RNA–Protein interactions for RNA: ENST00000616887.1

PCDHGA9-202, Transcript of protocadherin gamma subfamily A, 9, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA9, Length 2,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9-202ENST00000616887 LOC107984156A0A0G2JMH3 177 aa8.68□□□□□ -1.02
PCDHGA9-202ENST00000616887 GAGE12JA6NER3 117 aa8.68□□□□□ -1.02
PCDHGA9-202ENST00000616887 HOXA3O43365 443 aaPredicted RBP8.68□□□□□ -1.02
PCDHGA9-202ENST00000616887 GAGE7O76087 117 aa8.68□□□□□ -1.02
PCDHGA9-202ENST00000616887 DPM2O94777 84 aa8.68□□□□□ -1.02
PCDHGA9-202ENST00000616887 GAGE12FP0CL80 117 aa8.68□□□□□ -1.02
PCDHGA9-202ENST00000616887 GAGE12GP0CL81 117 aa8.68□□□□□ -1.02
PCDHGA9-202ENST00000616887 GAGE12IP0CL82 117 aa8.68□□□□□ -1.02
PCDHGA9-202ENST00000616887 EDN2P20800 178 aa8.68□□□□□ -1.02
PCDHGA9-202ENST00000616887 GAGE4Q13068 117 aa8.68□□□□□ -1.02
PCDHGA9-202ENST00000616887 PSMG4Q5JS54 123 aa8.68□□□□□ -1.02
PCDHGA9-202ENST00000616887 ARL17AQ8IVW1 177 aa8.68□□□□□ -1.02
PCDHGA9-202ENST00000616887 IGHG2P01859 326 aa8.68□□□□□ -1.02
PCDHGA9-202ENST00000616887 ZFP2Q6ZN57 461 aa8.68□□□□□ -1.02
PCDHGA9-202ENST00000616887 LINC01356Q8N9X3 169 aa8.68□□□□□ -1.02
PCDHGA9-202ENST00000616887 SH2D1AO60880 128 aa8.67□□□□□ -1.02
PCDHGA9-202ENST00000616887 IGF1P05019 195 aa8.67□□□□□ -1.02
PCDHGA9-202ENST00000616887 DEFB1P60022 68 aa8.67□□□□□ -1.02
PCDHGA9-202ENST00000616887 PRR25Q96S07 402 aa8.67□□□□□ -1.02
PCDHGA9-202ENST00000616887 TRAV8-2A0A0B4J237 113 aa8.67□□□□□ -1.02
PCDHGA9-202ENST00000616887 TRBV6-1A0A0K0K1D8 114 aa8.67□□□□□ -1.02
PCDHGA9-202ENST00000616887 J3QLI3 93 aa8.67□□□□□ -1.02
PCDHGA9-202ENST00000616887 Q6ZQT7 251 aa8.67□□□□□ -1.02
PCDHGA9-202ENST00000616887 TMEM158Q8WZ71 300 aa8.67□□□□□ -1.02
PCDHGA9-202ENST00000616887 NOTCH2Q04721 2471 aa8.67□□□□□ -1.02
PCDHGA9-202ENST00000616887 TRBV7-3A0A075B6L6 115 aa8.67□□□□□ -1.02
PCDHGA9-202ENST00000616887 ZNF688P0C7X2 276 aa8.67□□□□□ -1.02
PCDHGA9-202ENST00000616887 TEN1Q86WV5 123 aa8.67□□□□□ -1.02
PCDHGA9-202ENST00000616887 METTL26Q96S19 204 aa8.67□□□□□ -1.02
PCDHGA9-202ENST00000616887 PDZD2O15018 2839 aa8.66□□□□□ -1.02
PCDHGA9-202ENST00000616887 PRRC2AP48634 2157 aaKnown RBP8.66□□□□□ -1.02
PCDHGA9-202ENST00000616887 IGKV3-7A0A075B6H7 116 aa8.66□□□□□ -1.02
PCDHGA9-202ENST00000616887 FABP5P3A8MUU1 101 aa8.66□□□□□ -1.02
PCDHGA9-202ENST00000616887 GAS8-AS1O95177 125 aa8.66□□□□□ -1.02
PCDHGA9-202ENST00000616887 CRIP2P52943 208 aaPredicted RBP8.66□□□□□ -1.02
PCDHGA9-202ENST00000616887 NDUFV3P56181 108 aaKnown RBP8.66□□□□□ -1.02
PCDHGA9-202ENST00000616887 TWIST1Q15672 202 aa8.66□□□□□ -1.02
PCDHGA9-202ENST00000616887 IL17RELQ6ZVW7 336 aa8.66□□□□□ -1.02
PCDHGA9-202ENST00000616887 MRPL35Q9NZE8 188 aaKnown RBP8.66□□□□□ -1.02
PCDHGA9-202ENST00000616887 MYO9AB2RTY4 2548 aa8.66□□□□□ -1.02
PCDHGA9-202ENST00000616887 LINC01549A6NIU2 74 aa8.66□□□□□ -1.02
PCDHGA9-202ENST00000616887 FAM223BA6NKX1 122 aa8.66□□□□□ -1.02
PCDHGA9-202ENST00000616887 H3BVH4 76 aa8.66□□□□□ -1.02
PCDHGA9-202ENST00000616887 FAM223AQ8IWN6 122 aa8.66□□□□□ -1.02
PCDHGA9-202ENST00000616887 ITPR3Q14573 2671 aa8.65□□□□□ -1.02
PCDHGA9-202ENST00000616887 RHODO00212 210 aa8.65□□□□□ -1.02
PCDHGA9-202ENST00000616887 GAGE2BQ13066 116 aa8.65□□□□□ -1.02
PCDHGA9-202ENST00000616887 GAGE2EQ4V326 116 aa8.65□□□□□ -1.02
PCDHGA9-202ENST00000616887 ZNF575Q86XF7 245 aa8.65□□□□□ -1.02
PCDHGA9-202ENST00000616887 RAX2Q96IS3 184 aa8.65□□□□□ -1.02
PCDHGA9-202ENST00000616887 DUX5Q96PT3 197 aa8.65□□□□□ -1.02
PCDHGA9-202ENST00000616887 GAGE2DQ9UEU5 116 aa8.65□□□□□ -1.02
PCDHGA9-202ENST00000616887 AKAP9Q99996 3911 aa8.65□□□□□ -1.02
PCDHGA9-202ENST00000616887 MAP1LC3AQ9H492 121 aa8.65□□□□□ -1.03
PCDHGA9-202ENST00000616887 HLA-DRB4P13762 266 aa8.64□□□□□ -1.03
PCDHGA9-202ENST00000616887 SRD5A1P18405 259 aa8.64□□□□□ -1.03
PCDHGA9-202ENST00000616887 C20orf173Q96LM9 149 aa8.64□□□□□ -1.03
PCDHGA9-202ENST00000616887 HLA-DRB4X5D2U9 266 aa8.64□□□□□ -1.03
PCDHGA9-202ENST00000616887 CR1P17927 2039 aa8.64□□□□□ -1.03
PCDHGA9-202ENST00000616887 TTC32Q5I0X7 151 aa8.64□□□□□ -1.03
PCDHGA9-202ENST00000616887 GPHB5Q86YW7 130 aa8.64□□□□□ -1.03
PCDHGA9-202ENST00000616887 VCX2Q9H322 139 aa8.64□□□□□ -1.03
PCDHGA9-202ENST00000616887 U3KQE9 123 aa8.64□□□□□ -1.03
PCDHGA9-202ENST00000616887 A0A087WX48 190 aa8.63□□□□□ -1.03
PCDHGA9-202ENST00000616887 TRAV4A0A0B4J268 109 aa8.63□□□□□ -1.03
PCDHGA9-202ENST00000616887 ATP5LO75964 103 aa8.63□□□□□ -1.03
PCDHGA9-202ENST00000616887 IGHV4-31P0DP07 118 aa8.63□□□□□ -1.03
PCDHGA9-202ENST00000616887 CYSRT1A8MQ03 144 aa8.63□□□□□ -1.03
PCDHGA9-202ENST00000616887 CFHR3Q02985 330 aa8.63□□□□□ -1.03
PCDHGA9-202ENST00000616887 ANKRD29Q8N6D5 301 aa8.63□□□□□ -1.03
PCDHGA9-202ENST00000616887 AGPAT4-IT1Q9H0P7 198 aa8.63□□□□□ -1.03
PCDHGA9-202ENST00000616887 FLNAP21333 2647 aaKnown RBP8.62□□□□□ -1.03
PCDHGA9-202ENST00000616887 A8MWV9 139 aa8.62□□□□□ -1.03
PCDHGA9-202ENST00000616887 TMEM262E9PQX1 116 aa8.62□□□□□ -1.03
PCDHGA9-202ENST00000616887 CRLF1O75462 422 aa8.62□□□□□ -1.03
PCDHGA9-202ENST00000616887 IGLV1-40P01703 118 aa8.62□□□□□ -1.03
PCDHGA9-202ENST00000616887 IFITM1P13164 125 aa8.62□□□□□ -1.03
PCDHGA9-202ENST00000616887 HIST2H2BDQ6DRA6 164 aa8.62□□□□□ -1.03
PCDHGA9-202ENST00000616887 FAM159AQ6UWV7 190 aa8.62□□□□□ -1.03
PCDHGA9-202ENST00000616887 MSRB1Q9NZV6 116 aa8.62□□□□□ -1.03
PCDHGA9-202ENST00000616887 MYMXA0A1B0GTQ4 84 aa8.62□□□□□ -1.03
PCDHGA9-202ENST00000616887 SNCGO76070 127 aa8.62□□□□□ -1.03
PCDHGA9-202ENST00000616887 GATA1P15976 413 aaPredicted RBP8.62□□□□□ -1.03
PCDHGA9-202ENST00000616887 Q96MF0 132 aa8.62□□□□□ -1.03
PCDHGA9-202ENST00000616887 C11orf21Q9P2W6 132 aa8.62□□□□□ -1.03
PCDHGA9-202ENST00000616887 NF1P21359 2839 aa8.61□□□□□ -1.03
PCDHGA9-202ENST00000616887 ACANP16112 2415 aa8.61□□□□□ -1.03
PCDHGA9-202ENST00000616887 ORM1P02763 201 aa8.61□□□□□ -1.03
PCDHGA9-202ENST00000616887 RPL11P62913 178 aaKnown RBP8.61□□□□□ -1.03
PCDHGA9-202ENST00000616887 C16orf92Q96LL3 132 aa8.61□□□□□ -1.03
PCDHGA9-202ENST00000616887 CITED2Q99967 270 aaPredicted RBP8.61□□□□□ -1.03
PCDHGA9-202ENST00000616887 SLC50A1Q9BRV3 221 aa8.61□□□□□ -1.03
PCDHGA9-202ENST00000616887 F6UB75 175 aa8.61□□□□□ -1.03
PCDHGA9-202ENST00000616887 M0QXV9 152 aa8.61□□□□□ -1.03
PCDHGA9-202ENST00000616887 TNFRSF6BO95407 300 aa8.61□□□□□ -1.03
PCDHGA9-202ENST00000616887 TCL1BO95988 128 aa8.61□□□□□ -1.03
PCDHGA9-202ENST00000616887 PRR9Q5T870 116 aa8.61□□□□□ -1.03
PCDHGA9-202ENST00000616887 KRTAP1-3Q8IUG1 177 aa8.6□□□□□ -1.03
PCDHGA9-202ENST00000616887 NDUFA4O00483 81 aa8.6□□□□□ -1.03
PCDHGA9-202ENST00000616887 COX8CQ7Z4L0 72 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms