RNA–Protein interactions for RNA: ENST00000606878.1

LINC00240-203, long intergenic non-protein coding RNA 240, humanhuman

TSL 1 (best)

Gene LINC00240, Length 927 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00240-203ENST00000606878 LYPD6BQ8NI32 183 aa11.31□□□□□ -0.6
LINC00240-203ENST00000606878 DNAH2Q9P225 4427 aa11.3□□□□□ -0.6
LINC00240-203ENST00000606878 TRAV8-6A0A0B4J262 113 aa11.3□□□□□ -0.6
LINC00240-203ENST00000606878 OR5AL1P0C617 328 aa11.3□□□□□ -0.6
LINC00240-203ENST00000606878 SPANXN1Q5VSR9 72 aa11.3□□□□□ -0.6
LINC00240-203ENST00000606878 GTSF1LQ9H1H1 148 aa11.3□□□□□ -0.6
LINC00240-203ENST00000606878 DNAH17Q9UFH2 4485 aa11.29□□□□□ -0.6
LINC00240-203ENST00000606878 GAGE12JA6NER3 117 aa11.29□□□□□ -0.6
LINC00240-203ENST00000606878 SNAI2O43623 268 aa11.29□□□□□ -0.6
LINC00240-203ENST00000606878 TNP2Q05952 138 aa11.29□□□□□ -0.6
LINC00240-203ENST00000606878 GAGE1Q13065 139 aa11.29□□□□□ -0.6
LINC00240-203ENST00000606878 GAGE4Q13068 117 aa11.29□□□□□ -0.6
LINC00240-203ENST00000606878 GAGE5Q13069 117 aa11.29□□□□□ -0.6
LINC00240-203ENST00000606878 GAGE13Q4V321 117 aa11.29□□□□□ -0.6
LINC00240-203ENST00000606878 WFDC10BQ8IUB3 73 aa11.29□□□□□ -0.6
LINC00240-203ENST00000606878 C14orf178Q8N769 122 aaPredicted RBP11.29□□□□□ -0.6
LINC00240-203ENST00000606878 OR2D3Q8NGH3 330 aa11.29□□□□□ -0.6
LINC00240-203ENST00000606878 OR10AG1Q8NH19 301 aa11.29□□□□□ -0.6
LINC00240-203ENST00000606878 TRBV20OR9-2A0A075B6H5 130 aa11.28□□□□□ -0.6
LINC00240-203ENST00000606878 XKRY2A2RUG3 117 aa11.28□□□□□ -0.6
LINC00240-203ENST00000606878 C19orf71A6NCJ1 209 aa11.28□□□□□ -0.6
LINC00240-203ENST00000606878 TMEM250H0YL14 139 aa11.28□□□□□ -0.6
LINC00240-203ENST00000606878 P01737 135 aa11.28□□□□□ -0.6
LINC00240-203ENST00000606878 DNAH10OSP0CZ25 163 aa11.28□□□□□ -0.6
LINC00240-203ENST00000606878 SSTP61278 116 aa11.28□□□□□ -0.6
LINC00240-203ENST00000606878 OR10J3Q5JRS4 329 aa11.28□□□□□ -0.6
LINC00240-203ENST00000606878 IGHV3-38A0A0C4DH36 116 aa11.27□□□□□ -0.61
LINC00240-203ENST00000606878 MUC21A0A0G2JKD1 596 aa11.27□□□□□ -0.61
LINC00240-203ENST00000606878 MUC21A0A140T8X8 626 aa11.27□□□□□ -0.61
LINC00240-203ENST00000606878 LINC00315P59091 139 aa11.27□□□□□ -0.61
LINC00240-203ENST00000606878 LELP1Q5T871 98 aa11.27□□□□□ -0.61
LINC00240-203ENST00000606878 OCC1Q8TAD7 63 aa11.27□□□□□ -0.61
LINC00240-203ENST00000606878 EIF5A2Q9GZV4 153 aaKnown RBP11.27□□□□□ -0.61
LINC00240-203ENST00000606878 GZMBP10144 247 aa11.26□□□□□ -0.61
LINC00240-203ENST00000606878 RAB4BP61018 213 aa11.26□□□□□ -0.61
LINC00240-203ENST00000606878 NFE4Q86UQ8 179 aa11.26□□□□□ -0.61
LINC00240-203ENST00000606878 C10orf126Q8N4M7 172 aa11.26□□□□□ -0.61
LINC00240-203ENST00000606878 FER1L6-AS1Q8NA97 138 aa11.26□□□□□ -0.61
LINC00240-203ENST00000606878 TPPP3Q9BW30 176 aa11.26□□□□□ -0.61
LINC00240-203ENST00000606878 Q9UF83 564 aa11.26□□□□□ -0.61
LINC00240-203ENST00000606878 TRBV10-1A0A0K0K1A3 114 aa11.25□□□□□ -0.61
LINC00240-203ENST00000606878 F2Z2F3 143 aa11.25□□□□□ -0.61
LINC00240-203ENST00000606878 SMIM17P0DL12 118 aa11.25□□□□□ -0.61
LINC00240-203ENST00000606878 NUDT10Q8NFP7 164 aa11.25□□□□□ -0.61
LINC00240-203ENST00000606878 NUDT11Q96G61 164 aa11.25□□□□□ -0.61
LINC00240-203ENST00000606878 FAT2Q9NYQ8 4349 aa11.24□□□□□ -0.61
LINC00240-203ENST00000606878 A0A087WWC5 75 aa11.24□□□□□ -0.61
LINC00240-203ENST00000606878 F5H697 171 aa11.24□□□□□ -0.61
LINC00240-203ENST00000606878 CACNG7P62955 275 aa11.24□□□□□ -0.61
LINC00240-203ENST00000606878 MSRB1Q9NZV6 116 aa11.24□□□□□ -0.61
LINC00240-203ENST00000606878 NDUFS6O75380 124 aaKnown RBP11.23□□□□□ -0.61
LINC00240-203ENST00000606878 IGLC6P0CF74 106 aa11.23□□□□□ -0.61
LINC00240-203ENST00000606878 LINC00694P0DN24 101 aa11.23□□□□□ -0.61
LINC00240-203ENST00000606878 CEBPGP53567 150 aa11.23□□□□□ -0.61
LINC00240-203ENST00000606878 RPL36AP83881 106 aaKnown RBP11.23□□□□□ -0.61
LINC00240-203ENST00000606878 ZNF56Q15929 161 aa11.23□□□□□ -0.61
LINC00240-203ENST00000606878 LINC01556Q5JQF7 62 aa11.23□□□□□ -0.61
LINC00240-203ENST00000606878 TOR2AQ5JU69 321 aa11.23□□□□□ -0.61
LINC00240-203ENST00000606878 RPL36ALQ969Q0 106 aaKnown RBP11.23□□□□□ -0.61
LINC00240-203ENST00000606878 TNFRSF18Q9Y5U5 241 aa11.23□□□□□ -0.61
LINC00240-203ENST00000606878 TRBV7-3A0A075B6L6 115 aa11.22□□□□□ -0.61
LINC00240-203ENST00000606878 FAM210AQ96ND0 272 aa11.22□□□□□ -0.61
LINC00240-203ENST00000606878 AP1S3Q96PC3 154 aa11.22□□□□□ -0.61
LINC00240-203ENST00000606878 K7EN84 100 aa11.21□□□□□ -0.61
LINC00240-203ENST00000606878 WDR73Q6P4I2 378 aa11.21□□□□□ -0.61
LINC00240-203ENST00000606878 RNASE7Q9H1E1 156 aaKnown RBP11.21□□□□□ -0.61
LINC00240-203ENST00000606878 TEX261Q6UWH6 196 aa11.2□□□□□ -0.62
LINC00240-203ENST00000606878 LYZL1Q6UWQ5 148 aa11.2□□□□□ -0.62
LINC00240-203ENST00000606878 Q6ZRN7 208 aaPredicted RBP11.2□□□□□ -0.62
LINC00240-203ENST00000606878 OR10G8Q8NGN5 311 aa11.2□□□□□ -0.62
LINC00240-203ENST00000606878 RPP21Q9H633 154 aaKnown RBP11.2□□□□□ -0.62
LINC00240-203ENST00000606878 KIF25-AS1Q9Y6Z4 181 aa11.2□□□□□ -0.62
LINC00240-203ENST00000606878 HECTD4Q9Y4D8 3996 aa11.19□□□□□ -0.62
LINC00240-203ENST00000606878 IBA57-AS1B1ANH7 110 aa11.19□□□□□ -0.62
LINC00240-203ENST00000606878 EREGO14944 169 aa11.19□□□□□ -0.62
LINC00240-203ENST00000606878 IGHV3-30P01768 117 aa11.19□□□□□ -0.62
LINC00240-203ENST00000606878 IGHV3-33P01772 117 aa11.19□□□□□ -0.62
LINC00240-203ENST00000606878 IGHV3-30-3P0DP02 117 aa11.19□□□□□ -0.62
LINC00240-203ENST00000606878 IGHV3-30-5P0DP03 117 aa11.19□□□□□ -0.62
LINC00240-203ENST00000606878 UBE2D3P61077 147 aa11.19□□□□□ -0.62
LINC00240-203ENST00000606878 UBE2D2P62837 147 aa11.19□□□□□ -0.62
LINC00240-203ENST00000606878 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.19□□□□□ -0.62
LINC00240-203ENST00000606878 SMIM7Q9BQ49 75 aa11.19□□□□□ -0.62
LINC00240-203ENST00000606878 ZNF727A8MUV8 499 aa11.18□□□□□ -0.62
LINC00240-203ENST00000606878 GATCO43716 136 aaKnown RBP11.18□□□□□ -0.62
LINC00240-203ENST00000606878 SRP19P09132 144 aaKnown RBP11.18□□□□□ -0.62
LINC00240-203ENST00000606878 NTF3P20783 257 aa11.18□□□□□ -0.62
LINC00240-203ENST00000606878 TRGC1P0CF51 173 aa11.17□□□□□ -0.62
LINC00240-203ENST00000606878 ERVFC1-1P60608 527 aa11.17□□□□□ -0.62
LINC00240-203ENST00000606878 FAM231DQ6ZW35 169 aa11.17□□□□□ -0.62
LINC00240-203ENST00000606878 SPATA12Q7Z6I5 190 aa11.17□□□□□ -0.62
LINC00240-203ENST00000606878 NEXN-AS1Q8NBZ9 246 aa11.17□□□□□ -0.62
LINC00240-203ENST00000606878 C16orf90A8MZG2 172 aa11.16□□□□□ -0.62
LINC00240-203ENST00000606878 H7C1H1 209 aa11.16□□□□□ -0.62
LINC00240-203ENST00000606878 MGPP08493 103 aa11.16□□□□□ -0.62
LINC00240-203ENST00000606878 TWIST1Q15672 202 aa11.16□□□□□ -0.62
LINC00240-203ENST00000606878 URGCP-MRPS24S4R325 110 aa11.16□□□□□ -0.62
LINC00240-203ENST00000606878 A8MWL6 223 aa11.15□□□□□ -0.62
LINC00240-203ENST00000606878 CTRLP40313 264 aa11.15□□□□□ -0.62
LINC00240-203ENST00000606878 PEA15Q15121 130 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 135.9 ms