RNA–Protein interactions for RNA: ENST00000604164.5

CCDC12-209, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 399 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-209ENST00000604164 LINC01556Q5JQF7 62 aa7.87□□□□□ -1.15
CCDC12-209ENST00000604164 ALKAL2Q6UX46 152 aa7.87□□□□□ -1.15
CCDC12-209ENST00000604164 WFDC10BQ8IUB3 73 aa7.87□□□□□ -1.15
CCDC12-209ENST00000604164 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.87□□□□□ -1.15
CCDC12-209ENST00000604164 SSBP4Q9BWG4 385 aaPredicted RBP7.87□□□□□ -1.15
CCDC12-209ENST00000604164 SAMD10Q9BYL1 202 aa7.87□□□□□ -1.15
CCDC12-209ENST00000604164 JPT2Q9H910 190 aa7.87□□□□□ -1.15
CCDC12-209ENST00000604164 MSRB1Q9NZV6 116 aa7.87□□□□□ -1.15
CCDC12-209ENST00000604164 A0A087WWL8 130 aa7.86□□□□□ -1.15
CCDC12-209ENST00000604164 GAGE12JA6NER3 117 aa7.86□□□□□ -1.15
CCDC12-209ENST00000604164 SMIM17P0DL12 118 aa7.86□□□□□ -1.15
CCDC12-209ENST00000604164 RAB4BP61018 213 aa7.86□□□□□ -1.15
CCDC12-209ENST00000604164 RPL36AP83881 106 aaKnown RBP7.86□□□□□ -1.15
CCDC12-209ENST00000604164 RPL19P84098 196 aaKnown RBP7.86□□□□□ -1.15
CCDC12-209ENST00000604164 GAGE1Q13065 139 aa7.86□□□□□ -1.15
CCDC12-209ENST00000604164 GAGE4Q13068 117 aa7.86□□□□□ -1.15
CCDC12-209ENST00000604164 GAGE5Q13069 117 aa7.86□□□□□ -1.15
CCDC12-209ENST00000604164 GAGE13Q4V321 117 aa7.86□□□□□ -1.15
CCDC12-209ENST00000604164 Q6ZSN1 163 aa7.86□□□□□ -1.15
CCDC12-209ENST00000604164 ZNF575Q86XF7 245 aa7.86□□□□□ -1.15
CCDC12-209ENST00000604164 OR2D3Q8NGH3 330 aa7.86□□□□□ -1.15
CCDC12-209ENST00000604164 RPL36ALQ969Q0 106 aaKnown RBP7.86□□□□□ -1.15
CCDC12-209ENST00000604164 FRAS1Q86XX4 4008 aa7.86□□□□□ -1.15
CCDC12-209ENST00000604164 RAB19A4D1S5 217 aa7.85□□□□□ -1.15
CCDC12-209ENST00000604164 F2Z2F3 143 aa7.85□□□□□ -1.15
CCDC12-209ENST00000604164 TMEM250H0YL14 139 aa7.85□□□□□ -1.15
CCDC12-209ENST00000604164 ERVFC1-1P60608 527 aa7.85□□□□□ -1.15
CCDC12-209ENST00000604164 CACNG7P62955 275 aa7.85□□□□□ -1.15
CCDC12-209ENST00000604164 C14orf178Q8N769 122 aaPredicted RBP7.85□□□□□ -1.15
CCDC12-209ENST00000604164 FER1L6-AS1Q8NA97 138 aa7.85□□□□□ -1.15
CCDC12-209ENST00000604164 OR10AG1Q8NH19 301 aa7.85□□□□□ -1.15
CCDC12-209ENST00000604164 AP1S3Q96PC3 154 aa7.85□□□□□ -1.15
CCDC12-209ENST00000604164 C19orf71A6NCJ1 209 aa7.84□□□□□ -1.15
CCDC12-209ENST00000604164 RBFOX3A6NFN3 312 aa7.84□□□□□ -1.15
CCDC12-209ENST00000604164 C16orf90A8MZG2 172 aa7.84□□□□□ -1.15
CCDC12-209ENST00000604164 IGLV2-8P01709 118 aa7.84□□□□□ -1.15
CCDC12-209ENST00000604164 LINC00694P0DN24 101 aa7.84□□□□□ -1.15
CCDC12-209ENST00000604164 ZNF56Q15929 161 aa7.84□□□□□ -1.15
CCDC12-209ENST00000604164 LYPD6BQ8NI32 183 aa7.84□□□□□ -1.15
CCDC12-209ENST00000604164 DNAH10Q8IVF4 4471 aa7.84□□□□□ -1.16
CCDC12-209ENST00000604164 TRBV7-3A0A075B6L6 115 aa7.83□□□□□ -1.16
CCDC12-209ENST00000604164 F5H697 171 aa7.83□□□□□ -1.16
CCDC12-209ENST00000604164 NDUFS6O75380 124 aaKnown RBP7.83□□□□□ -1.16
CCDC12-209ENST00000604164 TOR2AQ5JU69 321 aa7.83□□□□□ -1.16
CCDC12-209ENST00000604164 Q6ZRN7 208 aaPredicted RBP7.83□□□□□ -1.16
CCDC12-209ENST00000604164 TPPP3Q9BW30 176 aa7.83□□□□□ -1.16
CCDC12-209ENST00000604164 URGCP-MRPS24S4R325 110 aa7.83□□□□□ -1.16
CCDC12-209ENST00000604164 TRBV20OR9-2A0A075B6H5 130 aa7.82□□□□□ -1.16
CCDC12-209ENST00000604164 IBA57-AS1B1ANH7 110 aa7.82□□□□□ -1.16
CCDC12-209ENST00000604164 NKX2-5P52952 324 aaPredicted RBP7.82□□□□□ -1.16
CCDC12-209ENST00000604164 LAGE3Q14657 143 aa7.82□□□□□ -1.16
CCDC12-209ENST00000604164 KCNIP4Q6PIL6 250 aa7.82□□□□□ -1.16
CCDC12-209ENST00000604164 SPATA12Q7Z6I5 190 aa7.82□□□□□ -1.16
CCDC12-209ENST00000604164 OR10G8Q8NGN5 311 aa7.82□□□□□ -1.16
CCDC12-209ENST00000604164 EIF5A2Q9GZV4 153 aaKnown RBP7.82□□□□□ -1.16
CCDC12-209ENST00000604164 PGPEP1Q9NXJ5 209 aa7.82□□□□□ -1.16
CCDC12-209ENST00000604164 A0A1B0GVG6 124 aa7.81□□□□□ -1.16
CCDC12-209ENST00000604164 H7C1H1 209 aa7.81□□□□□ -1.16
CCDC12-209ENST00000604164 PSCAO43653 123 aa7.81□□□□□ -1.16
CCDC12-209ENST00000604164 TRGC1P0CF51 173 aa7.81□□□□□ -1.16
CCDC12-209ENST00000604164 IGLC6P0CF74 106 aa7.81□□□□□ -1.16
CCDC12-209ENST00000604164 TMEM97Q5BJF2 176 aa7.81□□□□□ -1.16
CCDC12-209ENST00000604164 CDPF1Q6NVV7 123 aa7.81□□□□□ -1.16
CCDC12-209ENST00000604164 WDR73Q6P4I2 378 aa7.81□□□□□ -1.16
CCDC12-209ENST00000604164 RPP21Q9H633 154 aaKnown RBP7.81□□□□□ -1.16
CCDC12-209ENST00000604164 HECTD4Q9Y4D8 3996 aa7.8□□□□□ -1.16
CCDC12-209ENST00000604164 TRAV8-3A0A0A6YYJ7 113 aa7.8□□□□□ -1.16
CCDC12-209ENST00000604164 MUC21A0A0G2JKD1 596 aa7.8□□□□□ -1.16
CCDC12-209ENST00000604164 MUC21A0A140T8X8 626 aa7.8□□□□□ -1.16
CCDC12-209ENST00000604164 IGHV3-30P01768 117 aa7.8□□□□□ -1.16
CCDC12-209ENST00000604164 IGHV3-33P01772 117 aa7.8□□□□□ -1.16
CCDC12-209ENST00000604164 IGHV3-30-3P0DP02 117 aa7.8□□□□□ -1.16
CCDC12-209ENST00000604164 IGHV3-30-5P0DP03 117 aa7.8□□□□□ -1.16
CCDC12-209ENST00000604164 UBE2D3P61077 147 aa7.8□□□□□ -1.16
CCDC12-209ENST00000604164 SSTP61278 116 aa7.8□□□□□ -1.16
CCDC12-209ENST00000604164 PKIAP61925 76 aa7.8□□□□□ -1.16
CCDC12-209ENST00000604164 UBE2D2P62837 147 aa7.8□□□□□ -1.16
CCDC12-209ENST00000604164 ELOBQ15370 118 aa7.8□□□□□ -1.16
CCDC12-209ENST00000604164 NUDT10Q8NFP7 164 aa7.8□□□□□ -1.16
CCDC12-209ENST00000604164 OCC1Q8TAD7 63 aa7.8□□□□□ -1.16
CCDC12-209ENST00000604164 NUDT11Q96G61 164 aa7.8□□□□□ -1.16
CCDC12-209ENST00000604164 CHCHD7Q9BUK0 85 aa7.8□□□□□ -1.16
CCDC12-209ENST00000604164 TM2D2Q9BX73 214 aa7.8□□□□□ -1.16
CCDC12-209ENST00000604164 GZMBP10144 247 aa7.79□□□□□ -1.16
CCDC12-209ENST00000604164 LYZL1Q6UWQ5 148 aa7.79□□□□□ -1.16
CCDC12-209ENST00000604164 DAZ4Q86SG3 579 aaKnown RBP7.79□□□□□ -1.16
CCDC12-209ENST00000604164 FAM210AQ96ND0 272 aa7.79□□□□□ -1.16
CCDC12-209ENST00000604164 DAZ3Q9NR90 486 aaKnown RBP7.79□□□□□ -1.16
CCDC12-209ENST00000604164 TNFRSF18Q9Y5U5 241 aa7.79□□□□□ -1.16
CCDC12-209ENST00000604164 COX11Q9Y6N1 276 aa7.79□□□□□ -1.16
CCDC12-209ENST00000604164 A0A087WX48 190 aa7.78□□□□□ -1.16
CCDC12-209ENST00000604164 MGPP08493 103 aa7.78□□□□□ -1.16
CCDC12-209ENST00000604164 CTRLP40313 264 aa7.78□□□□□ -1.16
CCDC12-209ENST00000604164 CEBPGP53567 150 aa7.78□□□□□ -1.16
CCDC12-209ENST00000604164 SMIM15Q7Z3B0 74 aa7.78□□□□□ -1.16
CCDC12-209ENST00000604164 NEXN-AS1Q8NBZ9 246 aa7.78□□□□□ -1.16
CCDC12-209ENST00000604164 RMI2Q96E14 147 aa7.78□□□□□ -1.16
CCDC12-209ENST00000604164 DNAJC30Q96LL9 226 aa7.78□□□□□ -1.16
CCDC12-209ENST00000604164 Q9UF83 564 aa7.78□□□□□ -1.16
CCDC12-209ENST00000604164 KIF25-AS1Q9Y6Z4 181 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms