RNA–Protein interactions for RNA: ENST00000612292.1

MMP28-202, Transcript of matrix metallopeptidase 28, humanhuman

TSL 5

Gene MMP28, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-202ENST00000612292 AKAP14Q86UN6 197 aa12.44□□□□□ -0.42
MMP28-202ENST00000612292 ZFP82Q8N141 532 aa12.44□□□□□ -0.42
MMP28-202ENST00000612292 C9orf62Q8N4C0 152 aa12.44□□□□□ -0.42
MMP28-202ENST00000612292 BOLA1Q9Y3E2 137 aa12.44□□□□□ -0.42
MMP28-202ENST00000612292 A0A087WWL8 130 aa12.43□□□□□ -0.42
MMP28-202ENST00000612292 TRAV8-6A0A0B4J262 113 aa12.43□□□□□ -0.42
MMP28-202ENST00000612292 GAGE12JA6NER3 117 aa12.43□□□□□ -0.42
MMP28-202ENST00000612292 GAGE1Q13065 139 aa12.43□□□□□ -0.42
MMP28-202ENST00000612292 GAGE4Q13068 117 aa12.43□□□□□ -0.42
MMP28-202ENST00000612292 GAGE5Q13069 117 aa12.43□□□□□ -0.42
MMP28-202ENST00000612292 GAGE13Q4V321 117 aa12.43□□□□□ -0.42
MMP28-202ENST00000612292 C10orf126Q8N4M7 172 aa12.43□□□□□ -0.42
MMP28-202ENST00000612292 DNAH5Q8TE73 4624 aa12.42□□□□□ -0.42
MMP28-202ENST00000612292 hCG_2014768A0A024R1R8 64 aa12.42□□□□□ -0.42
MMP28-202ENST00000612292 SNAI2O43623 268 aa12.42□□□□□ -0.42
MMP28-202ENST00000612292 MEF2BQ02080 365 aaPredicted RBP12.42□□□□□ -0.42
MMP28-202ENST00000612292 OR10J3Q5JRS4 329 aa12.42□□□□□ -0.42
MMP28-202ENST00000612292 RAB19A4D1S5 217 aa12.41□□□□□ -0.42
MMP28-202ENST00000612292 IBA57-AS1B1ANH7 110 aa12.41□□□□□ -0.42
MMP28-202ENST00000612292 OR5AL1P0C617 328 aa12.41□□□□□ -0.42
MMP28-202ENST00000612292 FAM74A4Q5TZK3 123 aa12.41□□□□□ -0.42
MMP28-202ENST00000612292 PRR27Q6MZM9 219 aa12.41□□□□□ -0.42
MMP28-202ENST00000612292 OR10AG1Q8NH19 301 aa12.41□□□□□ -0.42
MMP28-202ENST00000612292 PDE6DO43924 150 aa12.4□□□□□ -0.42
MMP28-202ENST00000612292 CENPWQ5EE01 88 aa12.4□□□□□ -0.42
MMP28-202ENST00000612292 C19orf71A6NCJ1 209 aa12.39□□□□□ -0.43
MMP28-202ENST00000612292 CDK2AP2O75956 126 aa12.39□□□□□ -0.43
MMP28-202ENST00000612292 BCL2P10415 239 aa12.39□□□□□ -0.43
MMP28-202ENST00000612292 SMIM12Q96EX1 92 aa12.39□□□□□ -0.43
MMP28-202ENST00000612292 KRTAP17-1Q9BYP8 105 aa12.39□□□□□ -0.43
MMP28-202ENST00000612292 PGPEP1Q9NXJ5 209 aa12.39□□□□□ -0.43
MMP28-202ENST00000612292 VAX2Q9UIW0 290 aa12.39□□□□□ -0.43
MMP28-202ENST00000612292 TRBV20OR9-2A0A075B6H5 130 aa12.38□□□□□ -0.43
MMP28-202ENST00000612292 A0A087WTM6 91 aa12.38□□□□□ -0.43
MMP28-202ENST00000612292 IFNA1P01562 189 aa12.38□□□□□ -0.43
MMP28-202ENST00000612292 TRBV10-1A0A0K0K1A3 114 aa12.37□□□□□ -0.43
MMP28-202ENST00000612292 IGHV3-30P01768 117 aa12.37□□□□□ -0.43
MMP28-202ENST00000612292 IGHV3-33P01772 117 aa12.37□□□□□ -0.43
MMP28-202ENST00000612292 IGHV3-30-3P0DP02 117 aa12.37□□□□□ -0.43
MMP28-202ENST00000612292 IGHV3-30-5P0DP03 117 aa12.37□□□□□ -0.43
MMP28-202ENST00000612292 ERVFC1-1P60608 527 aa12.37□□□□□ -0.43
MMP28-202ENST00000612292 RAB4BP61018 213 aa12.37□□□□□ -0.43
MMP28-202ENST00000612292 MED9Q9NWA0 146 aa12.37□□□□□ -0.43
MMP28-202ENST00000612292 HSPG2P98160 4391 aa12.37□□□□□ -0.43
MMP28-202ENST00000612292 A0A087WWC5 75 aa12.36□□□□□ -0.43
MMP28-202ENST00000612292 MUC21A0A0G2JKD1 596 aa12.36□□□□□ -0.43
MMP28-202ENST00000612292 MUC21A0A140T8X8 626 aa12.36□□□□□ -0.43
MMP28-202ENST00000612292 TAGLN2P37802 199 aaKnown RBP12.36□□□□□ -0.43
MMP28-202ENST00000612292 GNG4P50150 75 aa12.36□□□□□ -0.43
MMP28-202ENST00000612292 KIF25-AS1Q9Y6Z4 181 aa12.36□□□□□ -0.43
MMP28-202ENST00000612292 PCLOQ9Y6V0 5065 aa12.36□□□□□ -0.43
MMP28-202ENST00000612292 EREGO14944 169 aa12.35□□□□□ -0.43
MMP28-202ENST00000612292 IGLC6P0CF74 106 aa12.35□□□□□ -0.43
MMP28-202ENST00000612292 SPANXN1Q5VSR9 72 aa12.35□□□□□ -0.43
MMP28-202ENST00000612292 Q8N3U1 123 aa12.35□□□□□ -0.43
MMP28-202ENST00000612292 LYPD6BQ8NI32 183 aa12.35□□□□□ -0.43
MMP28-202ENST00000612292 APOBP04114 4563 aaKnown RBP12.34□□□□□ -0.43
MMP28-202ENST00000612292 TRBV7-3A0A075B6L6 115 aa12.34□□□□□ -0.43
MMP28-202ENST00000612292 A0A1B0GVG6 124 aa12.34□□□□□ -0.43
MMP28-202ENST00000612292 GZMBP10144 247 aa12.34□□□□□ -0.43
MMP28-202ENST00000612292 FUSP35637 526 aaKnown RBP eCLIP12.34□□□□□ -0.43
MMP28-202ENST00000612292 UBE2D3P61077 147 aa12.34□□□□□ -0.43
MMP28-202ENST00000612292 UBE2D2P62837 147 aa12.34□□□□□ -0.43
MMP28-202ENST00000612292 ALKAL2Q6UX46 152 aa12.34□□□□□ -0.43
MMP28-202ENST00000612292 OR10G8Q8NGN5 311 aa12.34□□□□□ -0.43
MMP28-202ENST00000612292 DAZAP1Q96EP5 407 aaKnown RBP12.34□□□□□ -0.43
MMP28-202ENST00000612292 LRCOL1A6NCL2 159 aa12.33□□□□□ -0.44
MMP28-202ENST00000612292 RPS20P60866 119 aaKnown RBP12.33□□□□□ -0.44
MMP28-202ENST00000612292 BLOC1S1P78537 153 aa12.33□□□□□ -0.44
MMP28-202ENST00000612292 RPL36AP83881 106 aaKnown RBP12.33□□□□□ -0.44
MMP28-202ENST00000612292 LAGE3Q14657 143 aa12.33□□□□□ -0.44
MMP28-202ENST00000612292 OR2D3Q8NGH3 330 aa12.33□□□□□ -0.44
MMP28-202ENST00000612292 RPL36ALQ969Q0 106 aaKnown RBP12.33□□□□□ -0.44
MMP28-202ENST00000612292 SSTP61278 116 aa12.32□□□□□ -0.44
MMP28-202ENST00000612292 CDPF1Q6NVV7 123 aa12.32□□□□□ -0.44
MMP28-202ENST00000612292 NEXN-AS1Q8NBZ9 246 aa12.32□□□□□ -0.44
MMP28-202ENST00000612292 KRTAP4-5Q9BYR2 181 aa12.32□□□□□ -0.44
MMP28-202ENST00000612292 RBFOX3A6NFN3 312 aa12.31□□□□□ -0.44
MMP28-202ENST00000612292 DAZ4Q86SG3 579 aaKnown RBP12.31□□□□□ -0.44
MMP28-202ENST00000612292 NIT1Q86X76 327 aa12.31□□□□□ -0.44
MMP28-202ENST00000612292 FER1L6-AS1Q8NA97 138 aa12.31□□□□□ -0.44
MMP28-202ENST00000612292 Q9HAA7 133 aa12.31□□□□□ -0.44
MMP28-202ENST00000612292 BIN3Q9NQY0 253 aa12.31□□□□□ -0.44
MMP28-202ENST00000612292 DAZ3Q9NR90 486 aaKnown RBP12.31□□□□□ -0.44
MMP28-202ENST00000612292 P01737 135 aa12.3□□□□□ -0.44
MMP28-202ENST00000612292 ZNF56Q15929 161 aa12.3□□□□□ -0.44
MMP28-202ENST00000612292 NUDT10Q8NFP7 164 aa12.3□□□□□ -0.44
MMP28-202ENST00000612292 OCC1Q8TAD7 63 aa12.3□□□□□ -0.44
MMP28-202ENST00000612292 NUDT11Q96G61 164 aa12.3□□□□□ -0.44
MMP28-202ENST00000612292 F2Z2F3 143 aa12.29□□□□□ -0.44
MMP28-202ENST00000612292 NKX2-5P52952 324 aaPredicted RBP12.29□□□□□ -0.44
MMP28-202ENST00000612292 XKRY2A2RUG3 117 aa12.28□□□□□ -0.44
MMP28-202ENST00000612292 F5H697 171 aa12.28□□□□□ -0.44
MMP28-202ENST00000612292 K7EN84 100 aa12.28□□□□□ -0.44
MMP28-202ENST00000612292 PSCAO43653 123 aa12.28□□□□□ -0.44
MMP28-202ENST00000612292 CACNG7P62955 275 aa12.28□□□□□ -0.44
MMP28-202ENST00000612292 TRAV8-3A0A0A6YYJ7 113 aa12.27□□□□□ -0.45
MMP28-202ENST00000612292 TMEM250H0YL14 139 aa12.27□□□□□ -0.45
MMP28-202ENST00000612292 LYZL1Q6UWQ5 148 aa12.27□□□□□ -0.45
MMP28-202ENST00000612292 AP1S3Q96PC3 154 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms