RNA–Protein interactions for RNA: ENST00000601592.5

USE1-209, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 3

Gene USE1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-209ENST00000601592 GAGE12JA6NER3 117 aa8.79□□□□□ -1
USE1-209ENST00000601592 K7EN84 100 aa8.79□□□□□ -1
USE1-209ENST00000601592 RTL8CO15255 209 aa8.79□□□□□ -1
USE1-209ENST00000601592 SNAI2O43623 268 aa8.79□□□□□ -1
USE1-209ENST00000601592 GAGE1Q13065 139 aa8.79□□□□□ -1
USE1-209ENST00000601592 GAGE4Q13068 117 aa8.79□□□□□ -1
USE1-209ENST00000601592 GAGE5Q13069 117 aa8.79□□□□□ -1
USE1-209ENST00000601592 ZNF56Q15929 161 aa8.79□□□□□ -1
USE1-209ENST00000601592 GAGE13Q4V321 117 aa8.79□□□□□ -1
USE1-209ENST00000601592 LINC00336Q6ZUF6 198 aa8.79□□□□□ -1
USE1-209ENST00000601592 SMIM7Q9BQ49 75 aa8.79□□□□□ -1
USE1-209ENST00000601592 RNASE7Q9H1E1 156 aaKnown RBP8.79□□□□□ -1
USE1-209ENST00000601592 FRAS1Q86XX4 4008 aa8.78□□□□□ -1
USE1-209ENST00000601592 PRSS29PA6NIE9 313 aa8.78□□□□□ -1
USE1-209ENST00000601592 UFSP1Q6NVU6 142 aa8.78□□□□□ -1
USE1-209ENST00000601592 WFDC10BQ8IUB3 73 aa8.78□□□□□ -1
USE1-209ENST00000601592 C6orf223Q8N319 242 aa8.78□□□□□ -1
USE1-209ENST00000601592 NUDT10Q8NFP7 164 aa8.78□□□□□ -1
USE1-209ENST00000601592 ATP6V0E2Q8NHE4 81 aa8.78□□□□□ -1
USE1-209ENST00000601592 NUDT11Q96G61 164 aa8.78□□□□□ -1
USE1-209ENST00000601592 SSBP4Q9BWG4 385 aaPredicted RBP8.78□□□□□ -1
USE1-209ENST00000601592 RPP21Q9H633 154 aaKnown RBP8.78□□□□□ -1
USE1-209ENST00000601592 ZNF727A8MUV8 499 aa8.77□□□□□ -1.01
USE1-209ENST00000601592 CRYGDP07320 174 aa8.77□□□□□ -1.01
USE1-209ENST00000601592 SRP19P09132 144 aaKnown RBP8.77□□□□□ -1.01
USE1-209ENST00000601592 SMIM17P0DL12 118 aa8.77□□□□□ -1.01
USE1-209ENST00000601592 OR10J3Q5JRS4 329 aa8.77□□□□□ -1.01
USE1-209ENST00000601592 AP1S3Q96PC3 154 aa8.77□□□□□ -1.01
USE1-209ENST00000601592 KRTAP1-5Q9BYS1 174 aa8.77□□□□□ -1.01
USE1-209ENST00000601592 F5H697 171 aa8.76□□□□□ -1.01
USE1-209ENST00000601592 IGLC6P0CF74 106 aa8.76□□□□□ -1.01
USE1-209ENST00000601592 Q9UF83 564 aa8.76□□□□□ -1.01
USE1-209ENST00000601592 LY96Q9Y6Y9 160 aa8.76□□□□□ -1.01
USE1-209ENST00000601592 DNAH2Q9P225 4427 aa8.75□□□□□ -1.01
USE1-209ENST00000601592 TRAV8-6A0A0B4J262 113 aa8.75□□□□□ -1.01
USE1-209ENST00000601592 A0A1W2PPQ1 181 aa8.75□□□□□ -1.01
USE1-209ENST00000601592 F2Z2F3 143 aa8.75□□□□□ -1.01
USE1-209ENST00000601592 GATCO43716 136 aaKnown RBP8.75□□□□□ -1.01
USE1-209ENST00000601592 MGPP08493 103 aa8.75□□□□□ -1.01
USE1-209ENST00000601592 ERVFC1-1P60608 527 aa8.75□□□□□ -1.01
USE1-209ENST00000601592 CACNG7P62955 275 aa8.75□□□□□ -1.01
USE1-209ENST00000601592 LYZL1Q6UWQ5 148 aa8.75□□□□□ -1.01
USE1-209ENST00000601592 GTSF1LQ9H1H1 148 aa8.75□□□□□ -1.01
USE1-209ENST00000601592 EPPK1P58107 5090 aaKnown RBP8.74□□□□□ -1.01
USE1-209ENST00000601592 NDUFS6O75380 124 aaKnown RBP8.74□□□□□ -1.01
USE1-209ENST00000601592 EVI2AP22794 236 aa8.74□□□□□ -1.01
USE1-209ENST00000601592 TIRAPP58753 221 aa8.74□□□□□ -1.01
USE1-209ENST00000601592 RAB4BP61018 213 aa8.74□□□□□ -1.01
USE1-209ENST00000601592 PEA15Q15121 130 aa8.74□□□□□ -1.01
USE1-209ENST00000601592 MSRB1Q9NZV6 116 aa8.74□□□□□ -1.01
USE1-209ENST00000601592 TRAV9-2A0A087WT02 112 aa8.73□□□□□ -1.01
USE1-209ENST00000601592 IGHV3-38A0A0C4DH36 116 aa8.73□□□□□ -1.01
USE1-209ENST00000601592 LINC00315P59091 139 aa8.73□□□□□ -1.01
USE1-209ENST00000601592 RPL36AP83881 106 aaKnown RBP8.73□□□□□ -1.01
USE1-209ENST00000601592 SRSF3P84103 164 aaKnown RBP8.73□□□□□ -1.01
USE1-209ENST00000601592 LELP1Q5T871 98 aa8.73□□□□□ -1.01
USE1-209ENST00000601592 LINC01551Q86U37 167 aa8.73□□□□□ -1.01
USE1-209ENST00000601592 RPL36ALQ969Q0 106 aaKnown RBP8.73□□□□□ -1.01
USE1-209ENST00000601592 TRBV10-1A0A0K0K1A3 114 aa8.72□□□□□ -1.01
USE1-209ENST00000601592 A8MWL6 223 aa8.72□□□□□ -1.01
USE1-209ENST00000601592 C9JQL5 133 aa8.72□□□□□ -1.01
USE1-209ENST00000601592 TRGC1P0CF51 173 aa8.72□□□□□ -1.01
USE1-209ENST00000601592 LINC00694P0DN24 101 aa8.72□□□□□ -1.01
USE1-209ENST00000601592 NTF3P20783 257 aa8.72□□□□□ -1.01
USE1-209ENST00000601592 CTRLP40313 264 aa8.72□□□□□ -1.01
USE1-209ENST00000601592 RAB14P61106 215 aa8.72□□□□□ -1.01
USE1-209ENST00000601592 TWIST1Q15672 202 aa8.72□□□□□ -1.01
USE1-209ENST00000601592 FAM231DQ6ZW35 169 aa8.72□□□□□ -1.01
USE1-209ENST00000601592 TRBV7-3A0A075B6L6 115 aa8.71□□□□□ -1.02
USE1-209ENST00000601592 IGHV3-30P01768 117 aa8.71□□□□□ -1.02
USE1-209ENST00000601592 IGHV3-33P01772 117 aa8.71□□□□□ -1.02
USE1-209ENST00000601592 DNAH10OSP0CZ25 163 aa8.71□□□□□ -1.02
USE1-209ENST00000601592 IGHV3-30-3P0DP02 117 aa8.71□□□□□ -1.02
USE1-209ENST00000601592 IGHV3-30-5P0DP03 117 aa8.71□□□□□ -1.02
USE1-209ENST00000601592 TNP2Q05952 138 aa8.71□□□□□ -1.02
USE1-209ENST00000601592 ADIRFQ15847 76 aa8.71□□□□□ -1.02
USE1-209ENST00000601592 TMEM241Q24JQ0 296 aa8.71□□□□□ -1.02
USE1-209ENST00000601592 FAM74A3Q4VXF1 159 aa8.71□□□□□ -1.02
USE1-209ENST00000601592 C15orf54Q8N8G6 183 aa8.7□□□□□ -1.02
USE1-209ENST00000601592 NEXN-AS1Q8NBZ9 246 aa8.7□□□□□ -1.02
USE1-209ENST00000601592 GTSF1Q8WW33 167 aa8.7□□□□□ -1.02
USE1-209ENST00000601592 BORCS7Q96B45 105 aa8.7□□□□□ -1.02
USE1-209ENST00000601592 PGLYRP4Q96LB8 373 aa8.7□□□□□ -1.02
USE1-209ENST00000601592 DPH3P1Q9H4G8 78 aa8.7□□□□□ -1.02
USE1-209ENST00000601592 TNFRSF18Q9Y5U5 241 aa8.7□□□□□ -1.02
USE1-209ENST00000601592 KIF25-AS1Q9Y6Z4 181 aa8.7□□□□□ -1.02
USE1-209ENST00000601592 DNAH17Q9UFH2 4485 aa8.7□□□□□ -1.02
USE1-209ENST00000601592 A0A087WWC5 75 aa8.69□□□□□ -1.02
USE1-209ENST00000601592 UBE2D3P61077 147 aa8.69□□□□□ -1.02
USE1-209ENST00000601592 RPL23P62829 140 aaKnown RBP8.69□□□□□ -1.02
USE1-209ENST00000601592 UBE2D2P62837 147 aa8.69□□□□□ -1.02
USE1-209ENST00000601592 LINC01556Q5JQF7 62 aa8.69□□□□□ -1.02
USE1-209ENST00000601592 SUMO4Q6EEV6 95 aa8.69□□□□□ -1.02
USE1-209ENST00000601592 SMIM15Q7Z3B0 74 aa8.69□□□□□ -1.02
USE1-209ENST00000601592 C10orf126Q8N4M7 172 aa8.69□□□□□ -1.02
USE1-209ENST00000601592 SMDT1Q9H4I9 107 aa8.69□□□□□ -1.02
USE1-209ENST00000601592 OSTCQ9NRP0 149 aa8.69□□□□□ -1.02
USE1-209ENST00000601592 NAT8Q9UHE5 227 aa8.69□□□□□ -1.02
USE1-209ENST00000601592 FAT2Q9NYQ8 4349 aa8.69□□□□□ -1.02
USE1-209ENST00000601592 A0A1B0GVY2 172 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms