RNA–Protein interactions for RNA: ENST00000595758.5

LIG1-208, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-208ENST00000595758 F2Z2F3 143 aa9.96□□□□□ -0.82
LIG1-208ENST00000595758 CRYGDP07320 174 aa9.96□□□□□ -0.82
LIG1-208ENST00000595758 FAM74A4Q5TZK3 123 aa9.96□□□□□ -0.82
LIG1-208ENST00000595758 UFSP1Q6NVU6 142 aa9.96□□□□□ -0.82
LIG1-208ENST00000595758 PRADC1Q9BSG0 188 aa9.96□□□□□ -0.82
LIG1-208ENST00000595758 A8MWL6 223 aa9.95□□□□□ -0.82
LIG1-208ENST00000595758 K7EQD1 137 aa9.95□□□□□ -0.82
LIG1-208ENST00000595758 FAM3BP58499 235 aaPredicted RBP9.95□□□□□ -0.82
LIG1-208ENST00000595758 RPL23P62829 140 aaKnown RBP9.95□□□□□ -0.82
LIG1-208ENST00000595758 CACNG7P62955 275 aa9.95□□□□□ -0.82
LIG1-208ENST00000595758 RHOHQ15669 191 aa9.95□□□□□ -0.82
LIG1-208ENST00000595758 ADIRFQ15847 76 aa9.95□□□□□ -0.82
LIG1-208ENST00000595758 ESRGQ1W209 222 aa9.95□□□□□ -0.82
LIG1-208ENST00000595758 LYZL1Q6UWQ5 148 aa9.95□□□□□ -0.82
LIG1-208ENST00000595758 Q6ZSN1 163 aa9.95□□□□□ -0.82
LIG1-208ENST00000595758 OSTCQ9NRP0 149 aa9.95□□□□□ -0.82
LIG1-208ENST00000595758 LINC00588Q9Y4M8 146 aa9.95□□□□□ -0.82
LIG1-208ENST00000595758 LOC100131303A0A0U1RQF7 123 aa9.94□□□□□ -0.82
LIG1-208ENST00000595758 SRIP30626 198 aa9.94□□□□□ -0.82
LIG1-208ENST00000595758 CT83Q5H943 113 aa9.94□□□□□ -0.82
LIG1-208ENST00000595758 NEGR1Q7Z3B1 354 aa9.94□□□□□ -0.82
LIG1-208ENST00000595758 C15orf54Q8N8G6 183 aa9.94□□□□□ -0.82
LIG1-208ENST00000595758 ISOC2Q96AB3 205 aa9.94□□□□□ -0.82
LIG1-208ENST00000595758 CTRLP40313 264 aa9.93□□□□□ -0.82
LIG1-208ENST00000595758 WDR73Q6P4I2 378 aa9.93□□□□□ -0.82
LIG1-208ENST00000595758 SH2D6Q7Z4S9 175 aa9.93□□□□□ -0.82
LIG1-208ENST00000595758 C14orf178Q8N769 122 aaPredicted RBP9.93□□□□□ -0.82
LIG1-208ENST00000595758 GTSF1Q8WW33 167 aa9.93□□□□□ -0.82
LIG1-208ENST00000595758 AP1S3Q96PC3 154 aa9.93□□□□□ -0.82
LIG1-208ENST00000595758 SMIM17P0DL12 118 aa9.92□□□□□ -0.82
LIG1-208ENST00000595758 MSRB1Q9NZV6 116 aa9.92□□□□□ -0.82
LIG1-208ENST00000595758 NTF3P20783 257 aa9.91□□□□□ -0.82
LIG1-208ENST00000595758 RAB4BP61018 213 aa9.91□□□□□ -0.82
LIG1-208ENST00000595758 LYPD5Q6UWN5 251 aa9.91□□□□□ -0.82
LIG1-208ENST00000595758 OR10G8Q8NGN5 311 aa9.91□□□□□ -0.82
LIG1-208ENST00000595758 TSKUQ8WUA8 353 aa9.91□□□□□ -0.82
LIG1-208ENST00000595758 CNFNQ9BYD5 112 aa9.91□□□□□ -0.82
LIG1-208ENST00000595758 MRPS16Q9Y3D3 137 aaKnown RBP9.91□□□□□ -0.82
LIG1-208ENST00000595758 KIF25-AS1Q9Y6Z4 181 aa9.91□□□□□ -0.82
LIG1-208ENST00000595758 V9GYV3 84 aa9.91□□□□□ -0.82
LIG1-208ENST00000595758 F5H697 171 aa9.9□□□□□ -0.82
LIG1-208ENST00000595758 TRGC1P0CF51 173 aa9.9□□□□□ -0.82
LIG1-208ENST00000595758 FOXA3P55318 350 aaPredicted RBP9.9□□□□□ -0.82
LIG1-208ENST00000595758 TWIST1Q15672 202 aa9.9□□□□□ -0.82
LIG1-208ENST00000595758 ZNF56Q15929 161 aa9.9□□□□□ -0.82
LIG1-208ENST00000595758 UQCC3Q6UW78 93 aa9.9□□□□□ -0.82
LIG1-208ENST00000595758 ZNRF2Q8NHG8 242 aa9.9□□□□□ -0.82
LIG1-208ENST00000595758 PGLYRP4Q96LB8 373 aa9.9□□□□□ -0.82
LIG1-208ENST00000595758 GFRA4Q9GZZ7 299 aa9.9□□□□□ -0.82
LIG1-208ENST00000595758 IGLV2-18A0A075B6J9 118 aa9.89□□□□□ -0.83
LIG1-208ENST00000595758 FAM231BA6NCW3 169 aa9.89□□□□□ -0.83
LIG1-208ENST00000595758 GAGE12JA6NER3 117 aa9.89□□□□□ -0.83
LIG1-208ENST00000595758 GAGE1Q13065 139 aa9.89□□□□□ -0.83
LIG1-208ENST00000595758 GAGE4Q13068 117 aa9.89□□□□□ -0.83
LIG1-208ENST00000595758 GAGE5Q13069 117 aa9.89□□□□□ -0.83
LIG1-208ENST00000595758 GAGE13Q4V321 117 aa9.89□□□□□ -0.83
LIG1-208ENST00000595758 Q9UF83 564 aa9.89□□□□□ -0.83
LIG1-208ENST00000595758 DNAH6Q9C0G6 4158 aa9.88□□□□□ -0.83
LIG1-208ENST00000595758 TRBV10-1A0A0K0K1A3 114 aa9.88□□□□□ -0.83
LIG1-208ENST00000595758 EVI2AP22794 236 aa9.88□□□□□ -0.83
LIG1-208ENST00000595758 LINC00315P59091 139 aa9.88□□□□□ -0.83
LIG1-208ENST00000595758 COMMD7Q86VX2 200 aa9.88□□□□□ -0.83
LIG1-208ENST00000595758 ATP6V0E2Q8NHE4 81 aa9.88□□□□□ -0.83
LIG1-208ENST00000595758 BORCS7Q96B45 105 aa9.88□□□□□ -0.83
LIG1-208ENST00000595758 UPK3BQ9BT76 320 aa9.88□□□□□ -0.83
LIG1-208ENST00000595758 Q9H8V8 135 aa9.88□□□□□ -0.83
LIG1-208ENST00000595758 KMT2AQ03164 3969 aa9.88□□□□□ -0.83
LIG1-208ENST00000595758 HIGD1CA8MV81 97 aa9.87□□□□□ -0.83
LIG1-208ENST00000595758 M0R2N4 97 aa9.87□□□□□ -0.83
LIG1-208ENST00000595758 MGPP08493 103 aa9.87□□□□□ -0.83
LIG1-208ENST00000595758 TIRAPP58753 221 aa9.87□□□□□ -0.83
LIG1-208ENST00000595758 A0A1B0GUT8 65 aa9.86□□□□□ -0.83
LIG1-208ENST00000595758 TMEM218A2RU14 115 aa9.86□□□□□ -0.83
LIG1-208ENST00000595758 LINC00862A6NCI5 91 aa9.86□□□□□ -0.83
LIG1-208ENST00000595758 LINC00694P0DN24 101 aa9.86□□□□□ -0.83
LIG1-208ENST00000595758 PNRC1Q12796 327 aaPredicted RBP9.86□□□□□ -0.83
LIG1-208ENST00000595758 SMIM15Q7Z3B0 74 aa9.86□□□□□ -0.83
LIG1-208ENST00000595758 DPH3P1Q9H4G8 78 aa9.86□□□□□ -0.83
LIG1-208ENST00000595758 RPL36AP83881 106 aaKnown RBP9.85□□□□□ -0.83
LIG1-208ENST00000595758 NUP35Q8NFH5 326 aa9.85□□□□□ -0.83
LIG1-208ENST00000595758 RPL36ALQ969Q0 106 aaKnown RBP9.85□□□□□ -0.83
LIG1-208ENST00000595758 GTSF1LQ9H1H1 148 aa9.85□□□□□ -0.83
LIG1-208ENST00000595758 NAT8BQ9UHF3 227 aa9.85□□□□□ -0.83
LIG1-208ENST00000595758 TRBV7-3A0A075B6L6 115 aa9.84□□□□□ -0.83
LIG1-208ENST00000595758 NBDYA0A0U1RRE5 68 aa9.84□□□□□ -0.83
LIG1-208ENST00000595758 SMIM27A0A1W2PRY6 76 aa9.84□□□□□ -0.83
LIG1-208ENST00000595758 PPP1R2P9O14990 202 aa9.84□□□□□ -0.83
LIG1-208ENST00000595758 RIGQ13278 110 aa9.84□□□□□ -0.83
LIG1-208ENST00000595758 SUMO4Q6EEV6 95 aa9.84□□□□□ -0.83
LIG1-208ENST00000595758 Q6ZR54 194 aa9.84□□□□□ -0.83
LIG1-208ENST00000595758 F8W036 122 aa9.83□□□□□ -0.84
LIG1-208ENST00000595758 H7C1H1 209 aa9.83□□□□□ -0.84
LIG1-208ENST00000595758 M0QY20 66 aa9.83□□□□□ -0.84
LIG1-208ENST00000595758 SIVA1O15304 175 aa9.83□□□□□ -0.84
LIG1-208ENST00000595758 MT-ND4LP03901 98 aa9.83□□□□□ -0.84
LIG1-208ENST00000595758 NEXN-AS1Q8NBZ9 246 aa9.83□□□□□ -0.84
LIG1-208ENST00000595758 TRAV8-6A0A0B4J262 113 aa9.82□□□□□ -0.84
LIG1-208ENST00000595758 ADCYAP1P18509 176 aa9.82□□□□□ -0.84
LIG1-208ENST00000595758 UBE2D3P61077 147 aa9.82□□□□□ -0.84
LIG1-208ENST00000595758 UBE2D2P62837 147 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 115.3 ms