RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 MRPL16Q9NX20 251 aaKnown RBP9.39□□□□□ -0.91
SHKBP1-209ENST00000595803 TP53TG1Q9Y2A0 90 aa9.39□□□□□ -0.91
SHKBP1-209ENST00000595803 CSMD3Q7Z407 3707 aa9.38□□□□□ -0.91
SHKBP1-209ENST00000595803 TRGV1A0A0A0MS02 117 aa9.38□□□□□ -0.91
SHKBP1-209ENST00000595803 MIFP14174 115 aa9.38□□□□□ -0.91
SHKBP1-209ENST00000595803 EMP1P54849 157 aa9.38□□□□□ -0.91
SHKBP1-209ENST00000595803 RAB5BP61020 215 aa9.38□□□□□ -0.91
SHKBP1-209ENST00000595803 PIK3CD-AS1Q5SR53 167 aa9.38□□□□□ -0.91
SHKBP1-209ENST00000595803 AMN1Q8IY45 258 aa9.38□□□□□ -0.91
SHKBP1-209ENST00000595803 MUC7Q8TAX7 377 aa9.38□□□□□ -0.91
SHKBP1-209ENST00000595803 OVOL2Q9BRP0 275 aa9.38□□□□□ -0.91
SHKBP1-209ENST00000595803 DNAH7Q8WXX0 4024 aa9.38□□□□□ -0.91
SHKBP1-209ENST00000595803 A8MWV9 139 aa9.37□□□□□ -0.91
SHKBP1-209ENST00000595803 RAB4AP20338 218 aa9.37□□□□□ -0.91
SHKBP1-209ENST00000595803 SLAQ13239 276 aa9.37□□□□□ -0.91
SHKBP1-209ENST00000595803 LGALS9BQ3B8N2 356 aa9.37□□□□□ -0.91
SHKBP1-209ENST00000595803 IL17DQ8TAD2 202 aa9.37□□□□□ -0.91
SHKBP1-209ENST00000595803 RASL10AQ92737 203 aa9.37□□□□□ -0.91
SHKBP1-209ENST00000595803 NDUFAF3Q9BU61 184 aa9.37□□□□□ -0.91
SHKBP1-209ENST00000595803 JPT2Q9H910 190 aa9.37□□□□□ -0.91
SHKBP1-209ENST00000595803 MUC4Q99102 2169 aa9.37□□□□□ -0.91
SHKBP1-209ENST00000595803 A0A087WWL8 130 aa9.36□□□□□ -0.91
SHKBP1-209ENST00000595803 PLAC8L1A1L4L8 177 aa9.36□□□□□ -0.91
SHKBP1-209ENST00000595803 MGPP08493 103 aa9.36□□□□□ -0.91
SHKBP1-209ENST00000595803 CKS2P33552 79 aa9.36□□□□□ -0.91
SHKBP1-209ENST00000595803 SBSPONQ8IVN8 264 aa9.36□□□□□ -0.91
SHKBP1-209ENST00000595803 RNF185Q96GF1 192 aa9.36□□□□□ -0.91
SHKBP1-209ENST00000595803 TMA7Q9Y2S6 64 aaKnown RBP9.36□□□□□ -0.91
SHKBP1-209ENST00000595803 IGHV4-28A0A0C4DH34 117 aa9.35□□□□□ -0.91
SHKBP1-209ENST00000595803 F5H697 171 aa9.35□□□□□ -0.91
SHKBP1-209ENST00000595803 PHOX2AO14813 284 aa9.35□□□□□ -0.91
SHKBP1-209ENST00000595803 RS1O15537 224 aa9.35□□□□□ -0.91
SHKBP1-209ENST00000595803 MRPL51Q4U2R6 128 aaKnown RBP9.35□□□□□ -0.91
SHKBP1-209ENST00000595803 Q6ZTI0 123 aa9.35□□□□□ -0.91
SHKBP1-209ENST00000595803 SAMD10Q9BYL1 202 aa9.35□□□□□ -0.91
SHKBP1-209ENST00000595803 KIF25-AS1Q9Y6Z4 181 aa9.35□□□□□ -0.91
SHKBP1-209ENST00000595803 GAGE12BA1L429 117 aa9.34□□□□□ -0.91
SHKBP1-209ENST00000595803 GAGE7O76087 117 aa9.34□□□□□ -0.91
SHKBP1-209ENST00000595803 PPBPP02775 128 aa9.34□□□□□ -0.91
SHKBP1-209ENST00000595803 CRYGDP07320 174 aa9.34□□□□□ -0.91
SHKBP1-209ENST00000595803 NHLRC4P0CG21 123 aaPredicted RBP9.34□□□□□ -0.91
SHKBP1-209ENST00000595803 GAGE12FP0CL80 117 aa9.34□□□□□ -0.91
SHKBP1-209ENST00000595803 GAGE12GP0CL81 117 aa9.34□□□□□ -0.91
SHKBP1-209ENST00000595803 GAGE12IP0CL82 117 aa9.34□□□□□ -0.91
SHKBP1-209ENST00000595803 FAM74A4Q5TZK3 123 aa9.34□□□□□ -0.91
SHKBP1-209ENST00000595803 OR4C5Q8NGB2 326 aa9.34□□□□□ -0.91
SHKBP1-209ENST00000595803 SPATA25Q9BR10 227 aa9.34□□□□□ -0.91
SHKBP1-209ENST00000595803 RETNQ9HD89 108 aa9.34□□□□□ -0.91
SHKBP1-209ENST00000595803 HERC2O95714 4834 aa9.34□□□□□ -0.91
SHKBP1-209ENST00000595803 TRGV2A0A075B6R0 118 aa9.33□□□□□ -0.92
SHKBP1-209ENST00000595803 D6R8Y8 96 aa9.33□□□□□ -0.92
SHKBP1-209ENST00000595803 DEFB4AO15263 64 aa9.33□□□□□ -0.92
SHKBP1-209ENST00000595803 SRIP30626 198 aa9.33□□□□□ -0.92
SHKBP1-209ENST00000595803 CFAP126Q5VTH2 177 aa9.33□□□□□ -0.92
SHKBP1-209ENST00000595803 ORMDL3Q8N138 153 aa9.33□□□□□ -0.92
SHKBP1-209ENST00000595803 MRAP2Q96G30 205 aa9.33□□□□□ -0.92
SHKBP1-209ENST00000595803 ALKBH7Q9BT30 221 aaPredicted RBP9.33□□□□□ -0.92
SHKBP1-209ENST00000595803 IGHV3-73A0A0B4J1V6 119 aa9.32□□□□□ -0.92
SHKBP1-209ENST00000595803 TRAV4A0A0B4J268 109 aa9.32□□□□□ -0.92
SHKBP1-209ENST00000595803 LYRM9A8MSI8 78 aa9.32□□□□□ -0.92
SHKBP1-209ENST00000595803 RHODO00212 210 aa9.32□□□□□ -0.92
SHKBP1-209ENST00000595803 CIDEAO60543 219 aa9.32□□□□□ -0.92
SHKBP1-209ENST00000595803 HIST1H2BKO60814 126 aa9.32□□□□□ -0.92
SHKBP1-209ENST00000595803 HIST1H2BJP06899 126 aa9.32□□□□□ -0.92
SHKBP1-209ENST00000595803 DEFB130BP0DP73 79 aa9.32□□□□□ -0.92
SHKBP1-209ENST00000595803 DEFB130AP0DP74 79 aa9.32□□□□□ -0.92
SHKBP1-209ENST00000595803 HIST1H2BOP23527 126 aa9.32□□□□□ -0.92
SHKBP1-209ENST00000595803 HIST1H2BBP33778 126 aa9.32□□□□□ -0.92
SHKBP1-209ENST00000595803 NDUFA6P56556 154 aa9.32□□□□□ -0.92
SHKBP1-209ENST00000595803 HIST1H2BDP58876 126 aa9.32□□□□□ -0.92
SHKBP1-209ENST00000595803 LINC00315P59091 139 aa9.32□□□□□ -0.92
SHKBP1-209ENST00000595803 HIST1H2BCP62807 126 aa9.32□□□□□ -0.92
SHKBP1-209ENST00000595803 ZNF56Q15929 161 aa9.32□□□□□ -0.92
SHKBP1-209ENST00000595803 HIST2H2BEQ16778 126 aa9.32□□□□□ -0.92
SHKBP1-209ENST00000595803 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.32□□□□□ -0.92
SHKBP1-209ENST00000595803 FAM222AQ5U5X8 452 aa9.32□□□□□ -0.92
SHKBP1-209ENST00000595803 POM121L12Q8N7R1 296 aa9.32□□□□□ -0.92
SHKBP1-209ENST00000595803 Q8NAQ8 132 aa9.32□□□□□ -0.92
SHKBP1-209ENST00000595803 HIST1H2BHQ93079 126 aa9.32□□□□□ -0.92
SHKBP1-209ENST00000595803 PRELID3AQ96N28 172 aa9.32□□□□□ -0.92
SHKBP1-209ENST00000595803 HIST1H2BNQ99877 126 aa9.32□□□□□ -0.92
SHKBP1-209ENST00000595803 HIST1H2BMQ99879 126 aa9.32□□□□□ -0.92
SHKBP1-209ENST00000595803 SMKR1H3BMG3 65 aa9.31□□□□□ -0.92
SHKBP1-209ENST00000595803 S100A6P06703 90 aa9.31□□□□□ -0.92
SHKBP1-209ENST00000595803 SPART-AS1P0CW21 52 aa9.31□□□□□ -0.92
SHKBP1-209ENST00000595803 ZFP2Q6ZN57 461 aa9.31□□□□□ -0.92
SHKBP1-209ENST00000595803 ZMAT4Q9H898 229 aa9.31□□□□□ -0.92
SHKBP1-209ENST00000595803 DKK2Q9UBU2 259 aa9.31□□□□□ -0.92
SHKBP1-209ENST00000595803 TRAV26-2A0A0B4J265 109 aa9.3□□□□□ -0.92
SHKBP1-209ENST00000595803 NCR2O95944 276 aa9.3□□□□□ -0.92
SHKBP1-209ENST00000595803 PPP1R17O96001 155 aa9.3□□□□□ -0.92
SHKBP1-209ENST00000595803 IGHV3-53P01767 116 aa9.3□□□□□ -0.92
SHKBP1-209ENST00000595803 SUMO4Q6EEV6 95 aa9.3□□□□□ -0.92
SHKBP1-209ENST00000595803 BAGE3Q86Y29 109 aa9.3□□□□□ -0.92
SHKBP1-209ENST00000595803 TM2D3Q9BRN9 247 aa9.3□□□□□ -0.92
SHKBP1-209ENST00000595803 TEX48A0A1B0GUV7 120 aa9.29□□□□□ -0.92
SHKBP1-209ENST00000595803 H7C1H1 209 aa9.29□□□□□ -0.92
SHKBP1-209ENST00000595803 GATA1P15976 413 aaPredicted RBP9.29□□□□□ -0.92
SHKBP1-209ENST00000595803 Q0VG73 95 aa9.29□□□□□ -0.92
SHKBP1-209ENST00000595803 OR10J3Q5JRS4 329 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 112.4 ms