RNA–Protein interactions for RNA: ENST00000612509.4

SEMA3B-211, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-211ENST00000612509 LINC00694P0DN24 101 aa12.35□□□□□ -0.43
SEMA3B-211ENST00000612509 TIRAPP58753 221 aa12.35□□□□□ -0.43
SEMA3B-211ENST00000612509 WFDC10BQ8IUB3 73 aa12.35□□□□□ -0.43
SEMA3B-211ENST00000612509 OR2D3Q8NGH3 330 aa12.35□□□□□ -0.43
SEMA3B-211ENST00000612509 P01737 135 aa12.34□□□□□ -0.43
SEMA3B-211ENST00000612509 CRYGDP07320 174 aa12.34□□□□□ -0.43
SEMA3B-211ENST00000612509 RPS20P60866 119 aaKnown RBP12.34□□□□□ -0.43
SEMA3B-211ENST00000612509 C14orf178Q8N769 122 aaPredicted RBP12.34□□□□□ -0.43
SEMA3B-211ENST00000612509 MUC21A0A0G2JKD1 596 aa12.33□□□□□ -0.44
SEMA3B-211ENST00000612509 MUC21A0A140T8X8 626 aa12.33□□□□□ -0.44
SEMA3B-211ENST00000612509 GAGE12JA6NER3 117 aa12.33□□□□□ -0.44
SEMA3B-211ENST00000612509 IGLC6P0CF74 106 aa12.33□□□□□ -0.44
SEMA3B-211ENST00000612509 GZMBP10144 247 aa12.33□□□□□ -0.44
SEMA3B-211ENST00000612509 GAGE1Q13065 139 aa12.33□□□□□ -0.44
SEMA3B-211ENST00000612509 GAGE4Q13068 117 aa12.33□□□□□ -0.44
SEMA3B-211ENST00000612509 GAGE5Q13069 117 aa12.33□□□□□ -0.44
SEMA3B-211ENST00000612509 GAGE13Q4V321 117 aa12.33□□□□□ -0.44
SEMA3B-211ENST00000612509 SPANXN1Q5VSR9 72 aa12.33□□□□□ -0.44
SEMA3B-211ENST00000612509 FAM210AQ96ND0 272 aa12.33□□□□□ -0.44
SEMA3B-211ENST00000612509 K7EN84 100 aa12.32□□□□□ -0.44
SEMA3B-211ENST00000612509 FER1L6-AS1Q8NA97 138 aa12.32□□□□□ -0.44
SEMA3B-211ENST00000612509 ATP6V0E2Q8NHE4 81 aa12.32□□□□□ -0.44
SEMA3B-211ENST00000612509 LY96Q9Y6Y9 160 aa12.32□□□□□ -0.44
SEMA3B-211ENST00000612509 DNAH11Q96DT5 4516 aa12.32□□□□□ -0.44
SEMA3B-211ENST00000612509 DYNC1H1Q14204 4646 aaKnown RBP12.31□□□□□ -0.44
SEMA3B-211ENST00000612509 BTF3P20290 206 aaKnown RBP12.31□□□□□ -0.44
SEMA3B-211ENST00000612509 LINC00315P59091 139 aa12.31□□□□□ -0.44
SEMA3B-211ENST00000612509 TPPP3Q9BW30 176 aa12.31□□□□□ -0.44
SEMA3B-211ENST00000612509 EIF5A2Q9GZV4 153 aaKnown RBP12.31□□□□□ -0.44
SEMA3B-211ENST00000612509 GTSF1LQ9H1H1 148 aa12.31□□□□□ -0.44
SEMA3B-211ENST00000612509 Q9UF83 564 aa12.31□□□□□ -0.44
SEMA3B-211ENST00000612509 XKRY2A2RUG3 117 aa12.3□□□□□ -0.44
SEMA3B-211ENST00000612509 NDUFS6O75380 124 aaKnown RBP12.3□□□□□ -0.44
SEMA3B-211ENST00000612509 DNAH10OSP0CZ25 163 aa12.3□□□□□ -0.44
SEMA3B-211ENST00000612509 CEBPGP53567 150 aa12.3□□□□□ -0.44
SEMA3B-211ENST00000612509 TNP2Q05952 138 aa12.3□□□□□ -0.44
SEMA3B-211ENST00000612509 TEX261Q6UWH6 196 aa12.3□□□□□ -0.44
SEMA3B-211ENST00000612509 OCC1Q8TAD7 63 aa12.3□□□□□ -0.44
SEMA3B-211ENST00000612509 AP1S3Q96PC3 154 aa12.3□□□□□ -0.44
SEMA3B-211ENST00000612509 PKD1P98161 4303 aa12.29□□□□□ -0.44
SEMA3B-211ENST00000612509 SSTP61278 116 aa12.29□□□□□ -0.44
SEMA3B-211ENST00000612509 ZNF56Q15929 161 aa12.29□□□□□ -0.44
SEMA3B-211ENST00000612509 OR10J3Q5JRS4 329 aa12.29□□□□□ -0.44
SEMA3B-211ENST00000612509 LELP1Q5T871 98 aa12.29□□□□□ -0.44
SEMA3B-211ENST00000612509 NUDT10Q8NFP7 164 aa12.29□□□□□ -0.44
SEMA3B-211ENST00000612509 NUDT11Q96G61 164 aa12.29□□□□□ -0.44
SEMA3B-211ENST00000612509 RNASE7Q9H1E1 156 aaKnown RBP12.29□□□□□ -0.44
SEMA3B-211ENST00000612509 RPP21Q9H633 154 aaKnown RBP12.29□□□□□ -0.44
SEMA3B-211ENST00000612509 TRAV8-6A0A0B4J262 113 aa12.28□□□□□ -0.44
SEMA3B-211ENST00000612509 TRBV10-1A0A0K0K1A3 114 aa12.28□□□□□ -0.44
SEMA3B-211ENST00000612509 EVI2AP22794 236 aa12.28□□□□□ -0.44
SEMA3B-211ENST00000612509 SRP19P09132 144 aaKnown RBP12.27□□□□□ -0.45
SEMA3B-211ENST00000612509 RAB4BP61018 213 aa12.27□□□□□ -0.45
SEMA3B-211ENST00000612509 CACNG7P62955 275 aa12.27□□□□□ -0.45
SEMA3B-211ENST00000612509 SMIM7Q9BQ49 75 aa12.27□□□□□ -0.45
SEMA3B-211ENST00000612509 PKHD1P08F94 4074 aa12.27□□□□□ -0.45
SEMA3B-211ENST00000612509 TRAV9-2A0A087WT02 112 aa12.26□□□□□ -0.45
SEMA3B-211ENST00000612509 IGHV3-38A0A0C4DH36 116 aa12.26□□□□□ -0.45
SEMA3B-211ENST00000612509 K7EP13 123 aa12.26□□□□□ -0.45
SEMA3B-211ENST00000612509 SMIM17P0DL12 118 aa12.26□□□□□ -0.45
SEMA3B-211ENST00000612509 CTRLP40313 264 aa12.26□□□□□ -0.45
SEMA3B-211ENST00000612509 LINC01556Q5JQF7 62 aa12.26□□□□□ -0.45
SEMA3B-211ENST00000612509 F2Z2F3 143 aa12.25□□□□□ -0.45
SEMA3B-211ENST00000612509 RPL36AP83881 106 aaKnown RBP12.25□□□□□ -0.45
SEMA3B-211ENST00000612509 LYZL1Q6UWQ5 148 aa12.25□□□□□ -0.45
SEMA3B-211ENST00000612509 Q6ZRN7 208 aaPredicted RBP12.25□□□□□ -0.45
SEMA3B-211ENST00000612509 C10orf126Q8N4M7 172 aa12.25□□□□□ -0.45
SEMA3B-211ENST00000612509 OR10G8Q8NGN5 311 aa12.25□□□□□ -0.45
SEMA3B-211ENST00000612509 RPL36ALQ969Q0 106 aaKnown RBP12.25□□□□□ -0.45
SEMA3B-211ENST00000612509 KIF25-AS1Q9Y6Z4 181 aa12.25□□□□□ -0.45
SEMA3B-211ENST00000612509 FAM231DQ6ZW35 169 aa12.24□□□□□ -0.45
SEMA3B-211ENST00000612509 MSRB1Q9NZV6 116 aa12.24□□□□□ -0.45
SEMA3B-211ENST00000612509 TRBV7-3A0A075B6L6 115 aa12.23□□□□□ -0.45
SEMA3B-211ENST00000612509 ZNF727A8MUV8 499 aa12.23□□□□□ -0.45
SEMA3B-211ENST00000612509 F5H697 171 aa12.23□□□□□ -0.45
SEMA3B-211ENST00000612509 UBE2D3P61077 147 aa12.23□□□□□ -0.45
SEMA3B-211ENST00000612509 UBE2D2P62837 147 aa12.23□□□□□ -0.45
SEMA3B-211ENST00000612509 LINC01551Q86U37 167 aa12.23□□□□□ -0.45
SEMA3B-211ENST00000612509 NEXN-AS1Q8NBZ9 246 aa12.23□□□□□ -0.45
SEMA3B-211ENST00000612509 A0A087WWC5 75 aa12.22□□□□□ -0.45
SEMA3B-211ENST00000612509 GATCO43716 136 aaKnown RBP12.22□□□□□ -0.45
SEMA3B-211ENST00000612509 MGPP08493 103 aa12.22□□□□□ -0.45
SEMA3B-211ENST00000612509 TRGC1P0CF51 173 aa12.22□□□□□ -0.45
SEMA3B-211ENST00000612509 CNFNQ9BYD5 112 aa12.22□□□□□ -0.45
SEMA3B-211ENST00000612509 TNFRSF18Q9Y5U5 241 aa12.22□□□□□ -0.45
SEMA3B-211ENST00000612509 IGHV3-30P01768 117 aa12.21□□□□□ -0.45
SEMA3B-211ENST00000612509 IGHV3-33P01772 117 aa12.21□□□□□ -0.45
SEMA3B-211ENST00000612509 IGHV3-30-3P0DP02 117 aa12.21□□□□□ -0.45
SEMA3B-211ENST00000612509 IGHV3-30-5P0DP03 117 aa12.21□□□□□ -0.45
SEMA3B-211ENST00000612509 ERVFC1-1P60608 527 aa12.21□□□□□ -0.45
SEMA3B-211ENST00000612509 NFE4Q86UQ8 179 aa12.21□□□□□ -0.45
SEMA3B-211ENST00000612509 GTSF1Q8WW33 167 aa12.21□□□□□ -0.45
SEMA3B-211ENST00000612509 CT83Q5H943 113 aa12.2□□□□□ -0.46
SEMA3B-211ENST00000612509 WDR73Q6P4I2 378 aa12.2□□□□□ -0.46
SEMA3B-211ENST00000612509 C9JQL5 133 aa12.19□□□□□ -0.46
SEMA3B-211ENST00000612509 NTF3P20783 257 aa12.19□□□□□ -0.46
SEMA3B-211ENST00000612509 SRSF3P84103 164 aaKnown RBP12.19□□□□□ -0.46
SEMA3B-211ENST00000612509 SUMO4Q6EEV6 95 aa12.19□□□□□ -0.46
SEMA3B-211ENST00000612509 Q8N3U1 123 aa12.19□□□□□ -0.46
SEMA3B-211ENST00000612509 DPH3P1Q9H4G8 78 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms