RNA–Protein interactions for RNA: ENST00000601816.3

PNKP-216, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 682 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-216ENST00000601816 C14orf178Q8N769 122 aaPredicted RBP17.53■□□□□ 0.4
PNKP-216ENST00000601816 M0R381 172 aa17.52■□□□□ 0.4
PNKP-216ENST00000601816 IGHV3-30P01768 117 aa17.52■□□□□ 0.4
PNKP-216ENST00000601816 IGHV3-33P01772 117 aa17.52■□□□□ 0.4
PNKP-216ENST00000601816 IGHV3-30-3P0DP02 117 aa17.52■□□□□ 0.4
PNKP-216ENST00000601816 IGHV3-30-5P0DP03 117 aa17.52■□□□□ 0.4
PNKP-216ENST00000601816 ZFP82Q8N141 532 aa17.52■□□□□ 0.4
PNKP-216ENST00000601816 SFRP2Q96HF1 295 aa17.52■□□□□ 0.4
PNKP-216ENST00000601816 PSCAO43653 123 aa17.51■□□□□ 0.39
PNKP-216ENST00000601816 BAGE2Q86Y30 109 aa17.51■□□□□ 0.39
PNKP-216ENST00000601816 A0A087WWL8 130 aa17.5■□□□□ 0.39
PNKP-216ENST00000601816 Q9HAA7 133 aa17.5■□□□□ 0.39
PNKP-216ENST00000601816 Q9UF83 564 aa17.5■□□□□ 0.39
PNKP-216ENST00000601816 MLST8Q9BVC4 326 aa17.49■□□□□ 0.39
PNKP-216ENST00000601816 ABCA13Q86UQ4 5058 aa17.49■□□□□ 0.39
PNKP-216ENST00000601816 MANBALQ9NQG1 85 aa17.48■□□□□ 0.39
PNKP-216ENST00000601816 A0A087WWC5 75 aa17.47■□□□□ 0.39
PNKP-216ENST00000601816 RAB5CP51148 216 aa17.47■□□□□ 0.39
PNKP-216ENST00000601816 RPL19P84098 196 aaKnown RBP17.47■□□□□ 0.39
PNKP-216ENST00000601816 EIF5AL1Q6IS14 154 aaKnown RBP17.47■□□□□ 0.39
PNKP-216ENST00000601816 GNG13Q9P2W3 67 aa17.47■□□□□ 0.39
PNKP-216ENST00000601816 CXCL1P09341 107 aa17.46■□□□□ 0.39
PNKP-216ENST00000601816 Q8N1X5 172 aa17.46■□□□□ 0.39
PNKP-216ENST00000601816 TRAV1-1A0A0B4J248 108 aa17.45■□□□□ 0.38
PNKP-216ENST00000601816 CCL20P78556 96 aa17.45■□□□□ 0.38
PNKP-216ENST00000601816 LAGE3Q14657 143 aa17.45■□□□□ 0.38
PNKP-216ENST00000601816 PRR27Q6MZM9 219 aa17.45■□□□□ 0.38
PNKP-216ENST00000601816 TEX46H3BTG2 121 aa17.44■□□□□ 0.38
PNKP-216ENST00000601816 RPL35P42766 123 aaKnown RBP17.44■□□□□ 0.38
PNKP-216ENST00000601816 TCTE3Q8IZS6 198 aa17.44■□□□□ 0.38
PNKP-216ENST00000601816 Q8N3U1 123 aa17.44■□□□□ 0.38
PNKP-216ENST00000601816 LRCOL1A6NCL2 159 aa17.43■□□□□ 0.38
PNKP-216ENST00000601816 C11orf52Q96A22 123 aa17.43■□□□□ 0.38
PNKP-216ENST00000601816 TRBV10-1A0A0K0K1A3 114 aa17.42■□□□□ 0.38
PNKP-216ENST00000601816 OR10AG1Q8NH19 301 aa17.42■□□□□ 0.38
PNKP-216ENST00000601816 DERL1Q9BUN8 251 aa17.41■□□□□ 0.38
PNKP-216ENST00000601816 SULT1A2P50226 295 aa17.4■□□□□ 0.38
PNKP-216ENST00000601816 KRTAP10-1P60331 282 aa17.4■□□□□ 0.38
PNKP-216ENST00000601816 RPL36AP83881 106 aaKnown RBP17.4■□□□□ 0.38
PNKP-216ENST00000601816 RPL36ALQ969Q0 106 aaKnown RBP17.4■□□□□ 0.38
PNKP-216ENST00000601816 TM2D2Q9BX73 214 aa17.4■□□□□ 0.38
PNKP-216ENST00000601816 SNAI2O43623 268 aa17.39■□□□□ 0.37
PNKP-216ENST00000601816 DAZ4Q86SG3 579 aaKnown RBP17.39■□□□□ 0.37
PNKP-216ENST00000601816 SSBP4Q9BWG4 385 aaPredicted RBP17.39■□□□□ 0.37
PNKP-216ENST00000601816 DAZ3Q9NR90 486 aaKnown RBP17.39■□□□□ 0.37
PNKP-216ENST00000601816 TRAV8-3A0A0A6YYJ7 113 aa17.38■□□□□ 0.37
PNKP-216ENST00000601816 OR5AL1P0C617 328 aa17.38■□□□□ 0.37
PNKP-216ENST00000601816 GCSHP23434 173 aa17.38■□□□□ 0.37
PNKP-216ENST00000601816 ZNF56Q15929 161 aa17.38■□□□□ 0.37
PNKP-216ENST00000601816 CENPWQ5EE01 88 aa17.38■□□□□ 0.37
PNKP-216ENST00000601816 TOR2AQ5JU69 321 aa17.38■□□□□ 0.37
PNKP-216ENST00000601816 SPANXN1Q5VSR9 72 aa17.38■□□□□ 0.37
PNKP-216ENST00000601816 URGCP-MRPS24S4R325 110 aa17.38■□□□□ 0.37
PNKP-216ENST00000601816 TRBV7-3A0A075B6L6 115 aa17.37■□□□□ 0.37
PNKP-216ENST00000601816 IGLV5-52A0A0A0MRZ9 124 aa17.37■□□□□ 0.37
PNKP-216ENST00000601816 RAB4BP61018 213 aa17.37■□□□□ 0.37
PNKP-216ENST00000601816 NTN5Q8WTR8 489 aaPredicted RBP17.37■□□□□ 0.37
PNKP-216ENST00000601816 MUC21A0A0G2JKD1 596 aa17.36■□□□□ 0.37
PNKP-216ENST00000601816 MUC21A0A140T8X8 626 aa17.36■□□□□ 0.37
PNKP-216ENST00000601816 C1QBP02746 253 aa17.36■□□□□ 0.37
PNKP-216ENST00000601816 UBE2D3P61077 147 aa17.36■□□□□ 0.37
PNKP-216ENST00000601816 UBE2D2P62837 147 aa17.36■□□□□ 0.37
PNKP-216ENST00000601816 SLC51BQ86UW2 128 aa17.36■□□□□ 0.37
PNKP-216ENST00000601816 NIT1Q86X76 327 aa17.36■□□□□ 0.37
PNKP-216ENST00000601816 Q8N814 137 aa17.36■□□□□ 0.37
PNKP-216ENST00000601816 IFNA1P01562 189 aa17.35■□□□□ 0.37
PNKP-216ENST00000601816 XGP55808 180 aa17.34■□□□□ 0.37
PNKP-216ENST00000601816 MEF2BQ02080 365 aaPredicted RBP17.34■□□□□ 0.37
PNKP-216ENST00000601816 OR10G8Q8NGN5 311 aa17.34■□□□□ 0.37
PNKP-216ENST00000601816 PDE6DO43924 150 aa17.33■□□□□ 0.36
PNKP-216ENST00000601816 SSTP61278 116 aa17.33■□□□□ 0.36
PNKP-216ENST00000601816 DAZAP1Q96EP5 407 aaKnown RBP17.33■□□□□ 0.36
PNKP-216ENST00000601816 RAB19A4D1S5 217 aa17.32■□□□□ 0.36
PNKP-216ENST00000601816 GNG4P50150 75 aa17.32■□□□□ 0.36
PNKP-216ENST00000601816 Q6ZNX1 250 aa17.32■□□□□ 0.36
PNKP-216ENST00000601816 NEXN-AS1Q8NBZ9 246 aa17.32■□□□□ 0.36
PNKP-216ENST00000601816 SMIM12Q96EX1 92 aa17.32■□□□□ 0.36
PNKP-216ENST00000601816 F5H697 171 aa17.31■□□□□ 0.36
PNKP-216ENST00000601816 IGLV2-8P01709 118 aa17.31■□□□□ 0.36
PNKP-216ENST00000601816 BCL2P10415 239 aa17.31■□□□□ 0.36
PNKP-216ENST00000601816 OR2D3Q8NGH3 330 aa17.31■□□□□ 0.36
PNKP-216ENST00000601816 AP1S3Q96PC3 154 aa17.31■□□□□ 0.36
PNKP-216ENST00000601816 A0A087WX48 190 aa17.3■□□□□ 0.36
PNKP-216ENST00000601816 SMIM17P0DL12 118 aa17.3■□□□□ 0.36
PNKP-216ENST00000601816 RPS20P60866 119 aaKnown RBP17.3■□□□□ 0.36
PNKP-216ENST00000601816 KCNIP4Q6PIL6 250 aa17.3■□□□□ 0.36
PNKP-216ENST00000601816 CHCHD7Q9BUK0 85 aa17.3■□□□□ 0.36
PNKP-216ENST00000601816 MED9Q9NWA0 146 aa17.3■□□□□ 0.36
PNKP-216ENST00000601816 GZMBP10144 247 aa17.29■□□□□ 0.36
PNKP-216ENST00000601816 RMI2Q96E14 147 aa17.29■□□□□ 0.36
PNKP-216ENST00000601816 TPPP3Q9BW30 176 aa17.29■□□□□ 0.36
PNKP-216ENST00000601816 VAX2Q9UIW0 290 aa17.29■□□□□ 0.36
PNKP-216ENST00000601816 KLK12Q9UKR0 248 aa17.29■□□□□ 0.36
PNKP-216ENST00000601816 COX11Q9Y6N1 276 aa17.29■□□□□ 0.36
PNKP-216ENST00000601816 C19orf71A6NCJ1 209 aa17.28■□□□□ 0.36
PNKP-216ENST00000601816 EPM2AB3EWF7 344 aa17.28■□□□□ 0.36
PNKP-216ENST00000601816 WFDC2Q14508 124 aa17.28■□□□□ 0.36
PNKP-216ENST00000601816 ELOBQ15370 118 aa17.28■□□□□ 0.36
PNKP-216ENST00000601816 SREK1IP1Q8N9Q2 155 aaPredicted RBP17.28■□□□□ 0.36
PNKP-216ENST00000601816 FER1L6-AS1Q8NA97 138 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms