RNA–Protein interactions for RNA: ENST00000613899.4

FAM228B-208, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FAM228B, Length 1,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-208ENST00000613899 SAMD10Q9BYL1 202 aa15.26■□□□□ 0.03
FAM228B-208ENST00000613899 Q9HAA7 133 aa15.26■□□□□ 0.03
FAM228B-208ENST00000613899 FAM74A4Q5TZK3 123 aa15.25■□□□□ 0.03
FAM228B-208ENST00000613899 TMSB15BA0A087X1C1 80 aa15.24■□□□□ 0.03
FAM228B-208ENST00000613899 ZFP82Q8N141 532 aa15.24■□□□□ 0.03
FAM228B-208ENST00000613899 SFRP2Q96HF1 295 aa15.24■□□□□ 0.03
FAM228B-208ENST00000613899 A0A087WWC5 75 aa15.23■□□□□ 0.03
FAM228B-208ENST00000613899 A0A1B0GV50 99 aa15.23■□□□□ 0.03
FAM228B-208ENST00000613899 M0R381 172 aa15.23■□□□□ 0.03
FAM228B-208ENST00000613899 C14orf178Q8N769 122 aaPredicted RBP15.23■□□□□ 0.03
FAM228B-208ENST00000613899 SCO2A0A1W2PP80 73 aa15.22■□□□□ 0.03
FAM228B-208ENST00000613899 H2AFB1P0C5Y9 115 aa15.22■□□□□ 0.03
FAM228B-208ENST00000613899 LRCOL1A6NCL2 159 aa15.21■□□□□ 0.03
FAM228B-208ENST00000613899 NTN5Q8WTR8 489 aaPredicted RBP15.21■□□□□ 0.03
FAM228B-208ENST00000613899 A0A087WWL8 130 aa15.2■□□□□ 0.02
FAM228B-208ENST00000613899 GCSHP23434 173 aa15.2■□□□□ 0.02
FAM228B-208ENST00000613899 KRTAP10-1P60331 282 aa15.2■□□□□ 0.02
FAM228B-208ENST00000613899 TM2D2Q9BX73 214 aa15.2■□□□□ 0.02
FAM228B-208ENST00000613899 Q9UF83 564 aa15.2■□□□□ 0.02
FAM228B-208ENST00000613899 CXCL1P09341 107 aa15.19■□□□□ 0.02
FAM228B-208ENST00000613899 TOR2AQ5JU69 321 aa15.19■□□□□ 0.02
FAM228B-208ENST00000613899 IGLV5-52A0A0A0MRZ9 124 aa15.18■□□□□ 0.02
FAM228B-208ENST00000613899 TRBV10-1A0A0K0K1A3 114 aa15.18■□□□□ 0.02
FAM228B-208ENST00000613899 TMUB2Q71RG4 321 aa15.18■□□□□ 0.02
FAM228B-208ENST00000613899 BAGE2Q86Y30 109 aa15.18■□□□□ 0.02
FAM228B-208ENST00000613899 MLST8Q9BVC4 326 aa15.18■□□□□ 0.02
FAM228B-208ENST00000613899 TRAV8-3A0A0A6YYJ7 113 aa15.17■□□□□ 0.02
FAM228B-208ENST00000613899 XGP55808 180 aa15.17■□□□□ 0.02
FAM228B-208ENST00000613899 Q8N3U1 123 aa15.17■□□□□ 0.02
FAM228B-208ENST00000613899 Q8N814 137 aa15.17■□□□□ 0.02
FAM228B-208ENST00000613899 EPM2AB3EWF7 344 aa15.16■□□□□ 0.02
FAM228B-208ENST00000613899 MANBALQ9NQG1 85 aa15.16■□□□□ 0.02
FAM228B-208ENST00000613899 URGCP-MRPS24S4R325 110 aa15.16■□□□□ 0.02
FAM228B-208ENST00000613899 RPL36AP83881 106 aaKnown RBP15.15■□□□□ 0.02
FAM228B-208ENST00000613899 RPL19P84098 196 aaKnown RBP15.15■□□□□ 0.02
FAM228B-208ENST00000613899 DAZ4Q86SG3 579 aaKnown RBP15.15■□□□□ 0.02
FAM228B-208ENST00000613899 RPL36ALQ969Q0 106 aaKnown RBP15.15■□□□□ 0.02
FAM228B-208ENST00000613899 DAZ3Q9NR90 486 aaKnown RBP15.15■□□□□ 0.02
FAM228B-208ENST00000613899 EIF5AL1Q6IS14 154 aaKnown RBP15.14■□□□□ 0.01
FAM228B-208ENST00000613899 PRR27Q6MZM9 219 aa15.14■□□□□ 0.01
FAM228B-208ENST00000613899 SNAI2O43623 268 aa15.13■□□□□ 0.01
FAM228B-208ENST00000613899 RAB5CP51148 216 aa15.13■□□□□ 0.01
FAM228B-208ENST00000613899 OR10AG1Q8NH19 301 aa15.13■□□□□ 0.01
FAM228B-208ENST00000613899 GNG13Q9P2W3 67 aa15.13■□□□□ 0.01
FAM228B-208ENST00000613899 TRBV7-3A0A075B6L6 115 aa15.12■□□□□ 0.01
FAM228B-208ENST00000613899 TEX46H3BTG2 121 aa15.12■□□□□ 0.01
FAM228B-208ENST00000613899 RPL35P42766 123 aaKnown RBP15.12■□□□□ 0.01
FAM228B-208ENST00000613899 RAB4BP61018 213 aa15.12■□□□□ 0.01
FAM228B-208ENST00000613899 NIT1Q86X76 327 aa15.12■□□□□ 0.01
FAM228B-208ENST00000613899 COX11Q9Y6N1 276 aa15.12■□□□□ 0.01
FAM228B-208ENST00000613899 TRAV1-1A0A0B4J248 108 aa15.11■□□□□ 0.01
FAM228B-208ENST00000613899 OR5AL1P0C617 328 aa15.11■□□□□ 0.01
FAM228B-208ENST00000613899 UBE2D3P61077 147 aa15.11■□□□□ 0.01
FAM228B-208ENST00000613899 UBE2D2P62837 147 aa15.11■□□□□ 0.01
FAM228B-208ENST00000613899 ZNF56Q15929 161 aa15.11■□□□□ 0.01
FAM228B-208ENST00000613899 OR10G8Q8NGN5 311 aa15.11■□□□□ 0.01
FAM228B-208ENST00000613899 C11orf52Q96A22 123 aa15.11■□□□□ 0.01
FAM228B-208ENST00000613899 RMI2Q96E14 147 aa15.11■□□□□ 0.01
FAM228B-208ENST00000613899 TMEM70Q9BUB7 260 aa15.11■□□□□ 0.01
FAM228B-208ENST00000613899 CHCHD7Q9BUK0 85 aa15.11■□□□□ 0.01
FAM228B-208ENST00000613899 SSBP4Q9BWG4 385 aaPredicted RBP15.11■□□□□ 0.01
FAM228B-208ENST00000613899 SPANXN1Q5VSR9 72 aa15.1■□□□□ 0.01
FAM228B-208ENST00000613899 KCNIP4Q6PIL6 250 aa15.1■□□□□ 0.01
FAM228B-208ENST00000613899 FRZBQ92765 325 aa15.1■□□□□ 0.01
FAM228B-208ENST00000613899 A0A087WX48 190 aa15.09■□□□□ 0.01
FAM228B-208ENST00000613899 CCL20P78556 96 aa15.08■□□□□ 0
FAM228B-208ENST00000613899 ELOBQ15370 118 aa15.08■□□□□ 0
FAM228B-208ENST00000613899 Q5VSD8 79 aa15.08■□□□□ 0
FAM228B-208ENST00000613899 DERL1Q9BUN8 251 aa15.08■□□□□ 0
FAM228B-208ENST00000613899 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.07■□□□□ 0
FAM228B-208ENST00000613899 SULT1A2P50226 295 aa15.06■□□□□ 0
FAM228B-208ENST00000613899 WFDC2Q14508 124 aa15.06■□□□□ 0
FAM228B-208ENST00000613899 CENPWQ5EE01 88 aa15.06■□□□□ 0
FAM228B-208ENST00000613899 TCTE3Q8IZS6 198 aa15.06■□□□□ 0
FAM228B-208ENST00000613899 NEXN-AS1Q8NBZ9 246 aa15.06■□□□□ 0
FAM228B-208ENST00000613899 AP1S3Q96PC3 154 aa15.06■□□□□ 0
FAM228B-208ENST00000613899 KLK12Q9UKR0 248 aa15.06■□□□□ 0
FAM228B-208ENST00000613899 MUC21A0A0G2JKD1 596 aa15.05■□□□□ -0
FAM228B-208ENST00000613899 MUC21A0A140T8X8 626 aa15.05■□□□□ -0
FAM228B-208ENST00000613899 IFNA1P01562 189 aa15.05■□□□□ -0
FAM228B-208ENST00000613899 SMIM17P0DL12 118 aa15.05■□□□□ -0
FAM228B-208ENST00000613899 SMIM12Q96EX1 92 aa15.05■□□□□ -0
FAM228B-208ENST00000613899 TRBV6-8A0A0A6YYG3 113 aa15.04■□□□□ -0
FAM228B-208ENST00000613899 F5H697 171 aa15.04■□□□□ -0
FAM228B-208ENST00000613899 C1QBP02746 253 aa15.04■□□□□ -0
FAM228B-208ENST00000613899 MEF2BQ02080 365 aaPredicted RBP15.04■□□□□ -0
FAM228B-208ENST00000613899 DAZAP1Q96EP5 407 aaKnown RBP15.04■□□□□ -0
FAM228B-208ENST00000613899 IGKV2D-24A0A075B6R9 120 aa15.03■□□□□ -0
FAM228B-208ENST00000613899 LECT2O14960 151 aa15.03■□□□□ -0
FAM228B-208ENST00000613899 PDE6DO43924 150 aa15.03■□□□□ -0
FAM228B-208ENST00000613899 RPS20P60866 119 aaKnown RBP15.03■□□□□ -0
FAM228B-208ENST00000613899 RBFOX3A6NFN3 312 aa15.02■□□□□ -0
FAM228B-208ENST00000613899 GNG4P50150 75 aa15.02■□□□□ -0
FAM228B-208ENST00000613899 SLC51BQ86UW2 128 aa15.02■□□□□ -0
FAM228B-208ENST00000613899 UBE2WQ96B02 151 aa15.02■□□□□ -0
FAM228B-208ENST00000613899 IGLV2-8P01709 118 aa15.01□□□□□ -0.01
FAM228B-208ENST00000613899 SMR3BP02814 79 aaPredicted RBP15.01□□□□□ -0.01
FAM228B-208ENST00000613899 SSTP61278 116 aa15.01□□□□□ -0.01
FAM228B-208ENST00000613899 PKIAP61925 76 aa15.01□□□□□ -0.01
FAM228B-208ENST00000613899 HAMPP81172 84 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms