RNA–Protein interactions for RNA: ENST00000598570.5

USHBP1-209, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 3

Gene USHBP1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-209ENST00000598570 OR10AG1Q8NH19 301 aa12.04□□□□□ -0.48
USHBP1-209ENST00000598570 PCNPQ8WW12 178 aaKnown RBP12.04□□□□□ -0.48
USHBP1-209ENST00000598570 KIF25-AS1Q9Y6Z4 181 aa12.04□□□□□ -0.48
USHBP1-209ENST00000598570 PKD1P98161 4303 aa12.03□□□□□ -0.48
USHBP1-209ENST00000598570 IGHV3-73A0A0B4J1V6 119 aa12.03□□□□□ -0.48
USHBP1-209ENST00000598570 TTC32Q5I0X7 151 aa12.03□□□□□ -0.48
USHBP1-209ENST00000598570 WDR73Q6P4I2 378 aa12.03□□□□□ -0.48
USHBP1-209ENST00000598570 NUDT10Q8NFP7 164 aa12.03□□□□□ -0.48
USHBP1-209ENST00000598570 NUDT11Q96G61 164 aa12.03□□□□□ -0.48
USHBP1-209ENST00000598570 Q9UF83 564 aa12.03□□□□□ -0.48
USHBP1-209ENST00000598570 SIVA1O15304 175 aa12.02□□□□□ -0.49
USHBP1-209ENST00000598570 SRP19P09132 144 aaKnown RBP12.02□□□□□ -0.49
USHBP1-209ENST00000598570 DNAH10OSP0CZ25 163 aa12.02□□□□□ -0.49
USHBP1-209ENST00000598570 LINC00315P59091 139 aa12.02□□□□□ -0.49
USHBP1-209ENST00000598570 FAM231DQ6ZW35 169 aa12.02□□□□□ -0.49
USHBP1-209ENST00000598570 DAZAP1Q96EP5 407 aaKnown RBP12.02□□□□□ -0.49
USHBP1-209ENST00000598570 CNFNQ9BYD5 112 aa12.02□□□□□ -0.49
USHBP1-209ENST00000598570 F2Z2F3 143 aa12.01□□□□□ -0.49
USHBP1-209ENST00000598570 M0R381 172 aa12.01□□□□□ -0.49
USHBP1-209ENST00000598570 C6orf223Q8N319 242 aa12.01□□□□□ -0.49
USHBP1-209ENST00000598570 C14orf178Q8N769 122 aaPredicted RBP12.01□□□□□ -0.49
USHBP1-209ENST00000598570 OR2D3Q8NGH3 330 aa12.01□□□□□ -0.49
USHBP1-209ENST00000598570 TRBV10-1A0A0K0K1A3 114 aa12□□□□□ -0.49
USHBP1-209ENST00000598570 P01737 135 aa12□□□□□ -0.49
USHBP1-209ENST00000598570 RAB4BP61018 213 aa12□□□□□ -0.49
USHBP1-209ENST00000598570 TOR2AQ5JU69 321 aa12□□□□□ -0.49
USHBP1-209ENST00000598570 SOHLH1Q5JUK2 328 aa12□□□□□ -0.49
USHBP1-209ENST00000598570 OR10G8Q8NGN5 311 aa12□□□□□ -0.49
USHBP1-209ENST00000598570 GTSF1LQ9H1H1 148 aa12□□□□□ -0.49
USHBP1-209ENST00000598570 SMDT1Q9H4I9 107 aa12□□□□□ -0.49
USHBP1-209ENST00000598570 FER1L6-AS1Q8NA97 138 aa11.99□□□□□ -0.49
USHBP1-209ENST00000598570 ATP6V0E2Q8NHE4 81 aa11.99□□□□□ -0.49
USHBP1-209ENST00000598570 A0A087WWL8 130 aa11.98□□□□□ -0.49
USHBP1-209ENST00000598570 XKRY2A2RUG3 117 aa11.98□□□□□ -0.49
USHBP1-209ENST00000598570 PRSS29PA6NIE9 313 aa11.98□□□□□ -0.49
USHBP1-209ENST00000598570 GZMBP10144 247 aa11.98□□□□□ -0.49
USHBP1-209ENST00000598570 CTRLP40313 264 aa11.98□□□□□ -0.49
USHBP1-209ENST00000598570 FOXA3P55318 350 aaPredicted RBP11.98□□□□□ -0.49
USHBP1-209ENST00000598570 Q6ZRN7 208 aaPredicted RBP11.98□□□□□ -0.49
USHBP1-209ENST00000598570 EIF5A2Q9GZV4 153 aaKnown RBP11.98□□□□□ -0.49
USHBP1-209ENST00000598570 C9JQL5 133 aa11.97□□□□□ -0.49
USHBP1-209ENST00000598570 CACNG7P62955 275 aa11.97□□□□□ -0.49
USHBP1-209ENST00000598570 LELP1Q5T871 98 aa11.97□□□□□ -0.49
USHBP1-209ENST00000598570 RPP21Q9H633 154 aaKnown RBP11.97□□□□□ -0.49
USHBP1-209ENST00000598570 PKHD1P08F94 4074 aa11.96□□□□□ -0.49
USHBP1-209ENST00000598570 FAM74A3Q4VXF1 159 aa11.96□□□□□ -0.49
USHBP1-209ENST00000598570 CT83Q5H943 113 aa11.96□□□□□ -0.49
USHBP1-209ENST00000598570 SPANXN1Q5VSR9 72 aa11.96□□□□□ -0.49
USHBP1-209ENST00000598570 LINC01551Q86U37 167 aa11.96□□□□□ -0.49
USHBP1-209ENST00000598570 WFDC10BQ8IUB3 73 aa11.96□□□□□ -0.49
USHBP1-209ENST00000598570 RNASE7Q9H1E1 156 aaKnown RBP11.96□□□□□ -0.49
USHBP1-209ENST00000598570 LINC01556Q5JQF7 62 aa11.95□□□□□ -0.5
USHBP1-209ENST00000598570 FAM74A4Q5TZK3 123 aa11.95□□□□□ -0.5
USHBP1-209ENST00000598570 LYZL1Q6UWQ5 148 aa11.95□□□□□ -0.5
USHBP1-209ENST00000598570 MSRB1Q9NZV6 116 aa11.95□□□□□ -0.5
USHBP1-209ENST00000598570 UBE2D3P61077 147 aa11.94□□□□□ -0.5
USHBP1-209ENST00000598570 UBE2D2P62837 147 aa11.94□□□□□ -0.5
USHBP1-209ENST00000598570 GTSF1Q8WW33 167 aa11.94□□□□□ -0.5
USHBP1-209ENST00000598570 SMIM7Q9BQ49 75 aa11.94□□□□□ -0.5
USHBP1-209ENST00000598570 TRBV7-3A0A075B6L6 115 aa11.93□□□□□ -0.5
USHBP1-209ENST00000598570 TRAV9-2A0A087WT02 112 aa11.93□□□□□ -0.5
USHBP1-209ENST00000598570 A0A087WWC5 75 aa11.93□□□□□ -0.5
USHBP1-209ENST00000598570 IGHV3-38A0A0C4DH36 116 aa11.93□□□□□ -0.5
USHBP1-209ENST00000598570 MUC21A0A0G2JKD1 596 aa11.93□□□□□ -0.5
USHBP1-209ENST00000598570 MUC21A0A140T8X8 626 aa11.93□□□□□ -0.5
USHBP1-209ENST00000598570 GAGE12JA6NER3 117 aa11.93□□□□□ -0.5
USHBP1-209ENST00000598570 SRSF3P84103 164 aaKnown RBP11.93□□□□□ -0.5
USHBP1-209ENST00000598570 GAGE1Q13065 139 aa11.93□□□□□ -0.5
USHBP1-209ENST00000598570 GAGE4Q13068 117 aa11.93□□□□□ -0.5
USHBP1-209ENST00000598570 GAGE5Q13069 117 aa11.93□□□□□ -0.5
USHBP1-209ENST00000598570 GAGE13Q4V321 117 aa11.93□□□□□ -0.5
USHBP1-209ENST00000598570 AP1S3Q96PC3 154 aa11.93□□□□□ -0.5
USHBP1-209ENST00000598570 OSTCQ9NRP0 149 aa11.93□□□□□ -0.5
USHBP1-209ENST00000598570 DNAH11Q96DT5 4516 aa11.92□□□□□ -0.5
USHBP1-209ENST00000598570 FAM231BA6NCW3 169 aa11.92□□□□□ -0.5
USHBP1-209ENST00000598570 ZNF727A8MUV8 499 aa11.92□□□□□ -0.5
USHBP1-209ENST00000598570 NTF3P20783 257 aa11.92□□□□□ -0.5
USHBP1-209ENST00000598570 TNP2Q05952 138 aa11.92□□□□□ -0.5
USHBP1-209ENST00000598570 PEA15Q15121 130 aa11.92□□□□□ -0.5
USHBP1-209ENST00000598570 TRAV8-6A0A0B4J262 113 aa11.91□□□□□ -0.5
USHBP1-209ENST00000598570 A8MWL6 223 aa11.91□□□□□ -0.5
USHBP1-209ENST00000598570 M0QY20 66 aa11.91□□□□□ -0.5
USHBP1-209ENST00000598570 EVI2AP22794 236 aa11.91□□□□□ -0.5
USHBP1-209ENST00000598570 NEXN-AS1Q8NBZ9 246 aa11.91□□□□□ -0.5
USHBP1-209ENST00000598570 IBA57-AS1B1ANH7 110 aa11.9□□□□□ -0.5
USHBP1-209ENST00000598570 RPL36AP83881 106 aaKnown RBP11.9□□□□□ -0.5
USHBP1-209ENST00000598570 TMEM241Q24JQ0 296 aa11.9□□□□□ -0.5
USHBP1-209ENST00000598570 C10orf126Q8N4M7 172 aa11.9□□□□□ -0.5
USHBP1-209ENST00000598570 RPL36ALQ969Q0 106 aaKnown RBP11.9□□□□□ -0.5
USHBP1-209ENST00000598570 GFRA4Q9GZZ7 299 aa11.9□□□□□ -0.5
USHBP1-209ENST00000598570 GATCO43716 136 aaKnown RBP11.89□□□□□ -0.51
USHBP1-209ENST00000598570 NFE4Q86UQ8 179 aa11.89□□□□□ -0.51
USHBP1-209ENST00000598570 TRGC1P0CF51 173 aa11.88□□□□□ -0.51
USHBP1-209ENST00000598570 ERVFC1-1P60608 527 aa11.88□□□□□ -0.51
USHBP1-209ENST00000598570 TSKUQ8WUA8 353 aa11.88□□□□□ -0.51
USHBP1-209ENST00000598570 ISOC2Q96AB3 205 aa11.88□□□□□ -0.51
USHBP1-209ENST00000598570 DNAJC30Q96LL9 226 aa11.88□□□□□ -0.51
USHBP1-209ENST00000598570 SMIM17P0DL12 118 aa11.87□□□□□ -0.51
USHBP1-209ENST00000598570 CEBPGP53567 150 aa11.87□□□□□ -0.51
USHBP1-209ENST00000598570 RPL23P62829 140 aaKnown RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms