RNA–Protein interactions for RNA: ENST00000599322.5

LIG1-218, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-218ENST00000599322 RPS20P60866 119 aaKnown RBP9.66□□□□□ -0.86
LIG1-218ENST00000599322 GAGE1Q13065 139 aa9.66□□□□□ -0.86
LIG1-218ENST00000599322 GAGE4Q13068 117 aa9.66□□□□□ -0.86
LIG1-218ENST00000599322 GAGE5Q13069 117 aa9.66□□□□□ -0.86
LIG1-218ENST00000599322 GAGE13Q4V321 117 aa9.66□□□□□ -0.86
LIG1-218ENST00000599322 SPANXN1Q5VSR9 72 aa9.66□□□□□ -0.86
LIG1-218ENST00000599322 WFDC10BQ8IUB3 73 aa9.66□□□□□ -0.86
LIG1-218ENST00000599322 SMIM12Q96EX1 92 aa9.66□□□□□ -0.86
LIG1-218ENST00000599322 SFRP2Q96HF1 295 aa9.66□□□□□ -0.86
LIG1-218ENST00000599322 MLST8Q9BVC4 326 aa9.66□□□□□ -0.86
LIG1-218ENST00000599322 KRTAP1-5Q9BYS1 174 aa9.66□□□□□ -0.86
LIG1-218ENST00000599322 A0A087WWC5 75 aa9.65□□□□□ -0.86
LIG1-218ENST00000599322 C16orf90A8MZG2 172 aa9.65□□□□□ -0.86
LIG1-218ENST00000599322 SMIM17P0DL12 118 aa9.65□□□□□ -0.86
LIG1-218ENST00000599322 BCL2P10415 239 aa9.65□□□□□ -0.86
LIG1-218ENST00000599322 ERVFC1-1P60608 527 aa9.65□□□□□ -0.86
LIG1-218ENST00000599322 CENPWQ5EE01 88 aa9.65□□□□□ -0.86
LIG1-218ENST00000599322 LELP1Q5T871 98 aa9.65□□□□□ -0.86
LIG1-218ENST00000599322 C9orf62Q8N4C0 152 aa9.65□□□□□ -0.86
LIG1-218ENST00000599322 SCRT2Q9NQ03 307 aa9.65□□□□□ -0.86
LIG1-218ENST00000599322 MSRB1Q9NZV6 116 aa9.65□□□□□ -0.86
LIG1-218ENST00000599322 A0A087WWL8 130 aa9.64□□□□□ -0.87
LIG1-218ENST00000599322 RPL36AP83881 106 aaKnown RBP9.64□□□□□ -0.87
LIG1-218ENST00000599322 RPL36ALQ969Q0 106 aaKnown RBP9.64□□□□□ -0.87
LIG1-218ENST00000599322 JPT2Q9H910 190 aa9.64□□□□□ -0.87
LIG1-218ENST00000599322 RPL19P84098 196 aaKnown RBP9.63□□□□□ -0.87
LIG1-218ENST00000599322 KCNIP4Q6PIL6 250 aa9.63□□□□□ -0.87
LIG1-218ENST00000599322 SAMD10Q9BYL1 202 aa9.63□□□□□ -0.87
LIG1-218ENST00000599322 URGCP-MRPS24S4R325 110 aa9.63□□□□□ -0.87
LIG1-218ENST00000599322 HSPG2P98160 4391 aa9.62□□□□□ -0.87
LIG1-218ENST00000599322 TRBV10-1A0A0K0K1A3 114 aa9.62□□□□□ -0.87
LIG1-218ENST00000599322 F5H697 171 aa9.62□□□□□ -0.87
LIG1-218ENST00000599322 PSCAO43653 123 aa9.62□□□□□ -0.87
LIG1-218ENST00000599322 P01737 135 aa9.62□□□□□ -0.87
LIG1-218ENST00000599322 OR5AL1P0C617 328 aa9.62□□□□□ -0.87
LIG1-218ENST00000599322 ZNF56Q15929 161 aa9.62□□□□□ -0.87
LIG1-218ENST00000599322 LINC01556Q5JQF7 62 aa9.62□□□□□ -0.87
LIG1-218ENST00000599322 ALKAL2Q6UX46 152 aa9.62□□□□□ -0.87
LIG1-218ENST00000599322 OR2D3Q8NGH3 330 aa9.62□□□□□ -0.87
LIG1-218ENST00000599322 DERL1Q9BUN8 251 aa9.62□□□□□ -0.87
LIG1-218ENST00000599322 TPPP3Q9BW30 176 aa9.62□□□□□ -0.87
LIG1-218ENST00000599322 RAB19A4D1S5 217 aa9.61□□□□□ -0.87
LIG1-218ENST00000599322 RAB4BP61018 213 aa9.61□□□□□ -0.87
LIG1-218ENST00000599322 SSTP61278 116 aa9.61□□□□□ -0.87
LIG1-218ENST00000599322 TOR2AQ5JU69 321 aa9.61□□□□□ -0.87
LIG1-218ENST00000599322 Q6ZSN1 163 aa9.61□□□□□ -0.87
LIG1-218ENST00000599322 SPATA12Q7Z6I5 190 aa9.61□□□□□ -0.87
LIG1-218ENST00000599322 C14orf178Q8N769 122 aaPredicted RBP9.61□□□□□ -0.87
LIG1-218ENST00000599322 SNAI2O43623 268 aa9.6□□□□□ -0.87
LIG1-218ENST00000599322 CACNG7P62955 275 aa9.6□□□□□ -0.87
LIG1-218ENST00000599322 UFSP1Q6NVU6 142 aa9.6□□□□□ -0.87
LIG1-218ENST00000599322 FER1L6-AS1Q8NA97 138 aa9.6□□□□□ -0.87
LIG1-218ENST00000599322 OR10AG1Q8NH19 301 aa9.6□□□□□ -0.87
LIG1-218ENST00000599322 AP1S3Q96PC3 154 aa9.6□□□□□ -0.87
LIG1-218ENST00000599322 SSBP4Q9BWG4 385 aaPredicted RBP9.6□□□□□ -0.87
LIG1-218ENST00000599322 RBFOX3A6NFN3 312 aa9.59□□□□□ -0.87
LIG1-218ENST00000599322 F2Z2F3 143 aa9.59□□□□□ -0.87
LIG1-218ENST00000599322 IGHV3-30P01768 117 aa9.59□□□□□ -0.87
LIG1-218ENST00000599322 IGHV3-33P01772 117 aa9.59□□□□□ -0.87
LIG1-218ENST00000599322 IGHV3-30-3P0DP02 117 aa9.59□□□□□ -0.87
LIG1-218ENST00000599322 IGHV3-30-5P0DP03 117 aa9.59□□□□□ -0.87
LIG1-218ENST00000599322 ZNF575Q86XF7 245 aa9.59□□□□□ -0.87
LIG1-218ENST00000599322 TM2D2Q9BX73 214 aa9.59□□□□□ -0.87
LIG1-218ENST00000599322 KRTAP4-5Q9BYR2 181 aa9.59□□□□□ -0.87
LIG1-218ENST00000599322 PGPEP1Q9NXJ5 209 aa9.59□□□□□ -0.87
LIG1-218ENST00000599322 TRBV7-3A0A075B6L6 115 aa9.58□□□□□ -0.88
LIG1-218ENST00000599322 IBA57-AS1B1ANH7 110 aa9.58□□□□□ -0.88
LIG1-218ENST00000599322 EIF5A2Q9GZV4 153 aaKnown RBP9.58□□□□□ -0.88
LIG1-218ENST00000599322 TNFRSF18Q9Y5U5 241 aa9.58□□□□□ -0.88
LIG1-218ENST00000599322 LRP1BQ9NZR2 4599 aa9.57□□□□□ -0.88
LIG1-218ENST00000599322 A0A087WX48 190 aa9.57□□□□□ -0.88
LIG1-218ENST00000599322 MUC21A0A0G2JKD1 596 aa9.57□□□□□ -0.88
LIG1-218ENST00000599322 MUC21A0A140T8X8 626 aa9.57□□□□□ -0.88
LIG1-218ENST00000599322 TMEM250H0YL14 139 aa9.57□□□□□ -0.88
LIG1-218ENST00000599322 H7C1H1 209 aa9.57□□□□□ -0.88
LIG1-218ENST00000599322 TRGC1P0CF51 173 aa9.57□□□□□ -0.88
LIG1-218ENST00000599322 ELOBQ15370 118 aa9.57□□□□□ -0.88
LIG1-218ENST00000599322 TMEM97Q5BJF2 176 aa9.57□□□□□ -0.88
LIG1-218ENST00000599322 Q9HAA7 133 aa9.57□□□□□ -0.88
LIG1-218ENST00000599322 TRAV8-3A0A0A6YYJ7 113 aa9.56□□□□□ -0.88
LIG1-218ENST00000599322 C19orf71A6NCJ1 209 aa9.56□□□□□ -0.88
LIG1-218ENST00000599322 IGLV2-8P01709 118 aa9.56□□□□□ -0.88
LIG1-218ENST00000599322 CEBPGP53567 150 aa9.56□□□□□ -0.88
LIG1-218ENST00000599322 PKIAP61925 76 aa9.56□□□□□ -0.88
LIG1-218ENST00000599322 LAGE3Q14657 143 aa9.56□□□□□ -0.88
LIG1-218ENST00000599322 Q6ZRN7 208 aaPredicted RBP9.56□□□□□ -0.88
LIG1-218ENST00000599322 RMI2Q96E14 147 aa9.56□□□□□ -0.88
LIG1-218ENST00000599322 A0A1B0GVG6 124 aa9.55□□□□□ -0.88
LIG1-218ENST00000599322 MGPP08493 103 aa9.55□□□□□ -0.88
LIG1-218ENST00000599322 LINC00694P0DN24 101 aa9.55□□□□□ -0.88
LIG1-218ENST00000599322 GZMBP10144 247 aa9.55□□□□□ -0.88
LIG1-218ENST00000599322 CDPF1Q6NVV7 123 aa9.55□□□□□ -0.88
LIG1-218ENST00000599322 SMIM15Q7Z3B0 74 aa9.55□□□□□ -0.88
LIG1-218ENST00000599322 COX11Q9Y6N1 276 aa9.55□□□□□ -0.88
LIG1-218ENST00000599322 A0A087WTM6 91 aa9.54□□□□□ -0.88
LIG1-218ENST00000599322 TMEM262E9PQX1 116 aa9.54□□□□□ -0.88
LIG1-218ENST00000599322 NKX2-5P52952 324 aaPredicted RBP9.54□□□□□ -0.88
LIG1-218ENST00000599322 UBE2D3P61077 147 aa9.54□□□□□ -0.88
LIG1-218ENST00000599322 UBE2D2P62837 147 aa9.54□□□□□ -0.88
LIG1-218ENST00000599322 NUDT10Q8NFP7 164 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms