RNA–Protein interactions for RNA: ENST00000616789.4

UPK1A-203, Transcript of uroplakin 1A, humanhuman

TSL 5 BASIC

Gene UPK1A, Length 1,366 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1A-203ENST00000616789 SH2D6Q7Z4S9 175 aa9.28□□□□□ -0.92
UPK1A-203ENST00000616789 OR10AG1Q8NH19 301 aa9.28□□□□□ -0.92
UPK1A-203ENST00000616789 SMIM12Q96EX1 92 aa9.28□□□□□ -0.92
UPK1A-203ENST00000616789 PRADC1Q9BSG0 188 aa9.28□□□□□ -0.92
UPK1A-203ENST00000616789 PHLDA3Q9Y5J5 127 aa9.28□□□□□ -0.92
UPK1A-203ENST00000616789 OR5AL1P0C617 328 aa9.27□□□□□ -0.93
UPK1A-203ENST00000616789 LINC00315P59091 139 aa9.27□□□□□ -0.93
UPK1A-203ENST00000616789 SYT8Q8NBV8 401 aa9.27□□□□□ -0.93
UPK1A-203ENST00000616789 MED9Q9NWA0 146 aa9.27□□□□□ -0.93
UPK1A-203ENST00000616789 A0A087WWL8 130 aa9.26□□□□□ -0.93
UPK1A-203ENST00000616789 M0R381 172 aa9.26□□□□□ -0.93
UPK1A-203ENST00000616789 IGLC6P0CF74 106 aa9.26□□□□□ -0.93
UPK1A-203ENST00000616789 TAGLN2P37802 199 aaKnown RBP9.26□□□□□ -0.93
UPK1A-203ENST00000616789 BLOC1S1P78537 153 aa9.26□□□□□ -0.93
UPK1A-203ENST00000616789 ZFP82Q8N141 532 aa9.26□□□□□ -0.93
UPK1A-203ENST00000616789 KIF25-AS1Q9Y6Z4 181 aa9.26□□□□□ -0.93
UPK1A-203ENST00000616789 K7EN84 100 aa9.25□□□□□ -0.93
UPK1A-203ENST00000616789 GZMBP10144 247 aa9.25□□□□□ -0.93
UPK1A-203ENST00000616789 GNG4P50150 75 aa9.25□□□□□ -0.93
UPK1A-203ENST00000616789 GTSF1LQ9H1H1 148 aa9.25□□□□□ -0.93
UPK1A-203ENST00000616789 MUC21A0A0G2JKD1 596 aa9.24□□□□□ -0.93
UPK1A-203ENST00000616789 MUC21A0A140T8X8 626 aa9.24□□□□□ -0.93
UPK1A-203ENST00000616789 RBFOX3A6NFN3 312 aa9.24□□□□□ -0.93
UPK1A-203ENST00000616789 RHODO00212 210 aa9.24□□□□□ -0.93
UPK1A-203ENST00000616789 ATP6V0E2Q8NHE4 81 aa9.24□□□□□ -0.93
UPK1A-203ENST00000616789 OCC1Q8TAD7 63 aa9.24□□□□□ -0.93
UPK1A-203ENST00000616789 LY96Q9Y6Y9 160 aa9.24□□□□□ -0.93
UPK1A-203ENST00000616789 GAGE12JA6NER3 117 aa9.24□□□□□ -0.93
UPK1A-203ENST00000616789 K7EP13 123 aa9.24□□□□□ -0.93
UPK1A-203ENST00000616789 GAGE1Q13065 139 aa9.24□□□□□ -0.93
UPK1A-203ENST00000616789 GAGE4Q13068 117 aa9.24□□□□□ -0.93
UPK1A-203ENST00000616789 GAGE5Q13069 117 aa9.24□□□□□ -0.93
UPK1A-203ENST00000616789 GAGE13Q4V321 117 aa9.24□□□□□ -0.93
UPK1A-203ENST00000616789 LINC01556Q5JQF7 62 aa9.24□□□□□ -0.93
UPK1A-203ENST00000616789 LELP1Q5T871 98 aa9.24□□□□□ -0.93
UPK1A-203ENST00000616789 FAM74A4Q5TZK3 123 aa9.24□□□□□ -0.93
UPK1A-203ENST00000616789 IGHV3-38A0A0C4DH36 116 aa9.23□□□□□ -0.93
UPK1A-203ENST00000616789 TMEM250H0YL14 139 aa9.23□□□□□ -0.93
UPK1A-203ENST00000616789 NDUFS6O75380 124 aaKnown RBP9.23□□□□□ -0.93
UPK1A-203ENST00000616789 NUDT10Q8NFP7 164 aa9.23□□□□□ -0.93
UPK1A-203ENST00000616789 DAZAP1Q96EP5 407 aaKnown RBP9.23□□□□□ -0.93
UPK1A-203ENST00000616789 NUDT11Q96G61 164 aa9.23□□□□□ -0.93
UPK1A-203ENST00000616789 Q8N3U1 123 aa9.22□□□□□ -0.93
UPK1A-203ENST00000616789 OR2D3Q8NGH3 330 aa9.22□□□□□ -0.93
UPK1A-203ENST00000616789 OR10G8Q8NGN5 311 aa9.22□□□□□ -0.93
UPK1A-203ENST00000616789 MSRB1Q9NZV6 116 aa9.22□□□□□ -0.93
UPK1A-203ENST00000616789 TRBV10-1A0A0K0K1A3 114 aa9.21□□□□□ -0.94
UPK1A-203ENST00000616789 KRTAP10-2P60368 255 aa9.21□□□□□ -0.94
UPK1A-203ENST00000616789 RAB4BP61018 213 aa9.21□□□□□ -0.94
UPK1A-203ENST00000616789 SSTP61278 116 aa9.21□□□□□ -0.94
UPK1A-203ENST00000616789 FAM210AQ96ND0 272 aa9.21□□□□□ -0.94
UPK1A-203ENST00000616789 TRAV9-2A0A087WT02 112 aa9.2□□□□□ -0.94
UPK1A-203ENST00000616789 IBA57-AS1B1ANH7 110 aa9.2□□□□□ -0.94
UPK1A-203ENST00000616789 P01737 135 aa9.2□□□□□ -0.94
UPK1A-203ENST00000616789 EVI2AP22794 236 aa9.2□□□□□ -0.94
UPK1A-203ENST00000616789 RPS20P60866 119 aaKnown RBP9.2□□□□□ -0.94
UPK1A-203ENST00000616789 UBE2D3P61077 147 aa9.2□□□□□ -0.94
UPK1A-203ENST00000616789 UBE2D2P62837 147 aa9.2□□□□□ -0.94
UPK1A-203ENST00000616789 SPANXN1Q5VSR9 72 aa9.2□□□□□ -0.94
UPK1A-203ENST00000616789 CNFNQ9BYD5 112 aa9.2□□□□□ -0.94
UPK1A-203ENST00000616789 RNASE7Q9H1E1 156 aaKnown RBP9.2□□□□□ -0.94
UPK1A-203ENST00000616789 BIN3Q9NQY0 253 aa9.2□□□□□ -0.94
UPK1A-203ENST00000616789 PCLOQ9Y6V0 5065 aa9.19□□□□□ -0.94
UPK1A-203ENST00000616789 OR10J3Q5JRS4 329 aa9.19□□□□□ -0.94
UPK1A-203ENST00000616789 TOR2AQ5JU69 321 aa9.19□□□□□ -0.94
UPK1A-203ENST00000616789 TEX261Q6UWH6 196 aa9.19□□□□□ -0.94
UPK1A-203ENST00000616789 FER1L6-AS1Q8NA97 138 aa9.19□□□□□ -0.94
UPK1A-203ENST00000616789 NEXN-AS1Q8NBZ9 246 aa9.19□□□□□ -0.94
UPK1A-203ENST00000616789 TPPP3Q9BW30 176 aa9.19□□□□□ -0.94
UPK1A-203ENST00000616789 KRTAP17-1Q9BYP8 105 aa9.19□□□□□ -0.94
UPK1A-203ENST00000616789 TRBV7-3A0A075B6L6 115 aa9.18□□□□□ -0.94
UPK1A-203ENST00000616789 TRAV8-6A0A0B4J262 113 aa9.18□□□□□ -0.94
UPK1A-203ENST00000616789 SRP19P09132 144 aaKnown RBP9.18□□□□□ -0.94
UPK1A-203ENST00000616789 CTRLP40313 264 aa9.18□□□□□ -0.94
UPK1A-203ENST00000616789 LYZL1Q6UWQ5 148 aa9.18□□□□□ -0.94
UPK1A-203ENST00000616789 GTSF1Q8WW33 167 aa9.18□□□□□ -0.94
UPK1A-203ENST00000616789 EIF5A2Q9GZV4 153 aaKnown RBP9.18□□□□□ -0.94
UPK1A-203ENST00000616789 DNAH8Q96JB1 4490 aa9.17□□□□□ -0.94
UPK1A-203ENST00000616789 C9JQL5 133 aa9.17□□□□□ -0.94
UPK1A-203ENST00000616789 F2Z2F3 143 aa9.17□□□□□ -0.94
UPK1A-203ENST00000616789 CEBPGP53567 150 aa9.17□□□□□ -0.94
UPK1A-203ENST00000616789 ZNF56Q15929 161 aa9.17□□□□□ -0.94
UPK1A-203ENST00000616789 WDR73Q6P4I2 378 aa9.17□□□□□ -0.94
UPK1A-203ENST00000616789 SPATA12Q7Z6I5 190 aa9.17□□□□□ -0.94
UPK1A-203ENST00000616789 NFE4Q86UQ8 179 aa9.17□□□□□ -0.94
UPK1A-203ENST00000616789 C10orf126Q8N4M7 172 aa9.17□□□□□ -0.94
UPK1A-203ENST00000616789 XKRY2A2RUG3 117 aa9.16□□□□□ -0.94
UPK1A-203ENST00000616789 M0QY20 66 aa9.16□□□□□ -0.94
UPK1A-203ENST00000616789 NTF3P20783 257 aa9.16□□□□□ -0.94
UPK1A-203ENST00000616789 FAM231DQ6ZW35 169 aa9.16□□□□□ -0.94
UPK1A-203ENST00000616789 RPP21Q9H633 154 aaKnown RBP9.16□□□□□ -0.94
UPK1A-203ENST00000616789 A0A087WTM6 91 aa9.15□□□□□ -0.94
UPK1A-203ENST00000616789 A0A087WWC5 75 aa9.15□□□□□ -0.94
UPK1A-203ENST00000616789 LRCOL1A6NCL2 159 aa9.15□□□□□ -0.94
UPK1A-203ENST00000616789 IGHV3-30P01768 117 aa9.15□□□□□ -0.94
UPK1A-203ENST00000616789 IGHV3-33P01772 117 aa9.15□□□□□ -0.94
UPK1A-203ENST00000616789 IGHV3-30-3P0DP02 117 aa9.15□□□□□ -0.94
UPK1A-203ENST00000616789 IGHV3-30-5P0DP03 117 aa9.15□□□□□ -0.94
UPK1A-203ENST00000616789 FOXA3P55318 350 aaPredicted RBP9.15□□□□□ -0.94
UPK1A-203ENST00000616789 CACNG7P62955 275 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms