RNA–Protein interactions for RNA: ENST00000611279.4

MTHFD1L-211, Transcript of methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene MTHFD1L, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1L-211ENST00000611279 FAM57AQ8TBR7 257 aa13.17□□□□□ -0.3
MTHFD1L-211ENST00000611279 RHODO00212 210 aa13.17□□□□□ -0.3
MTHFD1L-211ENST00000611279 ATP6V0E1O15342 81 aa13.17□□□□□ -0.3
MTHFD1L-211ENST00000611279 TRAV21A0A0B4J279 112 aa13.16□□□□□ -0.3
MTHFD1L-211ENST00000611279 TMEM95Q3KNT9 176 aa13.16□□□□□ -0.3
MTHFD1L-211ENST00000611279 DCHS2Q6V1P9 2916 aa13.16□□□□□ -0.3
MTHFD1L-211ENST00000611279 ATXN8Q156A1 80 aa13.16□□□□□ -0.3
MTHFD1L-211ENST00000611279 LINC01620Q4KN68 170 aa13.16□□□□□ -0.3
MTHFD1L-211ENST00000611279 RBAKDNA6NC62 111 aa13.16□□□□□ -0.3
MTHFD1L-211ENST00000611279 SDHAF1A6NFY7 115 aa13.16□□□□□ -0.3
MTHFD1L-211ENST00000611279 H3BMM0 161 aa13.16□□□□□ -0.3
MTHFD1L-211ENST00000611279 TMEM219Q86XT9 240 aa13.16□□□□□ -0.3
MTHFD1L-211ENST00000611279 UBE2WQ96B02 151 aa13.16□□□□□ -0.3
MTHFD1L-211ENST00000611279 LINC00477Q96M19 166 aa13.16□□□□□ -0.3
MTHFD1L-211ENST00000611279 VMO1Q7Z5L0 202 aa13.15□□□□□ -0.3
MTHFD1L-211ENST00000611279 ZNF580Q9UK33 172 aa13.15□□□□□ -0.3
MTHFD1L-211ENST00000611279 TRAV8-3A0A0A6YYJ7 113 aa13.15□□□□□ -0.3
MTHFD1L-211ENST00000611279 LINC01546A6NGU7 62 aa13.15□□□□□ -0.3
MTHFD1L-211ENST00000611279 TNFRSF13BO14836 293 aaPredicted RBP13.15□□□□□ -0.3
MTHFD1L-211ENST00000611279 FOXC1Q12948 553 aa13.15□□□□□ -0.3
MTHFD1L-211ENST00000611279 IGHV7-81A0A0B4J1V7 117 aa13.15□□□□□ -0.3
MTHFD1L-211ENST00000611279 COL12A1Q99715 3063 aa13.14□□□□□ -0.31
MTHFD1L-211ENST00000611279 Q6ZSV7 163 aa13.14□□□□□ -0.31
MTHFD1L-211ENST00000611279 SLC25A29Q8N8R3 303 aa13.14□□□□□ -0.31
MTHFD1L-211ENST00000611279 CRYGDP07320 174 aa13.14□□□□□ -0.31
MTHFD1L-211ENST00000611279 ZNRF2Q8NHG8 242 aa13.14□□□□□ -0.31
MTHFD1L-211ENST00000611279 CLEC2BQ92478 149 aa13.14□□□□□ -0.31
MTHFD1L-211ENST00000611279 PAPPA-AS1Q5QFB9 102 aa13.14□□□□□ -0.31
MTHFD1L-211ENST00000611279 COX8CQ7Z4L0 72 aa13.14□□□□□ -0.31
MTHFD1L-211ENST00000611279 COX6B1P14854 86 aa13.13□□□□□ -0.31
MTHFD1L-211ENST00000611279 TMEM190Q8WZ59 177 aa13.13□□□□□ -0.31
MTHFD1L-211ENST00000611279 B9A039 149 aa13.13□□□□□ -0.31
MTHFD1L-211ENST00000611279 IGHV3-33P01772 117 aa13.13□□□□□ -0.31
MTHFD1L-211ENST00000611279 A0A0J9YXV3 536 aa13.12□□□□□ -0.31
MTHFD1L-211ENST00000611279 IGFL2Q6UWQ7 119 aa13.12□□□□□ -0.31
MTHFD1L-211ENST00000611279 C20orf173Q96LM9 149 aa13.12□□□□□ -0.31
MTHFD1L-211ENST00000611279 UBTD1Q9HAC8 227 aa13.12□□□□□ -0.31
MTHFD1L-211ENST00000611279 IGHV3-73A0A0B4J1V6 119 aa13.12□□□□□ -0.31
MTHFD1L-211ENST00000611279 LY6LH3BQJ8 138 aa13.12□□□□□ -0.31
MTHFD1L-211ENST00000611279 IGLV4-69A0A075B6H9 119 aa13.11□□□□□ -0.31
MTHFD1L-211ENST00000611279 COX6CP09669 75 aa13.11□□□□□ -0.31
MTHFD1L-211ENST00000611279 SRSF2Q01130 221 aaKnown RBP13.11□□□□□ -0.31
MTHFD1L-211ENST00000611279 EEF1AKMT3Q96AZ1 226 aa13.11□□□□□ -0.31
MTHFD1L-211ENST00000611279 Q6ZS92 163 aa13.11□□□□□ -0.31
MTHFD1L-211ENST00000611279 DAND5Q8N907 189 aa13.11□□□□□ -0.31
MTHFD1L-211ENST00000611279 TSHBP01222 138 aa13.11□□□□□ -0.31
MTHFD1L-211ENST00000611279 CITED1Q99966 193 aa13.11□□□□□ -0.31
MTHFD1L-211ENST00000611279 LINC01619G3V211 115 aa13.1□□□□□ -0.31
MTHFD1L-211ENST00000611279 RPL13AP40429 203 aaKnown RBP13.1□□□□□ -0.31
MTHFD1L-211ENST00000611279 PRR30Q53SZ7 412 aaPredicted RBP13.1□□□□□ -0.31
MTHFD1L-211ENST00000611279 NPBQ8NG41 125 aa13.1□□□□□ -0.31
MTHFD1L-211ENST00000611279 ZFAND3Q9H8U3 227 aa13.1□□□□□ -0.31
MTHFD1L-211ENST00000611279 VCYO14598 125 aa13.09□□□□□ -0.31
MTHFD1L-211ENST00000611279 MUC6Q6W4X9 2439 aa13.09□□□□□ -0.31
MTHFD1L-211ENST00000611279 GRNP28799 593 aaKnown RBP13.09□□□□□ -0.31
MTHFD1L-211ENST00000611279 TRIAP1O43715 76 aa13.09□□□□□ -0.31
MTHFD1L-211ENST00000611279 RS1O15537 224 aa13.08□□□□□ -0.31
MTHFD1L-211ENST00000611279 SUMO4Q6EEV6 95 aa13.08□□□□□ -0.31
MTHFD1L-211ENST00000611279 CCDC140Q96MF4 163 aa13.08□□□□□ -0.31
MTHFD1L-211ENST00000611279 PRRC2AP48634 2157 aaKnown RBP13.08□□□□□ -0.31
MTHFD1L-211ENST00000611279 ZNF625Q96I27 306 aaPredicted RBP13.08□□□□□ -0.32
MTHFD1L-211ENST00000611279 CLPSL1A2RUU4 121 aa13.07□□□□□ -0.32
MTHFD1L-211ENST00000611279 A8MZ25 164 aa13.07□□□□□ -0.32
MTHFD1L-211ENST00000611279 MRPL23Q16540 153 aaKnown RBP13.07□□□□□ -0.32
MTHFD1L-211ENST00000611279 TRAV12-2A0A075B6T6 113 aa13.07□□□□□ -0.32
MTHFD1L-211ENST00000611279 C9orf47Q6ZRZ4 202 aa13.07□□□□□ -0.32
MTHFD1L-211ENST00000611279 UBE2E1P51965 193 aa13.07□□□□□ -0.32
MTHFD1L-211ENST00000611279 PSMG3-AS1Q96PY0 264 aa13.07□□□□□ -0.32
MTHFD1L-211ENST00000611279 PPP1R17O96001 155 aa13.06□□□□□ -0.32
MTHFD1L-211ENST00000611279 CEMP1Q6PRD7 247 aaPredicted RBP13.06□□□□□ -0.32
MTHFD1L-211ENST00000611279 DUX5Q96PT3 197 aa13.06□□□□□ -0.32
MTHFD1L-211ENST00000611279 FAM236AA0A1B0GUQ0 79 aa13.06□□□□□ -0.32
MTHFD1L-211ENST00000611279 FAM236BA0A1B0GV22 79 aa13.06□□□□□ -0.32
MTHFD1L-211ENST00000611279 M0R2P5 195 aa13.06□□□□□ -0.32
MTHFD1L-211ENST00000611279 UNQ9165/PRO28630Q6UXU0 137 aa13.06□□□□□ -0.32
MTHFD1L-211ENST00000611279 TRBV12-3P01733 135 aa13.05□□□□□ -0.32
MTHFD1L-211ENST00000611279 Q8N9W7 124 aa13.05□□□□□ -0.32
MTHFD1L-211ENST00000611279 ODF3Q96PU9 254 aa13.05□□□□□ -0.32
MTHFD1L-211ENST00000611279 PTPRQQ9UMZ3 2332 aa13.05□□□□□ -0.32
MTHFD1L-211ENST00000611279 ZNF292O60281 2723 aa13.05□□□□□ -0.32
MTHFD1L-211ENST00000611279 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.05□□□□□ -0.32
MTHFD1L-211ENST00000611279 ZNF876PQ49A33 203 aa13.05□□□□□ -0.32
MTHFD1L-211ENST00000611279 ZFAND2AQ8N6M9 145 aa13.05□□□□□ -0.32
MTHFD1L-211ENST00000611279 CUBNO60494 3623 aa13.05□□□□□ -0.32
MTHFD1L-211ENST00000611279 WNK1Q9H4A3 2382 aa13.04□□□□□ -0.32
MTHFD1L-211ENST00000611279 IGF2RP11717 2491 aa13.04□□□□□ -0.32
MTHFD1L-211ENST00000611279 GPHB5Q86YW7 130 aa13.04□□□□□ -0.32
MTHFD1L-211ENST00000611279 TMEM263Q8WUH6 116 aaKnown RBP13.04□□□□□ -0.32
MTHFD1L-211ENST00000611279 ZNF22P17026 224 aaPredicted RBP13.04□□□□□ -0.32
MTHFD1L-211ENST00000611279 LY6EQ16553 131 aa13.04□□□□□ -0.32
MTHFD1L-211ENST00000611279 C9orf139Q6ZV77 190 aa13.04□□□□□ -0.32
MTHFD1L-211ENST00000611279 TRBV10-2A0A0K0K1G8 114 aa13.03□□□□□ -0.32
MTHFD1L-211ENST00000611279 IGIPA6NJ69 53 aa13.03□□□□□ -0.32
MTHFD1L-211ENST00000611279 TRGV11A0A075B6L2 103 aa13.03□□□□□ -0.32
MTHFD1L-211ENST00000611279 PF4V1P10720 104 aa13.03□□□□□ -0.32
MTHFD1L-211ENST00000611279 CD28P10747 220 aa13.03□□□□□ -0.32
MTHFD1L-211ENST00000611279 RNASE3P12724 160 aaKnown RBP13.03□□□□□ -0.32
MTHFD1L-211ENST00000611279 FAM110DQ8TAY7 271 aaPredicted RBP13.03□□□□□ -0.32
MTHFD1L-211ENST00000611279 MUC4Q99102 2169 aa13.03□□□□□ -0.32
MTHFD1L-211ENST00000611279 TIMM21Q9BVV7 248 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms