RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 IGLC6P0CF74 106 aa10.73□□□□□ -0.69
RPS28-203ENST00000600659 TIRAPP58753 221 aa10.73□□□□□ -0.69
RPS28-203ENST00000600659 SYT8Q8NBV8 401 aa10.73□□□□□ -0.69
RPS28-203ENST00000600659 A0A087WWL8 130 aa10.72□□□□□ -0.69
RPS28-203ENST00000600659 TMEM250H0YL14 139 aa10.72□□□□□ -0.69
RPS28-203ENST00000600659 GZMBP10144 247 aa10.72□□□□□ -0.69
RPS28-203ENST00000600659 TTC32Q5I0X7 151 aa10.72□□□□□ -0.69
RPS28-203ENST00000600659 PRADC1Q9BSG0 188 aa10.72□□□□□ -0.69
RPS28-203ENST00000600659 MUC21A0A0G2JKD1 596 aa10.71□□□□□ -0.69
RPS28-203ENST00000600659 MUC21A0A140T8X8 626 aa10.71□□□□□ -0.69
RPS28-203ENST00000600659 RHODO00212 210 aa10.71□□□□□ -0.69
RPS28-203ENST00000600659 TNP2Q05952 138 aa10.71□□□□□ -0.69
RPS28-203ENST00000600659 TOR2AQ5JU69 321 aa10.71□□□□□ -0.69
RPS28-203ENST00000600659 FAM210AQ96ND0 272 aa10.71□□□□□ -0.69
RPS28-203ENST00000600659 FAM74A4Q5TZK3 123 aa10.7□□□□□ -0.7
RPS28-203ENST00000600659 Q6ZRN7 208 aaPredicted RBP10.7□□□□□ -0.7
RPS28-203ENST00000600659 SH2D6Q7Z4S9 175 aa10.7□□□□□ -0.7
RPS28-203ENST00000600659 OR2D3Q8NGH3 330 aa10.7□□□□□ -0.7
RPS28-203ENST00000600659 OCC1Q8TAD7 63 aa10.7□□□□□ -0.7
RPS28-203ENST00000600659 KIF25-AS1Q9Y6Z4 181 aa10.7□□□□□ -0.7
RPS28-203ENST00000600659 NDUFS6O75380 124 aaKnown RBP10.69□□□□□ -0.7
RPS28-203ENST00000600659 DNAH10OSP0CZ25 163 aa10.69□□□□□ -0.7
RPS28-203ENST00000600659 LINC00315P59091 139 aa10.69□□□□□ -0.7
RPS28-203ENST00000600659 SOHLH1Q5JUK2 328 aa10.69□□□□□ -0.7
RPS28-203ENST00000600659 TEX261Q6UWH6 196 aa10.69□□□□□ -0.7
RPS28-203ENST00000600659 NUDT10Q8NFP7 164 aa10.69□□□□□ -0.7
RPS28-203ENST00000600659 NUDT11Q96G61 164 aa10.69□□□□□ -0.7
RPS28-203ENST00000600659 HERC2O95714 4834 aa10.69□□□□□ -0.7
RPS28-203ENST00000600659 GAGE12JA6NER3 117 aa10.68□□□□□ -0.7
RPS28-203ENST00000600659 GAGE1Q13065 139 aa10.68□□□□□ -0.7
RPS28-203ENST00000600659 GAGE4Q13068 117 aa10.68□□□□□ -0.7
RPS28-203ENST00000600659 GAGE5Q13069 117 aa10.68□□□□□ -0.7
RPS28-203ENST00000600659 GAGE13Q4V321 117 aa10.68□□□□□ -0.7
RPS28-203ENST00000600659 P01737 135 aa10.67□□□□□ -0.7
RPS28-203ENST00000600659 BTF3P20290 206 aaKnown RBP10.67□□□□□ -0.7
RPS28-203ENST00000600659 ATP6V0E2Q8NHE4 81 aa10.67□□□□□ -0.7
RPS28-203ENST00000600659 DAZAP1Q96EP5 407 aaKnown RBP10.67□□□□□ -0.7
RPS28-203ENST00000600659 RNASE7Q9H1E1 156 aaKnown RBP10.67□□□□□ -0.7
RPS28-203ENST00000600659 GTSF1LQ9H1H1 148 aa10.67□□□□□ -0.7
RPS28-203ENST00000600659 SRP19P09132 144 aaKnown RBP10.66□□□□□ -0.7
RPS28-203ENST00000600659 RPS20P60866 119 aaKnown RBP10.66□□□□□ -0.7
RPS28-203ENST00000600659 LELP1Q5T871 98 aa10.66□□□□□ -0.7
RPS28-203ENST00000600659 FER1L6-AS1Q8NA97 138 aa10.66□□□□□ -0.7
RPS28-203ENST00000600659 BIN3Q9NQY0 253 aa10.66□□□□□ -0.7
RPS28-203ENST00000600659 MSRB1Q9NZV6 116 aa10.66□□□□□ -0.7
RPS28-203ENST00000600659 TNFRSF18Q9Y5U5 241 aa10.66□□□□□ -0.7
RPS28-203ENST00000600659 LY96Q9Y6Y9 160 aa10.66□□□□□ -0.7
RPS28-203ENST00000600659 C9JQL5 133 aa10.65□□□□□ -0.7
RPS28-203ENST00000600659 SPANXN1Q5VSR9 72 aa10.65□□□□□ -0.7
RPS28-203ENST00000600659 CTRLP40313 264 aa10.64□□□□□ -0.71
RPS28-203ENST00000600659 LINC01556Q5JQF7 62 aa10.64□□□□□ -0.71
RPS28-203ENST00000600659 OR10G8Q8NGN5 311 aa10.64□□□□□ -0.71
RPS28-203ENST00000600659 EIF5A2Q9GZV4 153 aaKnown RBP10.64□□□□□ -0.71
RPS28-203ENST00000600659 RPP21Q9H633 154 aaKnown RBP10.64□□□□□ -0.71
RPS28-203ENST00000600659 IGHV3-38A0A0C4DH36 116 aa10.63□□□□□ -0.71
RPS28-203ENST00000600659 TRBV10-1A0A0K0K1A3 114 aa10.63□□□□□ -0.71
RPS28-203ENST00000600659 RAB4BP61018 213 aa10.63□□□□□ -0.71
RPS28-203ENST00000600659 UBE2D3P61077 147 aa10.63□□□□□ -0.71
RPS28-203ENST00000600659 SSTP61278 116 aa10.63□□□□□ -0.71
RPS28-203ENST00000600659 UBE2D2P62837 147 aa10.63□□□□□ -0.71
RPS28-203ENST00000600659 SRSF3P84103 164 aaKnown RBP10.63□□□□□ -0.71
RPS28-203ENST00000600659 LYZL1Q6UWQ5 148 aa10.63□□□□□ -0.71
RPS28-203ENST00000600659 FAM231DQ6ZW35 169 aa10.63□□□□□ -0.71
RPS28-203ENST00000600659 LINC01551Q86U37 167 aa10.63□□□□□ -0.71
RPS28-203ENST00000600659 Q8N3U1 123 aa10.63□□□□□ -0.71
RPS28-203ENST00000600659 NEXN-AS1Q8NBZ9 246 aa10.63□□□□□ -0.71
RPS28-203ENST00000600659 TPPP3Q9BW30 176 aa10.63□□□□□ -0.71
RPS28-203ENST00000600659 CNFNQ9BYD5 112 aa10.63□□□□□ -0.71
RPS28-203ENST00000600659 RYR1P21817 5038 aa10.63□□□□□ -0.71
RPS28-203ENST00000600659 APOBP04114 4563 aaKnown RBP10.63□□□□□ -0.71
RPS28-203ENST00000600659 CEBPGP53567 150 aa10.62□□□□□ -0.71
RPS28-203ENST00000600659 ZNF56Q15929 161 aa10.62□□□□□ -0.71
RPS28-203ENST00000600659 GTSF1Q8WW33 167 aa10.62□□□□□ -0.71
RPS28-203ENST00000600659 AP1S3Q96PC3 154 aa10.62□□□□□ -0.71
RPS28-203ENST00000600659 SMIM7Q9BQ49 75 aa10.62□□□□□ -0.71
RPS28-203ENST00000600659 XKRY2A2RUG3 117 aa10.61□□□□□ -0.71
RPS28-203ENST00000600659 K7EP13 123 aa10.61□□□□□ -0.71
RPS28-203ENST00000600659 CACNG7P62955 275 aa10.61□□□□□ -0.71
RPS28-203ENST00000600659 OR10J3Q5JRS4 329 aa10.61□□□□□ -0.71
RPS28-203ENST00000600659 TRBV7-3A0A075B6L6 115 aa10.6□□□□□ -0.71
RPS28-203ENST00000600659 F2Z2F3 143 aa10.6□□□□□ -0.71
RPS28-203ENST00000600659 EVI2AP22794 236 aa10.6□□□□□ -0.71
RPS28-203ENST00000600659 TRAV8-6A0A0B4J262 113 aa10.59□□□□□ -0.71
RPS28-203ENST00000600659 ZNF727A8MUV8 499 aa10.59□□□□□ -0.71
RPS28-203ENST00000600659 RPL36AP83881 106 aaKnown RBP10.59□□□□□ -0.71
RPS28-203ENST00000600659 WDR73Q6P4I2 378 aa10.59□□□□□ -0.71
RPS28-203ENST00000600659 RPL36ALQ969Q0 106 aaKnown RBP10.59□□□□□ -0.71
RPS28-203ENST00000600659 HSPG2P98160 4391 aa10.59□□□□□ -0.71
RPS28-203ENST00000600659 IBA57-AS1B1ANH7 110 aa10.58□□□□□ -0.71
RPS28-203ENST00000600659 NTF3P20783 257 aa10.58□□□□□ -0.71
RPS28-203ENST00000600659 C10orf126Q8N4M7 172 aa10.58□□□□□ -0.71
RPS28-203ENST00000600659 TRAV9-2A0A087WT02 112 aa10.58□□□□□ -0.72
RPS28-203ENST00000600659 M0QY20 66 aa10.58□□□□□ -0.72
RPS28-203ENST00000600659 GATCO43716 136 aaKnown RBP10.58□□□□□ -0.72
RPS28-203ENST00000600659 IGHV3-30P01768 117 aa10.58□□□□□ -0.72
RPS28-203ENST00000600659 IGHV3-33P01772 117 aa10.58□□□□□ -0.72
RPS28-203ENST00000600659 IGHV3-30-3P0DP02 117 aa10.58□□□□□ -0.72
RPS28-203ENST00000600659 IGHV3-30-5P0DP03 117 aa10.58□□□□□ -0.72
RPS28-203ENST00000600659 CT83Q5H943 113 aa10.58□□□□□ -0.72
RPS28-203ENST00000600659 SUMO4Q6EEV6 95 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 143.8 ms