RNA–Protein interactions for RNA: ENST00000595631.5

SHKBP1-207, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-207ENST00000595631 RHOHQ15669 191 aa9.48□□□□□ -0.89
SHKBP1-207ENST00000595631 SPANXN1Q5VSR9 72 aa9.48□□□□□ -0.89
SHKBP1-207ENST00000595631 LYPD5Q6UWN5 251 aa9.48□□□□□ -0.89
SHKBP1-207ENST00000595631 Q6ZR54 194 aa9.48□□□□□ -0.89
SHKBP1-207ENST00000595631 NEGR1Q7Z3B1 354 aa9.48□□□□□ -0.89
SHKBP1-207ENST00000595631 RPP21Q9H633 154 aaKnown RBP9.48□□□□□ -0.89
SHKBP1-207ENST00000595631 LINC01551Q86U37 167 aa9.47□□□□□ -0.89
SHKBP1-207ENST00000595631 PRADC1Q9BSG0 188 aa9.47□□□□□ -0.89
SHKBP1-207ENST00000595631 UPK3BQ9BT76 320 aa9.47□□□□□ -0.89
SHKBP1-207ENST00000595631 Q9H8V8 135 aa9.47□□□□□ -0.89
SHKBP1-207ENST00000595631 MSRB1Q9NZV6 116 aa9.47□□□□□ -0.89
SHKBP1-207ENST00000595631 RHODO00212 210 aa9.46□□□□□ -0.9
SHKBP1-207ENST00000595631 GATCO43716 136 aaKnown RBP9.46□□□□□ -0.9
SHKBP1-207ENST00000595631 PEA15Q15121 130 aa9.46□□□□□ -0.9
SHKBP1-207ENST00000595631 LYZL1Q6UWQ5 148 aa9.46□□□□□ -0.9
SHKBP1-207ENST00000595631 LY96Q9Y6Y9 160 aa9.46□□□□□ -0.9
SHKBP1-207ENST00000595631 NBDYA0A0U1RRE5 68 aa9.45□□□□□ -0.9
SHKBP1-207ENST00000595631 XKRY2A2RUG3 117 aa9.45□□□□□ -0.9
SHKBP1-207ENST00000595631 GAGE12JA6NER3 117 aa9.45□□□□□ -0.9
SHKBP1-207ENST00000595631 ERVFC1-1P60608 527 aa9.45□□□□□ -0.9
SHKBP1-207ENST00000595631 RAB14P61106 215 aa9.45□□□□□ -0.9
SHKBP1-207ENST00000595631 GAGE1Q13065 139 aa9.45□□□□□ -0.9
SHKBP1-207ENST00000595631 GAGE4Q13068 117 aa9.45□□□□□ -0.9
SHKBP1-207ENST00000595631 GAGE5Q13069 117 aa9.45□□□□□ -0.9
SHKBP1-207ENST00000595631 GAGE13Q4V321 117 aa9.45□□□□□ -0.9
SHKBP1-207ENST00000595631 GTSF1Q8WW33 167 aa9.45□□□□□ -0.9
SHKBP1-207ENST00000595631 KRTAP1-5Q9BYS1 174 aa9.45□□□□□ -0.9
SHKBP1-207ENST00000595631 LINC00694P0DN24 101 aa9.44□□□□□ -0.9
SHKBP1-207ENST00000595631 CTRLP40313 264 aa9.44□□□□□ -0.9
SHKBP1-207ENST00000595631 ZNF56Q15929 161 aa9.44□□□□□ -0.9
SHKBP1-207ENST00000595631 NDUFA5Q16718 116 aa9.44□□□□□ -0.9
SHKBP1-207ENST00000595631 FAM231DQ6ZW35 169 aa9.44□□□□□ -0.9
SHKBP1-207ENST00000595631 WFDC10BQ8IUB3 73 aa9.44□□□□□ -0.9
SHKBP1-207ENST00000595631 KIF25-AS1Q9Y6Z4 181 aa9.44□□□□□ -0.9
SHKBP1-207ENST00000595631 DNAH10Q8IVF4 4471 aa9.43□□□□□ -0.9
SHKBP1-207ENST00000595631 RPL23P62829 140 aaKnown RBP9.43□□□□□ -0.9
SHKBP1-207ENST00000595631 CACNG7P62955 275 aa9.43□□□□□ -0.9
SHKBP1-207ENST00000595631 TMEM241Q24JQ0 296 aa9.43□□□□□ -0.9
SHKBP1-207ENST00000595631 FAM74A3Q4VXF1 159 aa9.43□□□□□ -0.9
SHKBP1-207ENST00000595631 CLLU1Q5K131 121 aa9.43□□□□□ -0.9
SHKBP1-207ENST00000595631 AP1S3Q96PC3 154 aa9.43□□□□□ -0.9
SHKBP1-207ENST00000595631 NAT8Q9UHE5 227 aa9.43□□□□□ -0.9
SHKBP1-207ENST00000595631 A0A1W2PPQ1 181 aa9.42□□□□□ -0.9
SHKBP1-207ENST00000595631 F2Z2F3 143 aa9.42□□□□□ -0.9
SHKBP1-207ENST00000595631 RTL8CO15255 209 aa9.42□□□□□ -0.9
SHKBP1-207ENST00000595631 SIVA1O15304 175 aa9.42□□□□□ -0.9
SHKBP1-207ENST00000595631 MGPP08493 103 aa9.42□□□□□ -0.9
SHKBP1-207ENST00000595631 NTF3P20783 257 aa9.42□□□□□ -0.9
SHKBP1-207ENST00000595631 LINC00315P59091 139 aa9.42□□□□□ -0.9
SHKBP1-207ENST00000595631 ADIRFQ15847 76 aa9.42□□□□□ -0.9
SHKBP1-207ENST00000595631 ATP6V0E2Q8NHE4 81 aa9.42□□□□□ -0.9
SHKBP1-207ENST00000595631 ISOC2Q96AB3 205 aa9.42□□□□□ -0.9
SHKBP1-207ENST00000595631 SMDT1Q9H4I9 107 aa9.42□□□□□ -0.9
SHKBP1-207ENST00000595631 F5H697 171 aa9.41□□□□□ -0.9
SHKBP1-207ENST00000595631 EVI2AP22794 236 aa9.41□□□□□ -0.9
SHKBP1-207ENST00000595631 RAB4BP61018 213 aa9.41□□□□□ -0.9
SHKBP1-207ENST00000595631 SOHLH1Q5JUK2 328 aa9.41□□□□□ -0.9
SHKBP1-207ENST00000595631 SH2D6Q7Z4S9 175 aa9.41□□□□□ -0.9
SHKBP1-207ENST00000595631 PGLYRP4Q96LB8 373 aa9.41□□□□□ -0.9
SHKBP1-207ENST00000595631 OSTCQ9NRP0 149 aa9.41□□□□□ -0.9
SHKBP1-207ENST00000595631 FRAS1Q86XX4 4008 aa9.41□□□□□ -0.9
SHKBP1-207ENST00000595631 A8MWL6 223 aa9.4□□□□□ -0.9
SHKBP1-207ENST00000595631 SMIM17P0DL12 118 aa9.4□□□□□ -0.9
SHKBP1-207ENST00000595631 TWIST1Q15672 202 aa9.4□□□□□ -0.9
SHKBP1-207ENST00000595631 V9GYV3 84 aa9.4□□□□□ -0.9
SHKBP1-207ENST00000595631 DNAH2Q9P225 4427 aa9.39□□□□□ -0.91
SHKBP1-207ENST00000595631 TIRAPP58753 221 aa9.39□□□□□ -0.91
SHKBP1-207ENST00000595631 CT83Q5H943 113 aa9.39□□□□□ -0.91
SHKBP1-207ENST00000595631 C1orf134Q5TEV5 83 aa9.39□□□□□ -0.91
SHKBP1-207ENST00000595631 NEXN-AS1Q8NBZ9 246 aa9.39□□□□□ -0.91
SHKBP1-207ENST00000595631 CNFNQ9BYD5 112 aa9.39□□□□□ -0.91
SHKBP1-207ENST00000595631 GTSF1LQ9H1H1 148 aa9.39□□□□□ -0.91
SHKBP1-207ENST00000595631 TRGC1P0CF51 173 aa9.38□□□□□ -0.91
SHKBP1-207ENST00000595631 FOXA3P55318 350 aaPredicted RBP9.38□□□□□ -0.91
SHKBP1-207ENST00000595631 OR10J3Q5JRS4 329 aa9.38□□□□□ -0.91
SHKBP1-207ENST00000595631 SUMO4Q6EEV6 95 aa9.38□□□□□ -0.91
SHKBP1-207ENST00000595631 WDR73Q6P4I2 378 aa9.38□□□□□ -0.91
SHKBP1-207ENST00000595631 C15orf54Q8N8G6 183 aa9.38□□□□□ -0.91
SHKBP1-207ENST00000595631 TSKUQ8WUA8 353 aa9.38□□□□□ -0.91
SHKBP1-207ENST00000595631 IGHV3-38A0A0C4DH36 116 aa9.37□□□□□ -0.91
SHKBP1-207ENST00000595631 TRBV10-1A0A0K0K1A3 114 aa9.37□□□□□ -0.91
SHKBP1-207ENST00000595631 HIGD1CA8MV81 97 aa9.37□□□□□ -0.91
SHKBP1-207ENST00000595631 UBE2D3P61077 147 aa9.37□□□□□ -0.91
SHKBP1-207ENST00000595631 UBE2D2P62837 147 aa9.37□□□□□ -0.91
SHKBP1-207ENST00000595631 RPL36AP83881 106 aaKnown RBP9.37□□□□□ -0.91
SHKBP1-207ENST00000595631 TTC32Q5I0X7 151 aa9.37□□□□□ -0.91
SHKBP1-207ENST00000595631 LELP1Q5T871 98 aa9.37□□□□□ -0.91
SHKBP1-207ENST00000595631 C6orf223Q8N319 242 aa9.37□□□□□ -0.91
SHKBP1-207ENST00000595631 Q8N3U1 123 aa9.37□□□□□ -0.91
SHKBP1-207ENST00000595631 OR10G8Q8NGN5 311 aa9.37□□□□□ -0.91
SHKBP1-207ENST00000595631 RPL36ALQ969Q0 106 aaKnown RBP9.37□□□□□ -0.91
SHKBP1-207ENST00000595631 DPH3P1Q9H4G8 78 aa9.37□□□□□ -0.91
SHKBP1-207ENST00000595631 TRBV7-3A0A075B6L6 115 aa9.36□□□□□ -0.91
SHKBP1-207ENST00000595631 M0QY20 66 aa9.36□□□□□ -0.91
SHKBP1-207ENST00000595631 TNFRSF18Q9Y5U5 241 aa9.36□□□□□ -0.91
SHKBP1-207ENST00000595631 TRAV8-6A0A0B4J262 113 aa9.35□□□□□ -0.91
SHKBP1-207ENST00000595631 LINC00862A6NCI5 91 aa9.35□□□□□ -0.91
SHKBP1-207ENST00000595631 PRSS29PA6NIE9 313 aa9.35□□□□□ -0.91
SHKBP1-207ENST00000595631 IGHV3-30P01768 117 aa9.35□□□□□ -0.91
SHKBP1-207ENST00000595631 IGHV3-33P01772 117 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms