ 0.03
CNTNAP3B-212ENST00000617422 LEPP41159 167 aa15.22■□□□□ 0.03
CNTNAP3B-212ENST00000617422 FXYD7P58549 80 aa15.22■□□□□ 0.03
CNTNAP3B-212ENST00000617422 A6NDN8 102 aa15.21■□□□□ 0.03
CNTNAP3B-212ENST00000617422 A8MTW9 85 aa15.21■□□□□ 0.03
CNTNAP3B-212ENST00000617422 SAP30O75446 220 aa15.21■□□□□ 0.03
CNTNAP3B-212ENST00000617422 MAP1LC3AQ9H492 121 aa15.21■□□□□ 0.03
CNTNAP3B-212ENST00000617422 TRAV25A0A0B4J276 109 aa15.21■□□□□ 0.02
CNTNAP3B-212ENST00000617422 LINC01546A6NGU7 62 aa15.21■□□□□ 0.02
CNTNAP3B-212ENST00000617422 MUC4Q99102 2169 aa15.21■□□□□ 0.02
CNTNAP3B-212ENST00000617422 RBMY1A1P0DJD3 496 aaKnown RBP15.2■□□□□ 0.02
CNTNAP3B-212ENST00000617422 RBMY1CP0DJD4 496 aa15.2■□□□□ 0.02
CNTNAP3B-212ENST00000617422 RNASE3P12724 160 aaKnown RBP15.2■□□□□ 0.02
CNTNAP3B-212ENST00000617422 HSD52Q0P140 79 aa15.2■□□□□ 0.02
CNTNAP3B-212ENST00000617422 RBMY1FQ15415 496 aaKnown RBP15.2■□□□□ 0.02
CNTNAP3B-212ENST00000617422 RNF185Q96GF1 192 aa15.2■□□□□ 0.02
CNTNAP3B-212ENST00000617422 SPATA3Q8NHX4 192 aa15.19■□□□□ 0.02
CNTNAP3B-212ENST00000617422 CST9LQ9H4G1 147 aa15.19■□□□□ 0.02
CNTNAP3B-212ENST00000617422 H3BRM9 83 aa15.19■□□□□ 0.02
CNTNAP3B-212ENST00000617422 TRAV8-6A0A0B4J262 113 aa15.18■□□□□ 0.02
CNTNAP3B-212ENST00000617422 SMKR1H3BMG3 65 aa15.18■□□□□ 0.02
CNTNAP3B-212ENST00000617422 GAS8-AS1O95177 125 aa15.18■□□□□ 0.02
CNTNAP3B-212ENST00000617422 IGLV1-51P01701 117 aa15.18■□□□□ 0.02
CNTNAP3B-212ENST00000617422 NXT2Q9NPJ8 142 aaKnown RBP15.18■□□□□ 0.02
CNTNAP3B-212ENST00000617422 IGHV4-4A0A075B6R2 117 aa15.18■□□□□ 0.02
CNTNAP3B-212ENST00000617422 EVI2AP22794 236 aa15.18■□□□□ 0.02
CNTNAP3B-212ENST00000617422 ASIPP42127 132 aa15.18■□□□□ 0.02
CNTNAP3B-212ENST00000617422 C21orf62-AS1Q17RA5 79 aa15.17■□□□□ 0.02
CNTNAP3B-212ENST00000617422 AP1S3Q96PC3 154 aa15.17■□□□□ 0.02
CNTNAP3B-212ENST00000617422 OCIAD2Q56VL3 154 aa15.17■□□□□ 0.02
CNTNAP3B-212ENST00000617422 FAM159AQ6UWV7 190 aa15.17■□□□□ 0.02
CNTNAP3B-212ENST00000617422 LINC00482Q8N8I6 264 aa15.17■□□□□ 0.02
CNTNAP3B-212ENST00000617422 TRRAPQ9Y4A5 3859 aa15.16■□□□□ 0.02
CNTNAP3B-212ENST00000617422 S100A4P26447 101 aaKnown RBP15.16■□□□□ 0.02
CNTNAP3B-212ENST00000617422 C9orf118A6NHY6 69 aa15.15■□□□□ 0.02
CNTNAP3B-212ENST00000617422 FCER1GP30273 86 aa15.15■□□□□ 0.02
CNTNAP3B-212ENST00000617422 SPANXN1Q5VSR9 72 aa15.15■□□□□ 0.02
CNTNAP3B-212ENST00000617422 GTF2H5Q6ZYL4 71 aa15.15■□□□□ 0.02
CNTNAP3B-212ENST00000617422 M0R381 172 aa15.15■□□□□ 0.02
CNTNAP3B-212ENST00000617422 GAGE12BA1L429 117 aa15.14■□□□□ 0.01
CNTNAP3B-212ENST00000617422 GAGE10A6NGK3 116 aa15.14■□□□□ 0.01
CNTNAP3B-212ENST00000617422 CD7P09564 240 aa15.14■□□□□ 0.01
CNTNAP3B-212ENST00000617422 TNFRSF6BO95407 300 aa15.14■□□□□ 0.01
CNTNAP3B-212ENST00000617422 RNF151Q2KHN1 245 aa15.14■□□□□ 0.01
CNTNAP3B-212ENST00000617422 Q8N1Y9 231 aa15.14■□□□□ 0.01
CNTNAP3B-212ENST00000617422 MDFICQ9P1T7 246 aa15.14■□□□□ 0.01
CNTNAP3B-212ENST00000617422 PF4P02776 101 aa15.13■□□□□ 0.01
CNTNAP3B-212ENST00000617422 FBN1P35555 2871 aaKnown RBP15.13■□□□□ 0.01
CNTNAP3B-212ENST00000617422 PRM2P04554 102 aa15.12■□□□□ 0.01
CNTNAP3B-212ENST00000617422 MED14OSP0DP75 135 aa15.12■□□□□ 0.01
CNTNAP3B-212ENST00000617422 PHLDA3Q9Y5J5 127 aa15.12■□□□□ 0.01
CNTNAP3B-212ENST00000617422 IGHV3-16A0A0C4DH30 117 aa15.12■□□□□ 0.01
CNTNAP3B-212ENST00000617422 GATA1P15976 413 aaPredicted RBP15.12■□□□□ 0.01
CNTNAP3B-212ENST00000617422 NMUP48645 174 aa15.12■□□□□ 0.01
CNTNAP3B-212ENST00000617422 CITED1Q99966 193 aa15.12■□□□□ 0.01
CNTNAP3B-212ENST00000617422 WFDC10AQ9H1F0 79 aa15.12■□□□□ 0.01
CNTNAP3B-212ENST00000617422 ZMAT4Q9H898 229 aa15.12■□□□□ 0.01
CNTNAP3B-212ENST00000617422 DKK2Q9UBU2 259 aa15.12■□□□□ 0.01
CNTNAP3B-212ENST00000617422 NOTCH3Q9UM47 2321 aa15.12■□□□□ 0.01
CNTNAP3B-212ENST00000617422 IGHV1OR15-1A0A075B7D0 117 aa15.11■□□□□ 0.01
CNTNAP3B-212ENST00000617422 OR11H12B2RN74 326 aa15.11■□□□□ 0.01
CNTNAP3B-212ENST00000617422 K7ERU9 68 aa15.11■□□□□ 0.01
CNTNAP3B-212ENST00000617422 UFSP1Q6NVU6 142 aa15.11■□□□□ 0.01
CNTNAP3B-212ENST00000617422 ATP5LO75964 103 aa15.1■□□□□ 0.01
CNTNAP3B-212ENST00000617422 Q8N8P6 123 aa15.1■□□□□ 0.01
CNTNAP3B-212ENST00000617422 C19orf73Q9NVV2 129 aa15.1■□□□□ 0.01
CNTNAP3B-212ENST00000617422 TRAV26-2A0A0B4J265 109 aa15.09■□□□□ 0.01
CNTNAP3B-212ENST00000617422 NXPH4O95158 308 aa15.09■□□□□ 0.01
CNTNAP3B-212ENST00000617422 ODF1Q14990 250 aa15.09■□□□□ 0.01
CNTNAP3B-212ENST00000617422 BEAN1Q3B7T3 259 aa15.09■□□□□ 0.01
CNTNAP3B-212ENST00000617422 SMIM15Q7Z3B0 74 aa15.09■□□□□ 0.01
CNTNAP3B-212ENST00000617422 PCP2Q8IVA1 136 aa15.09■□□□□ 0.01
CNTNAP3B-212ENST00000617422 C18orf15Q96N68 181 aa15.09■□□□□ 0.01
CNTNAP3B-212ENST00000617422 HIGD1BQ9P298 99 aa15.09■□□□□ 0.01
CNTNAP3B-212ENST00000617422 C9orf85Q96MD7 179 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 277.3 ms