RNA–Protein interactions for RNA: ENST00000603837.1

LINC01109-201, Transcript of long intergenic non-protein coding RNA 1109, humanhuman

BASIC

Gene LINC01109, Length 3,081 nt, Biotype lincRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01109-201ENST00000603837 Q1RN00 199 aa3.57□□□□□ -1.84
LINC01109-201ENST00000603837 DEFB121Q5J5C9 76 aa3.57□□□□□ -1.84
LINC01109-201ENST00000603837 S100A7L2Q5SY68 101 aa3.57□□□□□ -1.84
LINC01109-201ENST00000603837 MORN5Q5VZ52 161 aa3.57□□□□□ -1.84
LINC01109-201ENST00000603837 C5orf38Q86SI9 138 aa3.57□□□□□ -1.84
LINC01109-201ENST00000603837 MOB4Q9Y3A3 225 aa3.57□□□□□ -1.84
LINC01109-201ENST00000603837 ZNF706Q9Y5V0 76 aaPredicted RBP3.57□□□□□ -1.84
LINC01109-201ENST00000603837 SERP1Q9Y6X1 66 aa3.57□□□□□ -1.84
LINC01109-201ENST00000603837 TLN1Q9Y490 2541 aaKnown RBP3.57□□□□□ -1.84
LINC01109-201ENST00000603837 PCNX1Q96RV3 2341 aa3.57□□□□□ -1.84
LINC01109-201ENST00000603837 EML6Q6ZMW3 1958 aa3.56□□□□□ -1.84
LINC01109-201ENST00000603837 ESPL1Q14674 2120 aa3.56□□□□□ -1.84
LINC01109-201ENST00000603837 NDUFC2-KCTD14E9PQ53 114 aa3.56□□□□□ -1.84
LINC01109-201ENST00000603837 K7EQD1 137 aa3.56□□□□□ -1.84
LINC01109-201ENST00000603837 CKS2P33552 79 aa3.56□□□□□ -1.84
LINC01109-201ENST00000603837 HIST1H4AP62805 103 aaKnown RBP3.56□□□□□ -1.84
LINC01109-201ENST00000603837 MRPL51Q4U2R6 128 aaKnown RBP3.56□□□□□ -1.84
LINC01109-201ENST00000603837 FAM104BQ5XKR9 115 aa3.56□□□□□ -1.84
LINC01109-201ENST00000603837 COL12A1Q99715 3063 aa3.56□□□□□ -1.84
LINC01109-201ENST00000603837 A0A087WZ39 114 aa3.56□□□□□ -1.84
LINC01109-201ENST00000603837 M0R381 172 aa3.56□□□□□ -1.84
LINC01109-201ENST00000603837 CLPSP04118 112 aa3.56□□□□□ -1.84
LINC01109-201ENST00000603837 Q6ZVQ6 151 aa3.56□□□□□ -1.84
LINC01109-201ENST00000603837 C6orf223Q8N319 242 aa3.56□□□□□ -1.84
LINC01109-201ENST00000603837 CD177Q8N6Q3 437 aa3.56□□□□□ -1.84
LINC01109-201ENST00000603837 FAM167A-AS1Q96KT0 104 aa3.56□□□□□ -1.84
LINC01109-201ENST00000603837 SRXN1Q9BYN0 137 aa3.56□□□□□ -1.84
LINC01109-201ENST00000603837 KRTAP9-9Q9BYP9 154 aa3.56□□□□□ -1.84
LINC01109-201ENST00000603837 KRTAP9-4Q9BYQ2 154 aa3.56□□□□□ -1.84
LINC01109-201ENST00000603837 ZFYVE26Q68DK2 2539 aa3.56□□□□□ -1.84
LINC01109-201ENST00000603837 H0YGG7 62 aa3.55□□□□□ -1.84
LINC01109-201ENST00000603837 NDUFS5O43920 106 aa3.55□□□□□ -1.84
LINC01109-201ENST00000603837 IGHV3-33P01772 117 aa3.55□□□□□ -1.84
LINC01109-201ENST00000603837 CIRBPQ14011 172 aaKnown RBP3.55□□□□□ -1.84
LINC01109-201ENST00000603837 PIK3CD-AS1Q5SR53 167 aa3.55□□□□□ -1.84
LINC01109-201ENST00000603837 SMCR5Q8TEV8 140 aa3.55□□□□□ -1.84
LINC01109-201ENST00000603837 IGHV5-51A0A0C4DH38 117 aa3.55□□□□□ -1.84
LINC01109-201ENST00000603837 EPM2AB3EWF7 344 aa3.55□□□□□ -1.84
LINC01109-201ENST00000603837 IGLV3-19P01714 112 aa3.55□□□□□ -1.84
LINC01109-201ENST00000603837 CRYGSP22914 178 aa3.55□□□□□ -1.84
LINC01109-201ENST00000603837 LINC00205P59089 165 aa3.55□□□□□ -1.84
LINC01109-201ENST00000603837 COL6A6A6NMZ7 2263 aa3.55□□□□□ -1.84
LINC01109-201ENST00000603837 A8MUN3 132 aa3.55□□□□□ -1.84
LINC01109-201ENST00000603837 H7C423 109 aa3.55□□□□□ -1.84
LINC01109-201ENST00000603837 SCRG1O75711 98 aa3.55□□□□□ -1.84
LINC01109-201ENST00000603837 GUSBP11Q6P575 273 aa3.55□□□□□ -1.84
LINC01109-201ENST00000603837 TMEM243Q9BU79 118 aa3.55□□□□□ -1.84
LINC01109-201ENST00000603837 INTS1Q8N201 2190 aaKnown RBP3.54□□□□□ -1.84
LINC01109-201ENST00000603837 TRBV7-1A0A0A6YYK4 115 aa3.54□□□□□ -1.84
LINC01109-201ENST00000603837 F8VRH5 84 aa3.54□□□□□ -1.84
LINC01109-201ENST00000603837 COX7A2P2O60397 106 aa3.54□□□□□ -1.84
LINC01109-201ENST00000603837 BRWD1-AS2P59051 145 aa3.54□□□□□ -1.84
LINC01109-201ENST00000603837 CFHR3Q02985 330 aa3.54□□□□□ -1.84
LINC01109-201ENST00000603837 ORMDL2Q53FV1 153 aa3.54□□□□□ -1.84
LINC01109-201ENST00000603837 Q6ZSV7 163 aa3.54□□□□□ -1.84
LINC01109-201ENST00000603837 Q86TA4 180 aa3.54□□□□□ -1.84
LINC01109-201ENST00000603837 SMG1Q96Q15 3661 aaKnown RBP3.54□□□□□ -1.84
LINC01109-201ENST00000603837 ROS1P08922 2347 aa3.54□□□□□ -1.84
LINC01109-201ENST00000603837 ZNF407Q9C0G0 2248 aa3.54□□□□□ -1.84
LINC01109-201ENST00000603837 TET2Q6N021 2002 aaPredicted RBP3.54□□□□□ -1.84
LINC01109-201ENST00000603837 ACACBO00763 2458 aa3.54□□□□□ -1.84
LINC01109-201ENST00000603837 A0A0B4J2C4 111 aa3.54□□□□□ -1.84
LINC01109-201ENST00000603837 A0A1W2PQD3 144 aa3.54□□□□□ -1.84
LINC01109-201ENST00000603837 IGHV3-30P01768 117 aa3.54□□□□□ -1.84
LINC01109-201ENST00000603837 IGHV3-30-5P0DP03 117 aa3.54□□□□□ -1.84
LINC01109-201ENST00000603837 IGFL3Q6UXB1 125 aa3.54□□□□□ -1.84
LINC01109-201ENST00000603837 CLEC19AQ6UXS0 136 aa3.54□□□□□ -1.84
LINC01109-201ENST00000603837 ZNF497Q6ZNH5 498 aa3.54□□□□□ -1.84
LINC01109-201ENST00000603837 PRR15Q8IV56 129 aa3.54□□□□□ -1.84
LINC01109-201ENST00000603837 FAM218AQ96MZ4 157 aa3.54□□□□□ -1.84
LINC01109-201ENST00000603837 TM2D3Q9BRN9 247 aa3.54□□□□□ -1.84
LINC01109-201ENST00000603837 USF3Q68DE3 2245 aa3.53□□□□□ -1.84
LINC01109-201ENST00000603837 TRAV8-3A0A0A6YYJ7 113 aa3.53□□□□□ -1.84
LINC01109-201ENST00000603837 TRGV8A0A0C4DH27 118 aa3.53□□□□□ -1.84
LINC01109-201ENST00000603837 LINC01546A6NGU7 62 aa3.53□□□□□ -1.84
LINC01109-201ENST00000603837 FHL2Q14192 279 aa3.53□□□□□ -1.84
LINC01109-201ENST00000603837 KTN1-AS1Q86SY8 53 aa3.53□□□□□ -1.84
LINC01109-201ENST00000603837 CACNA1AO00555 2505 aa3.53□□□□□ -1.84
LINC01109-201ENST00000603837 A0A0J9YY99 117 aa3.53□□□□□ -1.84
LINC01109-201ENST00000603837 LOC100131303A0A0U1RQF7 123 aa3.53□□□□□ -1.84
LINC01109-201ENST00000603837 IQCF6A8MYZ5 107 aa3.53□□□□□ -1.84
LINC01109-201ENST00000603837 IGHV3-13P01766 116 aa3.53□□□□□ -1.84
LINC01109-201ENST00000603837 EIF4EBP1Q13541 118 aaPredicted RBP3.53□□□□□ -1.84
LINC01109-201ENST00000603837 RHOHQ15669 191 aa3.53□□□□□ -1.84
LINC01109-201ENST00000603837 C10orf113Q5VZT2 155 aa3.53□□□□□ -1.84
LINC01109-201ENST00000603837 REG3GQ6UW15 175 aa3.53□□□□□ -1.84
LINC01109-201ENST00000603837 FP248Q71RG6 208 aaPredicted RBP3.53□□□□□ -1.84
LINC01109-201ENST00000603837 LINC00337Q8N6G1 96 aa3.53□□□□□ -1.84
LINC01109-201ENST00000603837 C11orf72Q8NBR9 251 aa3.53□□□□□ -1.84
LINC01109-201ENST00000603837 ZNF714Q96N38 554 aa3.53□□□□□ -1.84
LINC01109-201ENST00000603837 SPTBN1Q01082 2364 aaKnown RBP3.53□□□□□ -1.84
LINC01109-201ENST00000603837 RELNP78509 3460 aa3.53□□□□□ -1.84
LINC01109-201ENST00000603837 IGKV1OR2-108A0A075B7D4 117 aa3.52□□□□□ -1.85
LINC01109-201ENST00000603837 IGHV1OR21-1A0A087WYE8 117 aa3.52□□□□□ -1.85
LINC01109-201ENST00000603837 TMEM256-PLSCR3K7ERE1 68 aa3.52□□□□□ -1.85
LINC01109-201ENST00000603837 UPK2O00526 184 aa3.52□□□□□ -1.85
LINC01109-201ENST00000603837 ZNF73O43830 326 aaPredicted RBP3.52□□□□□ -1.85
LINC01109-201ENST00000603837 DAD1P61803 113 aa3.52□□□□□ -1.85
LINC01109-201ENST00000603837 LCE4AQ5TA78 99 aa3.52□□□□□ -1.85
LINC01109-201ENST00000603837 LYZL1Q6UWQ5 148 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms