RNA–Protein interactions for RNA: ENST00000596161.5

CCDC61-205, Transcript of coiled-coil domain containing 61, humanhuman

TSL 4

Gene CCDC61, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-205ENST00000596161 LYZL1Q6UWQ5 148 aa13.93□□□□□ -0.18
CCDC61-205ENST00000596161 SLC25A29Q8N8R3 303 aa13.93□□□□□ -0.18
CCDC61-205ENST00000596161 AP1S3Q96PC3 154 aa13.93□□□□□ -0.18
CCDC61-205ENST00000596161 SAMD10Q9BYL1 202 aa13.93□□□□□ -0.18
CCDC61-205ENST00000596161 NACAE9PAV3 2078 aa13.92□□□□□ -0.18
CCDC61-205ENST00000596161 ALMS1Q8TCU4 4167 aa13.92□□□□□ -0.18
CCDC61-205ENST00000596161 A0A087WWL8 130 aa13.92□□□□□ -0.18
CCDC61-205ENST00000596161 SRIP30626 198 aa13.92□□□□□ -0.18
CCDC61-205ENST00000596161 CTRLP40313 264 aa13.92□□□□□ -0.18
CCDC61-205ENST00000596161 WDR73Q6P4I2 378 aa13.92□□□□□ -0.18
CCDC61-205ENST00000596161 UQCC3Q6UW78 93 aa13.92□□□□□ -0.18
CCDC61-205ENST00000596161 K7EQD1 137 aa13.91□□□□□ -0.18
CCDC61-205ENST00000596161 CRYGDP07320 174 aa13.91□□□□□ -0.18
CCDC61-205ENST00000596161 SSTP61278 116 aa13.91□□□□□ -0.18
CCDC61-205ENST00000596161 SH2D6Q7Z4S9 175 aa13.91□□□□□ -0.18
CCDC61-205ENST00000596161 SMIM17P0DL12 118 aa13.9□□□□□ -0.18
CCDC61-205ENST00000596161 NEGR1Q7Z3B1 354 aa13.9□□□□□ -0.18
CCDC61-205ENST00000596161 TRGC1P0CF51 173 aa13.89□□□□□ -0.19
CCDC61-205ENST00000596161 OR10G8Q8NGN5 311 aa13.89□□□□□ -0.19
CCDC61-205ENST00000596161 TSKUQ8WUA8 353 aa13.89□□□□□ -0.19
CCDC61-205ENST00000596161 KMT2CQ8NEZ4 4911 aaKnown RBP13.89□□□□□ -0.19
CCDC61-205ENST00000596161 LOC100131303A0A0U1RQF7 123 aa13.88□□□□□ -0.19
CCDC61-205ENST00000596161 FAM231BA6NCW3 169 aa13.88□□□□□ -0.19
CCDC61-205ENST00000596161 Q6ZSN1 163 aa13.88□□□□□ -0.19
CCDC61-205ENST00000596161 GTSF1Q8WW33 167 aa13.88□□□□□ -0.19
CCDC61-205ENST00000596161 CNFNQ9BYD5 112 aa13.88□□□□□ -0.19
CCDC61-205ENST00000596161 GFRA4Q9GZZ7 299 aa13.88□□□□□ -0.19
CCDC61-205ENST00000596161 LINC00588Q9Y4M8 146 aa13.88□□□□□ -0.19
CCDC61-205ENST00000596161 V9GYV3 84 aa13.88□□□□□ -0.19
CCDC61-205ENST00000596161 NTF3P20783 257 aa13.87□□□□□ -0.19
CCDC61-205ENST00000596161 RAB4BP61018 213 aa13.87□□□□□ -0.19
CCDC61-205ENST00000596161 ZNF56Q15929 161 aa13.87□□□□□ -0.19
CCDC61-205ENST00000596161 ESRGQ1W209 222 aa13.87□□□□□ -0.19
CCDC61-205ENST00000596161 C14orf178Q8N769 122 aaPredicted RBP13.87□□□□□ -0.19
CCDC61-205ENST00000596161 BORCS7Q96B45 105 aa13.87□□□□□ -0.19
CCDC61-205ENST00000596161 FOXA3P55318 350 aaPredicted RBP13.86□□□□□ -0.19
CCDC61-205ENST00000596161 PNRC1Q12796 327 aaPredicted RBP13.86□□□□□ -0.19
CCDC61-205ENST00000596161 COMMD7Q86VX2 200 aa13.86□□□□□ -0.19
CCDC61-205ENST00000596161 MSRB1Q9NZV6 116 aa13.86□□□□□ -0.19
CCDC61-205ENST00000596161 MRPS16Q9Y3D3 137 aaKnown RBP13.86□□□□□ -0.19
CCDC61-205ENST00000596161 LYSTQ99698 3801 aa13.85□□□□□ -0.19
CCDC61-205ENST00000596161 LINC00862A6NCI5 91 aa13.85□□□□□ -0.19
CCDC61-205ENST00000596161 TWIST1Q15672 202 aa13.85□□□□□ -0.19
CCDC61-205ENST00000596161 PGLYRP4Q96LB8 373 aa13.85□□□□□ -0.19
CCDC61-205ENST00000596161 TRBV10-1A0A0K0K1A3 114 aa13.84□□□□□ -0.19
CCDC61-205ENST00000596161 F5H697 171 aa13.84□□□□□ -0.19
CCDC61-205ENST00000596161 SMIM15Q7Z3B0 74 aa13.84□□□□□ -0.19
CCDC61-205ENST00000596161 UPK3BQ9BT76 320 aa13.84□□□□□ -0.19
CCDC61-205ENST00000596161 KIF25-AS1Q9Y6Z4 181 aa13.84□□□□□ -0.19
CCDC61-205ENST00000596161 HIGD1CA8MV81 97 aa13.83□□□□□ -0.2
CCDC61-205ENST00000596161 MGPP08493 103 aa13.83□□□□□ -0.2
CCDC61-205ENST00000596161 LYPD5Q6UWN5 251 aa13.83□□□□□ -0.2
CCDC61-205ENST00000596161 ZNRF2Q8NHG8 242 aa13.83□□□□□ -0.2
CCDC61-205ENST00000596161 DPH3P1Q9H4G8 78 aa13.83□□□□□ -0.2
CCDC61-205ENST00000596161 DNAH1Q9P2D7 4330 aa13.83□□□□□ -0.2
CCDC61-205ENST00000596161 TMEM218A2RU14 115 aa13.82□□□□□ -0.2
CCDC61-205ENST00000596161 GAGE12JA6NER3 117 aa13.82□□□□□ -0.2
CCDC61-205ENST00000596161 PPP1R2P9O14990 202 aa13.82□□□□□ -0.2
CCDC61-205ENST00000596161 EVI2AP22794 236 aa13.82□□□□□ -0.2
CCDC61-205ENST00000596161 TIRAPP58753 221 aa13.82□□□□□ -0.2
CCDC61-205ENST00000596161 GAGE1Q13065 139 aa13.82□□□□□ -0.2
CCDC61-205ENST00000596161 GAGE4Q13068 117 aa13.82□□□□□ -0.2
CCDC61-205ENST00000596161 GAGE5Q13069 117 aa13.82□□□□□ -0.2
CCDC61-205ENST00000596161 GAGE13Q4V321 117 aa13.82□□□□□ -0.2
CCDC61-205ENST00000596161 ATP6V0E2Q8NHE4 81 aa13.82□□□□□ -0.2
CCDC61-205ENST00000596161 A0A1B0GUT8 65 aa13.81□□□□□ -0.2
CCDC61-205ENST00000596161 RPL36AP83881 106 aaKnown RBP13.81□□□□□ -0.2
CCDC61-205ENST00000596161 RPL36ALQ969Q0 106 aaKnown RBP13.81□□□□□ -0.2
CCDC61-205ENST00000596161 NAT8BQ9UHF3 227 aa13.81□□□□□ -0.2
CCDC61-205ENST00000596161 F8W036 122 aa13.8□□□□□ -0.2
CCDC61-205ENST00000596161 H7C1H1 209 aa13.8□□□□□ -0.2
CCDC61-205ENST00000596161 LINC00315P59091 139 aa13.8□□□□□ -0.2
CCDC61-205ENST00000596161 SACSQ9NZJ4 4579 aa13.8□□□□□ -0.2
CCDC61-205ENST00000596161 SMIM27A0A1W2PRY6 76 aa13.79□□□□□ -0.2
CCDC61-205ENST00000596161 LINC00694P0DN24 101 aa13.79□□□□□ -0.2
CCDC61-205ENST00000596161 Q9H8V8 135 aa13.79□□□□□ -0.2
CCDC61-205ENST00000596161 IGLV2-18A0A075B6J9 118 aa13.78□□□□□ -0.2
CCDC61-205ENST00000596161 MT-ND4LP03901 98 aa13.78□□□□□ -0.2
CCDC61-205ENST00000596161 RIGQ13278 110 aa13.78□□□□□ -0.2
CCDC61-205ENST00000596161 NUP35Q8NFH5 326 aa13.78□□□□□ -0.2
CCDC61-205ENST00000596161 SEC11CQ9BY50 192 aa13.78□□□□□ -0.2
CCDC61-205ENST00000596161 GTSF1LQ9H1H1 148 aa13.78□□□□□ -0.2
CCDC61-205ENST00000596161 TRBV7-3A0A075B6L6 115 aa13.77□□□□□ -0.21
CCDC61-205ENST00000596161 ANAPC16Q96DE5 110 aa13.77□□□□□ -0.21
CCDC61-205ENST00000596161 Q9UF83 564 aa13.77□□□□□ -0.21
CCDC61-205ENST00000596161 SIVA1O15304 175 aa13.76□□□□□ -0.21
CCDC61-205ENST00000596161 ADCYAP1P18509 176 aa13.76□□□□□ -0.21
CCDC61-205ENST00000596161 SUMO4Q6EEV6 95 aa13.76□□□□□ -0.21
CCDC61-205ENST00000596161 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.76□□□□□ -0.21
CCDC61-205ENST00000596161 NEXN-AS1Q8NBZ9 246 aa13.76□□□□□ -0.21
CCDC61-205ENST00000596161 VPS13DQ5THJ4 4388 aa13.76□□□□□ -0.21
CCDC61-205ENST00000596161 TTC32Q5I0X7 151 aa13.75□□□□□ -0.21
CCDC61-205ENST00000596161 DNAJC30Q96LL9 226 aa13.75□□□□□ -0.21
CCDC61-205ENST00000596161 A0A087WWC5 75 aa13.74□□□□□ -0.21
CCDC61-205ENST00000596161 TRAV8-6A0A0B4J262 113 aa13.74□□□□□ -0.21
CCDC61-205ENST00000596161 NBDYA0A0U1RRE5 68 aa13.74□□□□□ -0.21
CCDC61-205ENST00000596161 M0QY20 66 aa13.74□□□□□ -0.21
CCDC61-205ENST00000596161 M0R2N4 97 aa13.74□□□□□ -0.21
CCDC61-205ENST00000596161 UBE2D3P61077 147 aa13.74□□□□□ -0.21
CCDC61-205ENST00000596161 UBE2D2P62837 147 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms