RNA–Protein interactions for RNA: ENST00000596549.5

LIG1-212, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-212ENST00000596549 SYT8Q8NBV8 401 aa8.74□□□□□ -1.01
LIG1-212ENST00000596549 MLST8Q9BVC4 326 aa8.74□□□□□ -1.01
LIG1-212ENST00000596549 A0A087WWL8 130 aa8.73□□□□□ -1.01
LIG1-212ENST00000596549 LRCOL1A6NCL2 159 aa8.73□□□□□ -1.01
LIG1-212ENST00000596549 RHODO00212 210 aa8.73□□□□□ -1.01
LIG1-212ENST00000596549 EREGO14944 169 aa8.73□□□□□ -1.01
LIG1-212ENST00000596549 H2AFB1P0C5Y9 115 aa8.73□□□□□ -1.01
LIG1-212ENST00000596549 TPT1P13693 172 aaKnown RBP8.73□□□□□ -1.01
LIG1-212ENST00000596549 SFRP2Q96HF1 295 aa8.73□□□□□ -1.01
LIG1-212ENST00000596549 Q9HAA7 133 aa8.73□□□□□ -1.01
LIG1-212ENST00000596549 PGPEP1Q9NXJ5 209 aa8.73□□□□□ -1.01
LIG1-212ENST00000596549 PHLDA3Q9Y5J5 127 aa8.73□□□□□ -1.01
LIG1-212ENST00000596549 PFDN1O60925 122 aa8.72□□□□□ -1.01
LIG1-212ENST00000596549 KRTAP10-1P60331 282 aa8.72□□□□□ -1.01
LIG1-212ENST00000596549 CCL20P78556 96 aa8.72□□□□□ -1.01
LIG1-212ENST00000596549 ZFP82Q8N141 532 aa8.72□□□□□ -1.01
LIG1-212ENST00000596549 DERL1Q9BUN8 251 aa8.72□□□□□ -1.01
LIG1-212ENST00000596549 CXCL1P09341 107 aa8.71□□□□□ -1.02
LIG1-212ENST00000596549 XGP55808 180 aa8.71□□□□□ -1.02
LIG1-212ENST00000596549 EIF5AP63241 154 aaKnown RBP8.71□□□□□ -1.02
LIG1-212ENST00000596549 LAGE3Q14657 143 aa8.71□□□□□ -1.02
LIG1-212ENST00000596549 OR10AG1Q8NH19 301 aa8.71□□□□□ -1.02
LIG1-212ENST00000596549 C11orf52Q96A22 123 aa8.71□□□□□ -1.02
LIG1-212ENST00000596549 SNAI2O43623 268 aa8.7□□□□□ -1.02
LIG1-212ENST00000596549 S100A9P06702 114 aaKnown RBP8.7□□□□□ -1.02
LIG1-212ENST00000596549 WFDC2Q14508 124 aa8.7□□□□□ -1.02
LIG1-212ENST00000596549 PRR27Q6MZM9 219 aa8.7□□□□□ -1.02
LIG1-212ENST00000596549 BAGE2Q86Y30 109 aa8.7□□□□□ -1.02
LIG1-212ENST00000596549 GNG13Q9P2W3 67 aa8.7□□□□□ -1.02
LIG1-212ENST00000596549 PSCAO43653 123 aa8.69□□□□□ -1.02
LIG1-212ENST00000596549 RPL35P42766 123 aaKnown RBP8.69□□□□□ -1.02
LIG1-212ENST00000596549 DAZ4Q86SG3 579 aaKnown RBP8.69□□□□□ -1.02
LIG1-212ENST00000596549 TCTE3Q8IZS6 198 aa8.69□□□□□ -1.02
LIG1-212ENST00000596549 MANBALQ9NQG1 85 aa8.69□□□□□ -1.02
LIG1-212ENST00000596549 DAZ3Q9NR90 486 aaKnown RBP8.69□□□□□ -1.02
LIG1-212ENST00000596549 BOLA1Q9Y3E2 137 aa8.69□□□□□ -1.02
LIG1-212ENST00000596549 TRAV1-1A0A0B4J248 108 aa8.68□□□□□ -1.02
LIG1-212ENST00000596549 IGLV2-8P01709 118 aa8.68□□□□□ -1.02
LIG1-212ENST00000596549 SULT1A2P50226 295 aa8.68□□□□□ -1.02
LIG1-212ENST00000596549 Q8N814 137 aa8.68□□□□□ -1.02
LIG1-212ENST00000596549 SSBP4Q9BWG4 385 aaPredicted RBP8.68□□□□□ -1.02
LIG1-212ENST00000596549 A0A087WWC5 75 aa8.67□□□□□ -1.02
LIG1-212ENST00000596549 MUC21A0A0G2JKD1 596 aa8.67□□□□□ -1.02
LIG1-212ENST00000596549 MUC21A0A140T8X8 626 aa8.67□□□□□ -1.02
LIG1-212ENST00000596549 OR5AL1P0C617 328 aa8.67□□□□□ -1.02
LIG1-212ENST00000596549 UBE2D3P61077 147 aa8.67□□□□□ -1.02
LIG1-212ENST00000596549 UBE2D2P62837 147 aa8.67□□□□□ -1.02
LIG1-212ENST00000596549 CENPWQ5EE01 88 aa8.67□□□□□ -1.02
LIG1-212ENST00000596549 NIT1Q86X76 327 aa8.67□□□□□ -1.02
LIG1-212ENST00000596549 DNAJC30Q96LL9 226 aa8.67□□□□□ -1.02
LIG1-212ENST00000596549 TRBV20OR9-2A0A075B6H5 130 aa8.66□□□□□ -1.02
LIG1-212ENST00000596549 IGLV5-52A0A0A0MRZ9 124 aa8.66□□□□□ -1.02
LIG1-212ENST00000596549 TRBV10-1A0A0K0K1A3 114 aa8.66□□□□□ -1.02
LIG1-212ENST00000596549 GCSHP23434 173 aa8.66□□□□□ -1.02
LIG1-212ENST00000596549 RAB5CP51148 216 aa8.66□□□□□ -1.02
LIG1-212ENST00000596549 HAMPP81172 84 aa8.66□□□□□ -1.02
LIG1-212ENST00000596549 ZNF56Q15929 161 aa8.66□□□□□ -1.02
LIG1-212ENST00000596549 NEXN-AS1Q8NBZ9 246 aa8.66□□□□□ -1.02
LIG1-212ENST00000596549 OR10G8Q8NGN5 311 aa8.66□□□□□ -1.02
LIG1-212ENST00000596549 TRBV7-3A0A075B6L6 115 aa8.65□□□□□ -1.02
LIG1-212ENST00000596549 C1QBP02746 253 aa8.65□□□□□ -1.02
LIG1-212ENST00000596549 RPL36AP83881 106 aaKnown RBP8.65□□□□□ -1.02
LIG1-212ENST00000596549 NTN5Q8WTR8 489 aaPredicted RBP8.65□□□□□ -1.02
LIG1-212ENST00000596549 RPL36ALQ969Q0 106 aaKnown RBP8.65□□□□□ -1.02
LIG1-212ENST00000596549 FAT1Q14517 4588 aa8.64□□□□□ -1.03
LIG1-212ENST00000596549 C19orf71A6NCJ1 209 aa8.64□□□□□ -1.03
LIG1-212ENST00000596549 IGLC6P0CF74 106 aa8.64□□□□□ -1.03
LIG1-212ENST00000596549 GZMBP10144 247 aa8.64□□□□□ -1.03
LIG1-212ENST00000596549 RAB4BP61018 213 aa8.64□□□□□ -1.03
LIG1-212ENST00000596549 MEF2BQ02080 365 aaPredicted RBP8.64□□□□□ -1.03
LIG1-212ENST00000596549 SPANXN1Q5VSR9 72 aa8.64□□□□□ -1.03
LIG1-212ENST00000596549 Q6ZNX1 250 aa8.64□□□□□ -1.03
LIG1-212ENST00000596549 KIF25-AS1Q9Y6Z4 181 aa8.64□□□□□ -1.03
LIG1-212ENST00000596549 TRAV8-3A0A0A6YYJ7 113 aa8.63□□□□□ -1.03
LIG1-212ENST00000596549 RAB19A4D1S5 217 aa8.63□□□□□ -1.03
LIG1-212ENST00000596549 RBFOX3A6NFN3 312 aa8.63□□□□□ -1.03
LIG1-212ENST00000596549 LECT2O14960 151 aa8.63□□□□□ -1.03
LIG1-212ENST00000596549 BCL2P10415 239 aa8.63□□□□□ -1.03
LIG1-212ENST00000596549 EIF5AL1Q6IS14 154 aaKnown RBP8.63□□□□□ -1.03
LIG1-212ENST00000596549 SLC51BQ86UW2 128 aa8.63□□□□□ -1.03
LIG1-212ENST00000596549 EPM2AB3EWF7 344 aa8.62□□□□□ -1.03
LIG1-212ENST00000596549 SSTP61278 116 aa8.62□□□□□ -1.03
LIG1-212ENST00000596549 TOR2AQ5JU69 321 aa8.62□□□□□ -1.03
LIG1-212ENST00000596549 C9orf62Q8N4C0 152 aa8.62□□□□□ -1.03
LIG1-212ENST00000596549 SMIM12Q96EX1 92 aa8.62□□□□□ -1.03
LIG1-212ENST00000596549 AP1S3Q96PC3 154 aa8.62□□□□□ -1.03
LIG1-212ENST00000596549 TM2D2Q9BX73 214 aa8.62□□□□□ -1.03
LIG1-212ENST00000596549 KLK12Q9UKR0 248 aa8.62□□□□□ -1.03
LIG1-212ENST00000596549 TRBV6-8A0A0A6YYG3 113 aa8.61□□□□□ -1.03
LIG1-212ENST00000596549 TEX46H3BTG2 121 aa8.61□□□□□ -1.03
LIG1-212ENST00000596549 PDE6DO43924 150 aa8.61□□□□□ -1.03
LIG1-212ENST00000596549 GNG4P50150 75 aa8.61□□□□□ -1.03
LIG1-212ENST00000596549 Q5VSD8 79 aa8.61□□□□□ -1.03
LIG1-212ENST00000596549 FER1L6-AS1Q8NA97 138 aa8.61□□□□□ -1.03
LIG1-212ENST00000596549 OR2D3Q8NGH3 330 aa8.61□□□□□ -1.03
LIG1-212ENST00000596549 TMEM70Q9BUB7 260 aa8.61□□□□□ -1.03
LIG1-212ENST00000596549 CHCHD7Q9BUK0 85 aa8.61□□□□□ -1.03
LIG1-212ENST00000596549 FAM30AQ9NZY2 134 aa8.61□□□□□ -1.03
LIG1-212ENST00000596549 URGCP-MRPS24S4R325 110 aa8.61□□□□□ -1.03
LIG1-212ENST00000596549 IFNA1P01562 189 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms