RNA–Protein interactions for RNA: ENST00000607427.1

CTSS-206, Transcript of cathepsin S, humanhuman

TSL 2

Gene CTSS, Length 390 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSS-206ENST00000607427 HSD17B12Q53GQ0 312 aa-1.1□□□□□ -2.59
CTSS-206ENST00000607427 SLC48A1Q6P1K1 146 aa-1.1□□□□□ -2.59
CTSS-206ENST00000607427 CNFNQ9BYD5 112 aa-1.1□□□□□ -2.59
CTSS-206ENST00000607427 METTL1Q9UBP6 276 aaKnown RBP-1.1□□□□□ -2.59
CTSS-206ENST00000607427 ZNF142P52746 1687 aaPredicted RBP-1.1□□□□□ -2.59
CTSS-206ENST00000607427 KIAA0100Q14667 2235 aaKnown RBP-1.11□□□□□ -2.59
CTSS-206ENST00000607427 TRGV1A0A0A0MS02 117 aa-1.11□□□□□ -2.59
CTSS-206ENST00000607427 A0A1B0GW64 132 aa-1.11□□□□□ -2.59
CTSS-206ENST00000607427 Q5VSD8 79 aa-1.11□□□□□ -2.59
CTSS-206ENST00000607427 C20orf197Q8N268 126 aa-1.11□□□□□ -2.59
CTSS-206ENST00000607427 COX7B2Q8TF08 81 aa-1.11□□□□□ -2.59
CTSS-206ENST00000607427 TAS2R8Q9NYW2 309 aa-1.11□□□□□ -2.59
CTSS-206ENST00000607427 V9GYV3 84 aa-1.11□□□□□ -2.59
CTSS-206ENST00000607427 GOLGA3Q08378 1498 aa-1.12□□□□□ -2.59
CTSS-206ENST00000607427 NBEAL1Q6ZS30 2694 aa-1.12□□□□□ -2.59
CTSS-206ENST00000607427 A0A0D9SFI3 127 aa-1.12□□□□□ -2.59
CTSS-206ENST00000607427 FAM107AO95990 144 aa-1.12□□□□□ -2.59
CTSS-206ENST00000607427 LRP1BQ9NZR2 4599 aa-1.12□□□□□ -2.59
CTSS-206ENST00000607427 ZCCHC11Q5TAX3 1644 aaKnown RBP-1.12□□□□□ -2.59
CTSS-206ENST00000607427 PTPRMP28827 1452 aa-1.12□□□□□ -2.59
CTSS-206ENST00000607427 PHIPQ8WWQ0 1821 aa-1.12□□□□□ -2.59
CTSS-206ENST00000607427 CCDC171Q6TFL3 1326 aa-1.13□□□□□ -2.59
CTSS-206ENST00000607427 ARHGAP31Q2M1Z3 1444 aa-1.13□□□□□ -2.59
CTSS-206ENST00000607427 TMEM238C9JI98 176 aa-1.13□□□□□ -2.59
CTSS-206ENST00000607427 G3V318 75 aa-1.13□□□□□ -2.59
CTSS-206ENST00000607427 HIST1H1BP16401 226 aaKnown RBP-1.13□□□□□ -2.59
CTSS-206ENST00000607427 SPRR1AP35321 89 aa-1.13□□□□□ -2.59
CTSS-206ENST00000607427 SLC35B3Q9H1N7 401 aa-1.13□□□□□ -2.59
CTSS-206ENST00000607427 FLNBO75369 2602 aaKnown RBP-1.13□□□□□ -2.59
CTSS-206ENST00000607427 SETXQ7Z333 2677 aaKnown RBP-1.13□□□□□ -2.59
CTSS-206ENST00000607427 E7EQ34 232 aa-1.14□□□□□ -2.59
CTSS-206ENST00000607427 DEGS1O15121 323 aa-1.14□□□□□ -2.59
CTSS-206ENST00000607427 PSPHP78330 225 aa-1.14□□□□□ -2.59
CTSS-206ENST00000607427 TRIQKQ629K1 86 aa-1.14□□□□□ -2.59
CTSS-206ENST00000607427 NDUFA11Q86Y39 141 aa-1.14□□□□□ -2.59
CTSS-206ENST00000607427 SNX29P2Q8IUI4 249 aa-1.14□□□□□ -2.59
CTSS-206ENST00000607427 MNS1Q8NEH6 495 aa-1.14□□□□□ -2.59
CTSS-206ENST00000607427 BATF3Q9NR55 127 aa-1.14□□□□□ -2.59
CTSS-206ENST00000607427 MED23Q9ULK4 1368 aa-1.14□□□□□ -2.59
CTSS-206ENST00000607427 TRAV2A0A0B4J234 112 aa-1.15□□□□□ -2.59
CTSS-206ENST00000607427 PFDN1O60925 122 aa-1.15□□□□□ -2.59
CTSS-206ENST00000607427 SPINK8P0C7L1 97 aa-1.15□□□□□ -2.59
CTSS-206ENST00000607427 DYNLRB2Q8TF09 96 aa-1.15□□□□□ -2.59
CTSS-206ENST00000607427 CCDC115Q96NT0 180 aa-1.15□□□□□ -2.59
CTSS-206ENST00000607427 USF3Q68DE3 2245 aa-1.15□□□□□ -2.59
CTSS-206ENST00000607427 GVINP1Q7Z2Y8 2422 aa-1.16□□□□□ -2.59
CTSS-206ENST00000607427 KDM5CP41229 1560 aa-1.16□□□□□ -2.59
CTSS-206ENST00000607427 STAB2Q8WWQ8 2551 aa-1.16□□□□□ -2.59
CTSS-206ENST00000607427 MRPS15P82914 257 aaKnown RBP-1.16□□□□□ -2.6
CTSS-206ENST00000607427 Q8IZM0 81 aa-1.16□□□□□ -2.6
CTSS-206ENST00000607427 ARAP1Q96P48 1450 aa-1.17□□□□□ -2.6
CTSS-206ENST00000607427 NF1P21359 2839 aa-1.17□□□□□ -2.6
CTSS-206ENST00000607427 TRAV22A0A0B4J277 110 aa-1.17□□□□□ -2.6
CTSS-206ENST00000607427 E2F6O75461 281 aa-1.17□□□□□ -2.6
CTSS-206ENST00000607427 G0S2P27469 103 aa-1.17□□□□□ -2.6
CTSS-206ENST00000607427 SPRR2BP35325 72 aa-1.17□□□□□ -2.6
CTSS-206ENST00000607427 ERG28Q9UKR5 140 aa-1.17□□□□□ -2.6
CTSS-206ENST00000607427 NOP16Q9Y3C1 178 aaKnown RBP-1.17□□□□□ -2.6
CTSS-206ENST00000607427 DNAJC15Q9Y5T4 150 aa-1.17□□□□□ -2.6
CTSS-206ENST00000607427 ATRQ13535 2644 aa-1.17□□□□□ -2.6
CTSS-206ENST00000607427 SPTA1P02549 2419 aa-1.17□□□□□ -2.6
CTSS-206ENST00000607427 ARFGEF1Q9Y6D6 1849 aa-1.17□□□□□ -2.6
CTSS-206ENST00000607427 NRXN2Q9P2S2 1712 aa-1.18□□□□□ -2.6
CTSS-206ENST00000607427 TRAV12-3A0A0B4J271 114 aa-1.18□□□□□ -2.6
CTSS-206ENST00000607427 SPCS2Q15005 226 aa-1.18□□□□□ -2.6
CTSS-206ENST00000607427 TMEM91Q6ZNR0 172 aa-1.18□□□□□ -2.6
CTSS-206ENST00000607427 PCBD2Q9H0N5 130 aa-1.18□□□□□ -2.6
CTSS-206ENST00000607427 SCP2D1Q9UJQ7 156 aa-1.18□□□□□ -2.6
CTSS-206ENST00000607427 TRBV10-3A0A0K0K1G6 114 aa-1.19□□□□□ -2.6
CTSS-206ENST00000607427 OR9Q1Q8NGQ5 310 aa-1.19□□□□□ -2.6
CTSS-206ENST00000607427 ATP6V0E2Q8NHE4 81 aa-1.19□□□□□ -2.6
CTSS-206ENST00000607427 ATPIF1Q9UII2 106 aa-1.19□□□□□ -2.6
CTSS-206ENST00000607427 EP300Q09472 2414 aaPredicted RBP-1.19□□□□□ -2.6
CTSS-206ENST00000607427 PARP14Q460N5 1801 aa-1.19□□□□□ -2.6
CTSS-206ENST00000607427 ROCK1Q13464 1354 aa-1.2□□□□□ -2.6
CTSS-206ENST00000607427 TRAV1-2A0A0B4J238 106 aa-1.2□□□□□ -2.6
CTSS-206ENST00000607427 MT-ND4LP03901 98 aa-1.2□□□□□ -2.6
CTSS-206ENST00000607427 CALML5Q9NZT1 146 aa-1.2□□□□□ -2.6
CTSS-206ENST00000607427 CHD8Q9HCK8 2581 aa-1.21□□□□□ -2.6
CTSS-206ENST00000607427 GNG10P50151 68 aa-1.21□□□□□ -2.6
CTSS-206ENST00000607427 EDDM3BP56851 147 aa-1.21□□□□□ -2.6
CTSS-206ENST00000607427 ZMYM4Q5VZL5 1548 aa-1.21□□□□□ -2.6
CTSS-206ENST00000607427 PAEPP09466 180 aa-1.22□□□□□ -2.6
CTSS-206ENST00000607427 CLLU1Q5K131 121 aa-1.22□□□□□ -2.6
CTSS-206ENST00000607427 CDC26Q8NHZ8 85 aa-1.22□□□□□ -2.6
CTSS-206ENST00000607427 BANF2Q9H503 90 aa-1.22□□□□□ -2.6
CTSS-206ENST00000607427 XIRP1Q702N8 1843 aaKnown RBP-1.22□□□□□ -2.61
CTSS-206ENST00000607427 MYO7BQ6PIF6 2116 aa-1.22□□□□□ -2.61
CTSS-206ENST00000607427 OVOS2A0A0G2JMS6 1433 aa-1.23□□□□□ -2.61
CTSS-206ENST00000607427 UHRF1BP1LA0JNW5 1464 aa-1.23□□□□□ -2.61
CTSS-206ENST00000607427 BORCS7-ASMTA0A0B4J1R7 106 aa-1.23□□□□□ -2.61
CTSS-206ENST00000607427 CCDC179H3BU77 68 aa-1.23□□□□□ -2.61
CTSS-206ENST00000607427 DPM2O94777 84 aa-1.23□□□□□ -2.61
CTSS-206ENST00000607427 RBP4P02753 201 aa-1.23□□□□□ -2.61
CTSS-206ENST00000607427 HLA-DRB4P13762 266 aa-1.23□□□□□ -2.61
CTSS-206ENST00000607427 SAMD13Q5VXD3 122 aa-1.23□□□□□ -2.61
CTSS-206ENST00000607427 TMEM35BQ8NCS4 154 aa-1.23□□□□□ -2.61
CTSS-206ENST00000607427 WFDC6Q9BQY6 131 aa-1.23□□□□□ -2.61
CTSS-206ENST00000607427 HLA-DRB4X5D2U9 266 aa-1.23□□□□□ -2.61
CTSS-206ENST00000607427 CNOT1A5YKK6 2376 aaKnown RBP-1.23□□□□□ -2.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms