RNA–Protein interactions for RNA: ENST00000614496.4

MSH6-213, Transcript of mutS homolog 6, humanhuman

TSL 1 (best) BASIC

Gene MSH6, Length 4,150 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-213ENST00000614496 TOMM6Q96B49 74 aa9.53□□□□□ -0.88
MSH6-213ENST00000614496 PLEKHB2Q96CS7 222 aa9.53□□□□□ -0.88
MSH6-213ENST00000614496 LINC01587Q99440 93 aa9.53□□□□□ -0.88
MSH6-213ENST00000614496 SONP18583 2426 aaKnown RBP9.53□□□□□ -0.88
MSH6-213ENST00000614496 LMO4P61968 165 aa9.53□□□□□ -0.88
MSH6-213ENST00000614496 PHLDA1Q8WV24 401 aaPredicted RBP9.53□□□□□ -0.88
MSH6-213ENST00000614496 J3QQQ9 107 aa9.53□□□□□ -0.88
MSH6-213ENST00000614496 ZFP2Q6ZN57 461 aa9.53□□□□□ -0.88
MSH6-213ENST00000614496 C11orf44Q8N8P7 122 aa9.53□□□□□ -0.88
MSH6-213ENST00000614496 TM2D2Q9BX73 214 aa9.53□□□□□ -0.88
MSH6-213ENST00000614496 CCDC168Q8NDH2 2452 aa9.52□□□□□ -0.89
MSH6-213ENST00000614496 E9PLD3 99 aa9.52□□□□□ -0.89
MSH6-213ENST00000614496 SPAG8Q99932 426 aaPredicted RBP9.52□□□□□ -0.89
MSH6-213ENST00000614496 CITED1Q99966 193 aa9.52□□□□□ -0.89
MSH6-213ENST00000614496 ZFAND2AQ8N6M9 145 aa9.51□□□□□ -0.89
MSH6-213ENST00000614496 DMDP11532 3685 aa9.51□□□□□ -0.89
MSH6-213ENST00000614496 TRAV12-1A0A0B4J245 112 aa9.51□□□□□ -0.89
MSH6-213ENST00000614496 C11orf71Q6IPW1 123 aa9.51□□□□□ -0.89
MSH6-213ENST00000614496 MSMBP08118 114 aa9.51□□□□□ -0.89
MSH6-213ENST00000614496 MEIG1Q5JSS6 88 aa9.51□□□□□ -0.89
MSH6-213ENST00000614496 CNFNQ9BYD5 112 aa9.51□□□□□ -0.89
MSH6-213ENST00000614496 DEFB131AP59861 70 aa9.5□□□□□ -0.89
MSH6-213ENST00000614496 IGHV3-16A0A0C4DH30 117 aa9.5□□□□□ -0.89
MSH6-213ENST00000614496 SNCGO76070 127 aa9.5□□□□□ -0.89
MSH6-213ENST00000614496 PRO1854Q9UHT4 67 aa9.5□□□□□ -0.89
MSH6-213ENST00000614496 MUC3AQ02505 3323 aa9.5□□□□□ -0.89
MSH6-213ENST00000614496 AKAP13Q12802 2813 aa9.5□□□□□ -0.89
MSH6-213ENST00000614496 IGHV1OR15-1A0A075B7D0 117 aa9.5□□□□□ -0.89
MSH6-213ENST00000614496 IGHV3-38A0A0C4DH36 116 aa9.5□□□□□ -0.89
MSH6-213ENST00000614496 A0A1W2PPR1 153 aa9.5□□□□□ -0.89
MSH6-213ENST00000614496 ZNF625Q96I27 306 aaPredicted RBP9.5□□□□□ -0.89
MSH6-213ENST00000614496 TMEM141Q96I45 108 aa9.5□□□□□ -0.89
MSH6-213ENST00000614496 MDFICQ9P1T7 246 aa9.5□□□□□ -0.89
MSH6-213ENST00000614496 A0A0J9YXV3 536 aa9.49□□□□□ -0.89
MSH6-213ENST00000614496 TTC32Q5I0X7 151 aa9.49□□□□□ -0.89
MSH6-213ENST00000614496 TRPT1Q86TN4 253 aaKnown RBP9.49□□□□□ -0.89
MSH6-213ENST00000614496 DMXL2Q8TDJ6 3036 aa9.49□□□□□ -0.89
MSH6-213ENST00000614496 NEXN-AS1Q8NBZ9 246 aa9.49□□□□□ -0.89
MSH6-213ENST00000614496 TRGV11A0A075B6L2 103 aa9.49□□□□□ -0.89
MSH6-213ENST00000614496 TIMM21Q9BVV7 248 aa9.49□□□□□ -0.89
MSH6-213ENST00000614496 A0A1W2PRX2 142 aa9.49□□□□□ -0.89
MSH6-213ENST00000614496 IGHV4-59P01825 116 aa9.49□□□□□ -0.89
MSH6-213ENST00000614496 SPANXB1Q9NS25 103 aaPredicted RBP9.49□□□□□ -0.89
MSH6-213ENST00000614496 COL27A1Q8IZC6 1860 aaPredicted RBP9.48□□□□□ -0.89
MSH6-213ENST00000614496 B4DSR2 109 aa9.48□□□□□ -0.89
MSH6-213ENST00000614496 INSL3P51460 131 aa9.48□□□□□ -0.89
MSH6-213ENST00000614496 IGHV4-30-2A0A087WSY4 118 aa9.48□□□□□ -0.89
MSH6-213ENST00000614496 NRGNQ92686 78 aa9.48□□□□□ -0.89
MSH6-213ENST00000614496 A4D1N5 150 aa9.47□□□□□ -0.89
MSH6-213ENST00000614496 C19orf84I3L1E1 186 aa9.47□□□□□ -0.89
MSH6-213ENST00000614496 CIRBPQ14011 172 aaKnown RBP9.47□□□□□ -0.89
MSH6-213ENST00000614496 TEX29Q8N6K0 151 aa9.47□□□□□ -0.89
MSH6-213ENST00000614496 PPDPFLQ8WWR9 84 aa9.47□□□□□ -0.89
MSH6-213ENST00000614496 ASPMQ8IZT6 3477 aa9.47□□□□□ -0.89
MSH6-213ENST00000614496 POLQO75417 2590 aa9.47□□□□□ -0.89
MSH6-213ENST00000614496 Q8N1Y9 231 aa9.47□□□□□ -0.89
MSH6-213ENST00000614496 ANAPC13Q9BS18 74 aa9.47□□□□□ -0.89
MSH6-213ENST00000614496 NAV2Q8IVL1 2488 aa9.47□□□□□ -0.89
MSH6-213ENST00000614496 KALRNO60229 2985 aa9.47□□□□□ -0.89
MSH6-213ENST00000614496 I3L3M4 83 aa9.47□□□□□ -0.89
MSH6-213ENST00000614496 IGHV3-53P01767 116 aa9.47□□□□□ -0.89
MSH6-213ENST00000614496 Q6ZS46 218 aa9.47□□□□□ -0.89
MSH6-213ENST00000614496 CFAP47Q6ZTR5 3102 aa9.47□□□□□ -0.89
MSH6-213ENST00000614496 MAP1AP78559 2803 aaPredicted RBP9.46□□□□□ -0.89
MSH6-213ENST00000614496 ATP6V0BQ99437 205 aa9.46□□□□□ -0.89
MSH6-213ENST00000614496 TACC2O95359 2948 aa9.46□□□□□ -0.89
MSH6-213ENST00000614496 MYO18BQ8IUG5 2567 aa9.46□□□□□ -0.89
MSH6-213ENST00000614496 COX8CQ7Z4L0 72 aa9.46□□□□□ -0.89
MSH6-213ENST00000614496 EDN2P20800 178 aa9.46□□□□□ -0.9
MSH6-213ENST00000614496 UBE2E2Q96LR5 201 aa9.46□□□□□ -0.9
MSH6-213ENST00000614496 ZMAT4Q9H898 229 aa9.46□□□□□ -0.9
MSH6-213ENST00000614496 PIEZO1Q92508 2521 aa9.46□□□□□ -0.9
MSH6-213ENST00000614496 TSPAN13O95857 204 aa9.45□□□□□ -0.9
MSH6-213ENST00000614496 DEFB136Q30KP8 78 aa9.45□□□□□ -0.9
MSH6-213ENST00000614496 ZNF292O60281 2723 aa9.45□□□□□ -0.9
MSH6-213ENST00000614496 IGLV2-18A0A075B6J9 118 aa9.45□□□□□ -0.9
MSH6-213ENST00000614496 TRBV20-1A0A075B6N2 111 aa9.45□□□□□ -0.9
MSH6-213ENST00000614496 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.45□□□□□ -0.9
MSH6-213ENST00000614496 M0R2P5 195 aa9.45□□□□□ -0.9
MSH6-213ENST00000614496 RNASE3P12724 160 aaKnown RBP9.45□□□□□ -0.9
MSH6-213ENST00000614496 TCTEX1D4Q5JR98 221 aa9.45□□□□□ -0.9
MSH6-213ENST00000614496 TOMM7Q9P0U1 55 aa9.45□□□□□ -0.9
MSH6-213ENST00000614496 SLC25A20O43772 301 aa9.45□□□□□ -0.9
MSH6-213ENST00000614496 DEFB112Q30KQ8 113 aa9.45□□□□□ -0.9
MSH6-213ENST00000614496 C1QTNF4Q9BXJ3 329 aa9.45□□□□□ -0.9
MSH6-213ENST00000614496 FOXI1Q12951 378 aa9.45□□□□□ -0.9
MSH6-213ENST00000614496 C10orf99Q6UWK7 81 aa9.45□□□□□ -0.9
MSH6-213ENST00000614496 IGHG2P01859 326 aa9.44□□□□□ -0.9
MSH6-213ENST00000614496 C2orf82Q6UX34 121 aa9.44□□□□□ -0.9
MSH6-213ENST00000614496 C19orf54Q5BKX5 351 aa9.44□□□□□ -0.9
MSH6-213ENST00000614496 CEMP1Q6PRD7 247 aaPredicted RBP9.44□□□□□ -0.9
MSH6-213ENST00000614496 MUSTN1Q8IVN3 82 aa9.44□□□□□ -0.9
MSH6-213ENST00000614496 TMEM262E9PQX1 116 aa9.44□□□□□ -0.9
MSH6-213ENST00000614496 TRBV7-3A0A075B6L6 115 aa9.43□□□□□ -0.9
MSH6-213ENST00000614496 ZFAND6Q6FIF0 208 aa9.43□□□□□ -0.9
MSH6-213ENST00000614496 NTN5Q8WTR8 489 aaPredicted RBP9.43□□□□□ -0.9
MSH6-213ENST00000614496 TRAV8-4A0A0B4J246 113 aa9.43□□□□□ -0.9
MSH6-213ENST00000614496 CFC1BP0CG36 223 aa9.43□□□□□ -0.9
MSH6-213ENST00000614496 CFC1P0CG37 223 aa9.43□□□□□ -0.9
MSH6-213ENST00000614496 GAGE2BQ13066 116 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms