RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 CLRN3Q8NCR9 226 aa10.49□□□□□ -0.73
UBXN1-218ENST00000616865 CTDSP1Q9GZU7 261 aa10.49□□□□□ -0.73
UBXN1-218ENST00000616865 GFRA4Q9GZZ7 299 aa10.49□□□□□ -0.73
UBXN1-218ENST00000616865 FAM231BA6NCW3 169 aa10.48□□□□□ -0.73
UBXN1-218ENST00000616865 RTL8CO15255 209 aa10.48□□□□□ -0.73
UBXN1-218ENST00000616865 C12orf74Q32Q52 190 aa10.48□□□□□ -0.73
UBXN1-218ENST00000616865 ZNF575Q86XF7 245 aa10.48□□□□□ -0.73
UBXN1-218ENST00000616865 OR10AG1Q8NH19 301 aa10.48□□□□□ -0.73
UBXN1-218ENST00000616865 RASL10AQ92737 203 aa10.48□□□□□ -0.73
UBXN1-218ENST00000616865 PTH2Q96A98 100 aa10.48□□□□□ -0.73
UBXN1-218ENST00000616865 SCRT2Q9NQ03 307 aa10.48□□□□□ -0.73
UBXN1-218ENST00000616865 RPS10P5Q9NQ39 176 aa10.48□□□□□ -0.73
UBXN1-218ENST00000616865 NAT8BQ9UHF3 227 aa10.48□□□□□ -0.73
UBXN1-218ENST00000616865 C7orf77A4D0Y5 90 aa10.47□□□□□ -0.73
UBXN1-218ENST00000616865 HIGD1CA8MV81 97 aa10.47□□□□□ -0.73
UBXN1-218ENST00000616865 ATP5G1P05496 136 aa10.47□□□□□ -0.73
UBXN1-218ENST00000616865 CTRLP40313 264 aa10.47□□□□□ -0.73
UBXN1-218ENST00000616865 DMRTA1Q5VZB9 504 aa10.47□□□□□ -0.73
UBXN1-218ENST00000616865 OR4C5Q8NGB2 326 aa10.47□□□□□ -0.73
UBXN1-218ENST00000616865 GTSF1Q8WW33 167 aa10.47□□□□□ -0.73
UBXN1-218ENST00000616865 NDUFAF3Q9BU61 184 aa10.47□□□□□ -0.73
UBXN1-218ENST00000616865 SSBP4Q9BWG4 385 aaPredicted RBP10.47□□□□□ -0.73
UBXN1-218ENST00000616865 SMIM27A0A1W2PRY6 76 aa10.46□□□□□ -0.73
UBXN1-218ENST00000616865 A8MWV9 139 aa10.46□□□□□ -0.73
UBXN1-218ENST00000616865 IGHV3-53P01767 116 aa10.46□□□□□ -0.73
UBXN1-218ENST00000616865 TWIST1Q15672 202 aa10.46□□□□□ -0.73
UBXN1-218ENST00000616865 PIK3CD-AS1Q5SR53 167 aa10.46□□□□□ -0.73
UBXN1-218ENST00000616865 WDR73Q6P4I2 378 aa10.46□□□□□ -0.73
UBXN1-218ENST00000616865 SMIM15Q7Z3B0 74 aa10.46□□□□□ -0.73
UBXN1-218ENST00000616865 LINC00612Q8N6U2 182 aa10.46□□□□□ -0.73
UBXN1-218ENST00000616865 TRAV4A0A0B4J268 109 aa10.45□□□□□ -0.74
UBXN1-218ENST00000616865 A0A1B0GUT8 65 aa10.45□□□□□ -0.74
UBXN1-218ENST00000616865 M0R2N4 97 aa10.45□□□□□ -0.74
UBXN1-218ENST00000616865 SMIM17P0DL12 118 aa10.45□□□□□ -0.74
UBXN1-218ENST00000616865 S100PP25815 95 aa10.45□□□□□ -0.74
UBXN1-218ENST00000616865 RIGQ13278 110 aa10.45□□□□□ -0.74
UBXN1-218ENST00000616865 KCNIP4Q6PIL6 250 aa10.45□□□□□ -0.74
UBXN1-218ENST00000616865 A0A087WWC5 75 aa10.44□□□□□ -0.74
UBXN1-218ENST00000616865 TRGV4A0A0C4DH28 118 aa10.44□□□□□ -0.74
UBXN1-218ENST00000616865 F5H768 121 aa10.44□□□□□ -0.74
UBXN1-218ENST00000616865 TRGC1P0CF51 173 aa10.44□□□□□ -0.74
UBXN1-218ENST00000616865 NTF3P20783 257 aa10.44□□□□□ -0.74
UBXN1-218ENST00000616865 FOXA3P55318 350 aaPredicted RBP10.44□□□□□ -0.74
UBXN1-218ENST00000616865 NUP35Q8NFH5 326 aa10.44□□□□□ -0.74
UBXN1-218ENST00000616865 AP1S3Q96PC3 154 aa10.44□□□□□ -0.74
UBXN1-218ENST00000616865 RS1O15537 224 aa10.43□□□□□ -0.74
UBXN1-218ENST00000616865 NXPH4O95158 308 aa10.43□□□□□ -0.74
UBXN1-218ENST00000616865 FAM74A4Q5TZK3 123 aa10.43□□□□□ -0.74
UBXN1-218ENST00000616865 CFAP126Q5VTH2 177 aa10.43□□□□□ -0.74
UBXN1-218ENST00000616865 C18orf15Q96N68 181 aa10.43□□□□□ -0.74
UBXN1-218ENST00000616865 MUC4Q99102 2169 aa10.42□□□□□ -0.74
UBXN1-218ENST00000616865 RHODO00212 210 aa10.42□□□□□ -0.74
UBXN1-218ENST00000616865 CIDEAO60543 219 aa10.42□□□□□ -0.74
UBXN1-218ENST00000616865 FAM3BP58499 235 aaPredicted RBP10.42□□□□□ -0.74
UBXN1-218ENST00000616865 IMMP2LQ96T52 175 aa10.42□□□□□ -0.74
UBXN1-218ENST00000616865 JPT2Q9H910 190 aa10.42□□□□□ -0.74
UBXN1-218ENST00000616865 TMEM242Q9NWH2 141 aa10.42□□□□□ -0.74
UBXN1-218ENST00000616865 MSRB1Q9NZV6 116 aa10.42□□□□□ -0.74
UBXN1-218ENST00000616865 A0A087WWL8 130 aa10.41□□□□□ -0.74
UBXN1-218ENST00000616865 IGHV3-73A0A0B4J1V6 119 aa10.41□□□□□ -0.74
UBXN1-218ENST00000616865 S100A8P05109 93 aa10.41□□□□□ -0.74
UBXN1-218ENST00000616865 MRPL54Q6P161 138 aaKnown RBP10.41□□□□□ -0.74
UBXN1-218ENST00000616865 C14orf178Q8N769 122 aaPredicted RBP10.41□□□□□ -0.74
UBXN1-218ENST00000616865 ZNF479Q96JC4 524 aa10.41□□□□□ -0.74
UBXN1-218ENST00000616865 CNFNQ9BYD5 112 aa10.41□□□□□ -0.74
UBXN1-218ENST00000616865 A0A1B0GW15 77 aa10.4□□□□□ -0.74
UBXN1-218ENST00000616865 F5H697 171 aa10.4□□□□□ -0.74
UBXN1-218ENST00000616865 MGPP08493 103 aa10.4□□□□□ -0.74
UBXN1-218ENST00000616865 SLAQ13239 276 aa10.4□□□□□ -0.74
UBXN1-218ENST00000616865 ZNF56Q15929 161 aa10.4□□□□□ -0.74
UBXN1-218ENST00000616865 UBE2DNLQ8IWF7 75 aa10.4□□□□□ -0.74
UBXN1-218ENST00000616865 BTF3L4Q96K17 158 aa10.4□□□□□ -0.74
UBXN1-218ENST00000616865 HSPG2P98160 4391 aa10.4□□□□□ -0.74
UBXN1-218ENST00000616865 IGLV2-18A0A075B6J9 118 aa10.39□□□□□ -0.75
UBXN1-218ENST00000616865 ZFP2Q6ZN57 461 aa10.39□□□□□ -0.75
UBXN1-218ENST00000616865 Q6ZR54 194 aa10.39□□□□□ -0.75
UBXN1-218ENST00000616865 FAM210BQ96KR6 192 aa10.39□□□□□ -0.75
UBXN1-218ENST00000616865 SAMD10Q9BYL1 202 aa10.39□□□□□ -0.75
UBXN1-218ENST00000616865 DPH3P1Q9H4G8 78 aa10.39□□□□□ -0.75
UBXN1-218ENST00000616865 URGCP-MRPS24S4R325 110 aa10.39□□□□□ -0.75
UBXN1-218ENST00000616865 TRAV9-1A0A075B6T8 112 aa10.38□□□□□ -0.75
UBXN1-218ENST00000616865 CAMPP49913 170 aa10.38□□□□□ -0.75
UBXN1-218ENST00000616865 HBBP68871 147 aa10.38□□□□□ -0.75
UBXN1-218ENST00000616865 ATP5L2Q7Z4Y8 100 aa10.38□□□□□ -0.75
UBXN1-218ENST00000616865 HHLA3Q9XRX5 114 aa10.38□□□□□ -0.75
UBXN1-218ENST00000616865 PAX4O43316 350 aa10.37□□□□□ -0.75
UBXN1-218ENST00000616865 ATP6V1G1O75348 118 aa10.37□□□□□ -0.75
UBXN1-218ENST00000616865 CRYGDP07320 174 aa10.37□□□□□ -0.75
UBXN1-218ENST00000616865 HOXA5P20719 270 aa10.37□□□□□ -0.75
UBXN1-218ENST00000616865 EVI2AP22794 236 aa10.37□□□□□ -0.75
UBXN1-218ENST00000616865 S100A1P23297 94 aa10.37□□□□□ -0.75
UBXN1-218ENST00000616865 FHL2Q14192 279 aa10.37□□□□□ -0.75
UBXN1-218ENST00000616865 ATRAIDQ6UW56 229 aa10.37□□□□□ -0.75
UBXN1-218ENST00000616865 PRO0255Q9UI72 69 aa10.37□□□□□ -0.75
UBXN1-218ENST00000616865 NACAE9PAV3 2078 aa10.37□□□□□ -0.75
UBXN1-218ENST00000616865 TRAV26-1A0A087WT03 109 aa10.36□□□□□ -0.75
UBXN1-218ENST00000616865 A0A0J9YY99 117 aa10.36□□□□□ -0.75
UBXN1-218ENST00000616865 RAB4BP61018 213 aa10.36□□□□□ -0.75
UBXN1-218ENST00000616865 PRADC1Q9BSG0 188 aa10.36□□□□□ -0.75
UBXN1-218ENST00000616865 KRTAP4-5Q9BYR2 181 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms