RNA–Protein interactions for RNA: ENST00000595974.5

TRIM28-206, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-206ENST00000595974 MED9Q9NWA0 146 aa11.03□□□□□ -0.64
TRIM28-206ENST00000595974 IGLV2-8P01709 118 aa11.02□□□□□ -0.65
TRIM28-206ENST00000595974 OR5AL1P0C617 328 aa11.02□□□□□ -0.65
TRIM28-206ENST00000595974 C10orf126Q8N4M7 172 aa11.02□□□□□ -0.65
TRIM28-206ENST00000595974 GTSF1LQ9H1H1 148 aa11.02□□□□□ -0.65
TRIM28-206ENST00000595974 A0A087WWL8 130 aa11.01□□□□□ -0.65
TRIM28-206ENST00000595974 TRAV8-6A0A0B4J262 113 aa11.01□□□□□ -0.65
TRIM28-206ENST00000595974 CRYGDP07320 174 aa11.01□□□□□ -0.65
TRIM28-206ENST00000595974 LELP1Q5T871 98 aa11.01□□□□□ -0.65
TRIM28-206ENST00000595974 Q6ZRN7 208 aaPredicted RBP11.01□□□□□ -0.65
TRIM28-206ENST00000595974 NFE4Q86UQ8 179 aa11.01□□□□□ -0.65
TRIM28-206ENST00000595974 C14orf178Q8N769 122 aaPredicted RBP11.01□□□□□ -0.65
TRIM28-206ENST00000595974 OR10AG1Q8NH19 301 aa11.01□□□□□ -0.65
TRIM28-206ENST00000595974 SSBP4Q9BWG4 385 aaPredicted RBP11.01□□□□□ -0.65
TRIM28-206ENST00000595974 BIN3Q9NQY0 253 aa11.01□□□□□ -0.65
TRIM28-206ENST00000595974 KIAA1109Q2LD37 5005 aa11.01□□□□□ -0.65
TRIM28-206ENST00000595974 HERC2O95714 4834 aa11□□□□□ -0.65
TRIM28-206ENST00000595974 TRBV20OR9-2A0A075B6H5 130 aa11□□□□□ -0.65
TRIM28-206ENST00000595974 IGHV3-38A0A0C4DH36 116 aa11□□□□□ -0.65
TRIM28-206ENST00000595974 RAB19A4D1S5 217 aa11□□□□□ -0.65
TRIM28-206ENST00000595974 C19orf71A6NCJ1 209 aa11□□□□□ -0.65
TRIM28-206ENST00000595974 GAGE12JA6NER3 117 aa11□□□□□ -0.65
TRIM28-206ENST00000595974 NKX2-5P52952 324 aaPredicted RBP11□□□□□ -0.65
TRIM28-206ENST00000595974 GAGE1Q13065 139 aa11□□□□□ -0.65
TRIM28-206ENST00000595974 GAGE4Q13068 117 aa11□□□□□ -0.65
TRIM28-206ENST00000595974 GAGE5Q13069 117 aa11□□□□□ -0.65
TRIM28-206ENST00000595974 GAGE13Q4V321 117 aa11□□□□□ -0.65
TRIM28-206ENST00000595974 LINC01556Q5JQF7 62 aa11□□□□□ -0.65
TRIM28-206ENST00000595974 OR10J3Q5JRS4 329 aa11□□□□□ -0.65
TRIM28-206ENST00000595974 DAZAP1Q96EP5 407 aaKnown RBP11□□□□□ -0.65
TRIM28-206ENST00000595974 RPS20P60866 119 aaKnown RBP10.99□□□□□ -0.65
TRIM28-206ENST00000595974 SPANXN1Q5VSR9 72 aa10.99□□□□□ -0.65
TRIM28-206ENST00000595974 LYPD6BQ8NI32 183 aa10.99□□□□□ -0.65
TRIM28-206ENST00000595974 MSRB1Q9NZV6 116 aa10.99□□□□□ -0.65
TRIM28-206ENST00000595974 TRBV10-1A0A0K0K1A3 114 aa10.98□□□□□ -0.65
TRIM28-206ENST00000595974 OR2D3Q8NGH3 330 aa10.98□□□□□ -0.65
TRIM28-206ENST00000595974 A0A087WWC5 75 aa10.97□□□□□ -0.65
TRIM28-206ENST00000595974 XKRY2A2RUG3 117 aa10.97□□□□□ -0.65
TRIM28-206ENST00000595974 TMEM250H0YL14 139 aa10.97□□□□□ -0.65
TRIM28-206ENST00000595974 P01737 135 aa10.97□□□□□ -0.65
TRIM28-206ENST00000595974 Q9UF83 564 aa10.97□□□□□ -0.65
TRIM28-206ENST00000595974 RBFOX3A6NFN3 312 aa10.96□□□□□ -0.65
TRIM28-206ENST00000595974 IGLC6P0CF74 106 aa10.96□□□□□ -0.65
TRIM28-206ENST00000595974 RAB4BP61018 213 aa10.96□□□□□ -0.65
TRIM28-206ENST00000595974 ZNF56Q15929 161 aa10.96□□□□□ -0.65
TRIM28-206ENST00000595974 FER1L6-AS1Q8NA97 138 aa10.96□□□□□ -0.65
TRIM28-206ENST00000595974 AP1S3Q96PC3 154 aa10.96□□□□□ -0.65
TRIM28-206ENST00000595974 MUC21A0A0G2JKD1 596 aa10.95□□□□□ -0.66
TRIM28-206ENST00000595974 MUC21A0A140T8X8 626 aa10.95□□□□□ -0.66
TRIM28-206ENST00000595974 C16orf90A8MZG2 172 aa10.95□□□□□ -0.66
TRIM28-206ENST00000595974 ERVFC1-1P60608 527 aa10.95□□□□□ -0.66
TRIM28-206ENST00000595974 RPL36AP83881 106 aaKnown RBP10.95□□□□□ -0.66
TRIM28-206ENST00000595974 RPL36ALQ969Q0 106 aaKnown RBP10.95□□□□□ -0.66
TRIM28-206ENST00000595974 TNFRSF18Q9Y5U5 241 aa10.95□□□□□ -0.66
TRIM28-206ENST00000595974 GZMBP10144 247 aa10.94□□□□□ -0.66
TRIM28-206ENST00000595974 SPATA12Q7Z6I5 190 aa10.94□□□□□ -0.66
TRIM28-206ENST00000595974 TPPP3Q9BW30 176 aa10.94□□□□□ -0.66
TRIM28-206ENST00000595974 TRBV7-3A0A075B6L6 115 aa10.93□□□□□ -0.66
TRIM28-206ENST00000595974 SMIM17P0DL12 118 aa10.93□□□□□ -0.66
TRIM28-206ENST00000595974 CACNG7P62955 275 aa10.93□□□□□ -0.66
TRIM28-206ENST00000595974 OR10G8Q8NGN5 311 aa10.93□□□□□ -0.66
TRIM28-206ENST00000595974 IBA57-AS1B1ANH7 110 aa10.92□□□□□ -0.66
TRIM28-206ENST00000595974 F2Z2F3 143 aa10.92□□□□□ -0.66
TRIM28-206ENST00000595974 EREGO14944 169 aa10.92□□□□□ -0.66
TRIM28-206ENST00000595974 NDUFS6O75380 124 aaKnown RBP10.92□□□□□ -0.66
TRIM28-206ENST00000595974 IGHV3-30P01768 117 aa10.92□□□□□ -0.66
TRIM28-206ENST00000595974 IGHV3-33P01772 117 aa10.92□□□□□ -0.66
TRIM28-206ENST00000595974 IGHV3-30-3P0DP02 117 aa10.92□□□□□ -0.66
TRIM28-206ENST00000595974 IGHV3-30-5P0DP03 117 aa10.92□□□□□ -0.66
TRIM28-206ENST00000595974 UBE2D3P61077 147 aa10.92□□□□□ -0.66
TRIM28-206ENST00000595974 UBE2D2P62837 147 aa10.92□□□□□ -0.66
TRIM28-206ENST00000595974 LAGE3Q14657 143 aa10.92□□□□□ -0.66
TRIM28-206ENST00000595974 TOR2AQ5JU69 321 aa10.92□□□□□ -0.66
TRIM28-206ENST00000595974 NUDT10Q8NFP7 164 aa10.92□□□□□ -0.66
TRIM28-206ENST00000595974 NUDT11Q96G61 164 aa10.92□□□□□ -0.66
TRIM28-206ENST00000595974 LRP1BQ9NZR2 4599 aa10.92□□□□□ -0.66
TRIM28-206ENST00000595974 K7EN84 100 aa10.91□□□□□ -0.66
TRIM28-206ENST00000595974 SSTP61278 116 aa10.91□□□□□ -0.66
TRIM28-206ENST00000595974 OCC1Q8TAD7 63 aa10.91□□□□□ -0.66
TRIM28-206ENST00000595974 FAM210AQ96ND0 272 aa10.91□□□□□ -0.66
TRIM28-206ENST00000595974 RPP21Q9H633 154 aaKnown RBP10.91□□□□□ -0.66
TRIM28-206ENST00000595974 KIF25-AS1Q9Y6Z4 181 aa10.91□□□□□ -0.66
TRIM28-206ENST00000595974 RYR1P21817 5038 aa10.91□□□□□ -0.66
TRIM28-206ENST00000595974 F5H697 171 aa10.9□□□□□ -0.66
TRIM28-206ENST00000595974 CTRLP40313 264 aa10.9□□□□□ -0.66
TRIM28-206ENST00000595974 KRTAP10-2P60368 255 aa10.9□□□□□ -0.66
TRIM28-206ENST00000595974 NEXN-AS1Q8NBZ9 246 aa10.9□□□□□ -0.66
TRIM28-206ENST00000595974 EIF5A2Q9GZV4 153 aaKnown RBP10.9□□□□□ -0.66
TRIM28-206ENST00000595974 DNAH5Q8TE73 4624 aa10.9□□□□□ -0.66
TRIM28-206ENST00000595974 TRGC1P0CF51 173 aa10.89□□□□□ -0.67
TRIM28-206ENST00000595974 LYZL1Q6UWQ5 148 aa10.89□□□□□ -0.67
TRIM28-206ENST00000595974 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.89□□□□□ -0.67
TRIM28-206ENST00000595974 RNASE7Q9H1E1 156 aaKnown RBP10.89□□□□□ -0.67
TRIM28-206ENST00000595974 A0A087WTM6 91 aa10.88□□□□□ -0.67
TRIM28-206ENST00000595974 PSCAO43653 123 aa10.88□□□□□ -0.67
TRIM28-206ENST00000595974 CEBPGP53567 150 aa10.88□□□□□ -0.67
TRIM28-206ENST00000595974 WDR73Q6P4I2 378 aa10.88□□□□□ -0.67
TRIM28-206ENST00000595974 CHCHD7Q9BUK0 85 aa10.88□□□□□ -0.67
TRIM28-206ENST00000595974 Q9HAA7 133 aa10.88□□□□□ -0.67
TRIM28-206ENST00000595974 URGCP-MRPS24S4R325 110 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms