RNA–Protein interactions for RNA: ENST00000604967.1

TUBE1-210, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-210ENST00000604967 SSBP4Q9BWG4 385 aaPredicted RBP7.15□□□□□ -1.26
TUBE1-210ENST00000604967 GTSF1LQ9H1H1 148 aa7.15□□□□□ -1.26
TUBE1-210ENST00000604967 MSRB1Q9NZV6 116 aa7.15□□□□□ -1.26
TUBE1-210ENST00000604967 A0A087WTM6 91 aa7.14□□□□□ -1.27
TUBE1-210ENST00000604967 IGHV3-38A0A0C4DH36 116 aa7.14□□□□□ -1.27
TUBE1-210ENST00000604967 SNAI2O43623 268 aa7.14□□□□□ -1.27
TUBE1-210ENST00000604967 NKX2-5P52952 324 aaPredicted RBP7.14□□□□□ -1.27
TUBE1-210ENST00000604967 WFDC2Q14508 124 aa7.14□□□□□ -1.27
TUBE1-210ENST00000604967 CENPWQ5EE01 88 aa7.14□□□□□ -1.27
TUBE1-210ENST00000604967 LINC01556Q5JQF7 62 aa7.14□□□□□ -1.27
TUBE1-210ENST00000604967 LELP1Q5T871 98 aa7.14□□□□□ -1.27
TUBE1-210ENST00000604967 FAM74A4Q5TZK3 123 aa7.14□□□□□ -1.27
TUBE1-210ENST00000604967 PRR27Q6MZM9 219 aa7.14□□□□□ -1.27
TUBE1-210ENST00000604967 ATP6V0E2Q8NHE4 81 aa7.14□□□□□ -1.27
TUBE1-210ENST00000604967 PRADC1Q9BSG0 188 aa7.14□□□□□ -1.27
TUBE1-210ENST00000604967 BOLA1Q9Y3E2 137 aa7.14□□□□□ -1.27
TUBE1-210ENST00000604967 KIF25-AS1Q9Y6Z4 181 aa7.14□□□□□ -1.27
TUBE1-210ENST00000604967 C19orf71A6NCJ1 209 aa7.13□□□□□ -1.27
TUBE1-210ENST00000604967 LRCOL1A6NCL2 159 aa7.13□□□□□ -1.27
TUBE1-210ENST00000604967 CIDEAO60543 219 aa7.13□□□□□ -1.27
TUBE1-210ENST00000604967 IGHV3-30P01768 117 aa7.13□□□□□ -1.27
TUBE1-210ENST00000604967 IGHV3-33P01772 117 aa7.13□□□□□ -1.27
TUBE1-210ENST00000604967 S100A9P06702 114 aaKnown RBP7.13□□□□□ -1.27
TUBE1-210ENST00000604967 IGHV3-30-3P0DP02 117 aa7.13□□□□□ -1.27
TUBE1-210ENST00000604967 IGHV3-30-5P0DP03 117 aa7.13□□□□□ -1.27
TUBE1-210ENST00000604967 EIF5AP63241 154 aaKnown RBP7.13□□□□□ -1.27
TUBE1-210ENST00000604967 SLC51BQ86UW2 128 aa7.13□□□□□ -1.27
TUBE1-210ENST00000604967 MAPKAPK5-AS1Q8N8E1 139 aa7.13□□□□□ -1.27
TUBE1-210ENST00000604967 MANBALQ9NQG1 85 aa7.13□□□□□ -1.27
TUBE1-210ENST00000604967 PHLDA3Q9Y5J5 127 aa7.13□□□□□ -1.27
TUBE1-210ENST00000604967 DNAH8Q96JB1 4490 aa7.12□□□□□ -1.27
TUBE1-210ENST00000604967 RBFOX3A6NFN3 312 aa7.12□□□□□ -1.27
TUBE1-210ENST00000604967 IBA57-AS1B1ANH7 110 aa7.12□□□□□ -1.27
TUBE1-210ENST00000604967 CDK2AP2O75956 126 aa7.12□□□□□ -1.27
TUBE1-210ENST00000604967 BCL2P10415 239 aa7.12□□□□□ -1.27
TUBE1-210ENST00000604967 RAB5CP51148 216 aa7.12□□□□□ -1.27
TUBE1-210ENST00000604967 KRTAP10-1P60331 282 aa7.12□□□□□ -1.27
TUBE1-210ENST00000604967 SSTP61278 116 aa7.12□□□□□ -1.27
TUBE1-210ENST00000604967 OR10J3Q5JRS4 329 aa7.12□□□□□ -1.27
TUBE1-210ENST00000604967 SH2D6Q7Z4S9 175 aa7.12□□□□□ -1.27
TUBE1-210ENST00000604967 AKAP14Q86UN6 197 aa7.12□□□□□ -1.27
TUBE1-210ENST00000604967 ZFP82Q8N141 532 aa7.12□□□□□ -1.27
TUBE1-210ENST00000604967 VPS13BQ7Z7G8 4022 aa7.12□□□□□ -1.27
TUBE1-210ENST00000604967 CXCL1P09341 107 aa7.11□□□□□ -1.27
TUBE1-210ENST00000604967 OR5AL1P0C617 328 aa7.11□□□□□ -1.27
TUBE1-210ENST00000604967 IGLC6P0CF74 106 aa7.11□□□□□ -1.27
TUBE1-210ENST00000604967 EVI2AP22794 236 aa7.11□□□□□ -1.27
TUBE1-210ENST00000604967 MEF2BQ02080 365 aaPredicted RBP7.11□□□□□ -1.27
TUBE1-210ENST00000604967 ALKAL2Q6UX46 152 aa7.11□□□□□ -1.27
TUBE1-210ENST00000604967 DAZ4Q86SG3 579 aaKnown RBP7.11□□□□□ -1.27
TUBE1-210ENST00000604967 SYT8Q8NBV8 401 aa7.11□□□□□ -1.27
TUBE1-210ENST00000604967 DAZ3Q9NR90 486 aaKnown RBP7.11□□□□□ -1.27
TUBE1-210ENST00000604967 K7EN84 100 aa7.1□□□□□ -1.27
TUBE1-210ENST00000604967 RHODO00212 210 aa7.1□□□□□ -1.27
TUBE1-210ENST00000604967 XGP55808 180 aa7.1□□□□□ -1.27
TUBE1-210ENST00000604967 UBE2D3P61077 147 aa7.1□□□□□ -1.27
TUBE1-210ENST00000604967 UBE2D2P62837 147 aa7.1□□□□□ -1.27
TUBE1-210ENST00000604967 NEXN-AS1Q8NBZ9 246 aa7.1□□□□□ -1.27
TUBE1-210ENST00000604967 Q9HAA7 133 aa7.1□□□□□ -1.27
TUBE1-210ENST00000604967 FAT1Q14517 4588 aa7.1□□□□□ -1.27
TUBE1-210ENST00000604967 TRAV9-2A0A087WT02 112 aa7.09□□□□□ -1.27
TUBE1-210ENST00000604967 TRAV8-6A0A0B4J262 113 aa7.09□□□□□ -1.27
TUBE1-210ENST00000604967 K7EP13 123 aa7.09□□□□□ -1.27
TUBE1-210ENST00000604967 EIF5AL1Q6IS14 154 aaKnown RBP7.09□□□□□ -1.27
TUBE1-210ENST00000604967 NFE4Q86UQ8 179 aa7.09□□□□□ -1.27
TUBE1-210ENST00000604967 OR10G8Q8NGN5 311 aa7.09□□□□□ -1.27
TUBE1-210ENST00000604967 LYPD6BQ8NI32 183 aa7.09□□□□□ -1.27
TUBE1-210ENST00000604967 ERVFC1-1P60608 527 aa7.08□□□□□ -1.28
TUBE1-210ENST00000604967 NTM-AS1Q6ZSK4 140 aa7.08□□□□□ -1.28
TUBE1-210ENST00000604967 NIT1Q86X76 327 aa7.08□□□□□ -1.28
TUBE1-210ENST00000604967 MED9Q9NWA0 146 aa7.08□□□□□ -1.28
TUBE1-210ENST00000604967 VAX2Q9UIW0 290 aa7.08□□□□□ -1.28
TUBE1-210ENST00000604967 PDE6DO43924 150 aa7.07□□□□□ -1.28
TUBE1-210ENST00000604967 GNG4P50150 75 aa7.07□□□□□ -1.28
TUBE1-210ENST00000604967 RAB4BP61018 213 aa7.07□□□□□ -1.28
TUBE1-210ENST00000604967 HAMPP81172 84 aa7.07□□□□□ -1.28
TUBE1-210ENST00000604967 C10orf126Q8N4M7 172 aa7.07□□□□□ -1.28
TUBE1-210ENST00000604967 NUDT10Q8NFP7 164 aa7.07□□□□□ -1.28
TUBE1-210ENST00000604967 OR2D3Q8NGH3 330 aa7.07□□□□□ -1.28
TUBE1-210ENST00000604967 OCC1Q8TAD7 63 aa7.07□□□□□ -1.28
TUBE1-210ENST00000604967 NUDT11Q96G61 164 aa7.07□□□□□ -1.28
TUBE1-210ENST00000604967 RNASE7Q9H1E1 156 aaKnown RBP7.07□□□□□ -1.28
TUBE1-210ENST00000604967 TRBV7-3A0A075B6L6 115 aa7.06□□□□□ -1.28
TUBE1-210ENST00000604967 TRBV10-1A0A0K0K1A3 114 aa7.06□□□□□ -1.28
TUBE1-210ENST00000604967 M0QY20 66 aa7.06□□□□□ -1.28
TUBE1-210ENST00000604967 ZNF56Q15929 161 aa7.06□□□□□ -1.28
TUBE1-210ENST00000604967 GTSF1Q8WW33 167 aa7.06□□□□□ -1.28
TUBE1-210ENST00000604967 LECT2O14960 151 aa7.05□□□□□ -1.28
TUBE1-210ENST00000604967 FOXA3P55318 350 aaPredicted RBP7.05□□□□□ -1.28
TUBE1-210ENST00000604967 LAGE3Q14657 143 aa7.05□□□□□ -1.28
TUBE1-210ENST00000604967 SPANXN1Q5VSR9 72 aa7.05□□□□□ -1.28
TUBE1-210ENST00000604967 LYZL1Q6UWQ5 148 aa7.05□□□□□ -1.28
TUBE1-210ENST00000604967 Q8N1X5 172 aa7.05□□□□□ -1.28
TUBE1-210ENST00000604967 FER1L6-AS1Q8NA97 138 aa7.05□□□□□ -1.28
TUBE1-210ENST00000604967 TPPP3Q9BW30 176 aa7.05□□□□□ -1.28
TUBE1-210ENST00000604967 PGPEP1Q9NXJ5 209 aa7.05□□□□□ -1.28
TUBE1-210ENST00000604967 FAM30AQ9NZY2 134 aa7.05□□□□□ -1.28
TUBE1-210ENST00000604967 A0A087WWC5 75 aa7.04□□□□□ -1.28
TUBE1-210ENST00000604967 CTRLP40313 264 aa7.04□□□□□ -1.28
TUBE1-210ENST00000604967 SUMO4Q6EEV6 95 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms