RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 TIRAPP58753 221 aa7.47□□□□□ -1.21
SHKBP1-206ENST00000595523 BLOC1S1P78537 153 aa7.47□□□□□ -1.21
SHKBP1-206ENST00000595523 Q6ZRN7 208 aaPredicted RBP7.47□□□□□ -1.21
SHKBP1-206ENST00000595523 SH2D6Q7Z4S9 175 aa7.47□□□□□ -1.21
SHKBP1-206ENST00000595523 ZFP82Q8N141 532 aa7.47□□□□□ -1.21
SHKBP1-206ENST00000595523 SMIM12Q96EX1 92 aa7.47□□□□□ -1.21
SHKBP1-206ENST00000595523 LRP1BQ9NZR2 4599 aa7.47□□□□□ -1.21
SHKBP1-206ENST00000595523 MUC21A0A0G2JKD1 596 aa7.46□□□□□ -1.22
SHKBP1-206ENST00000595523 MUC21A0A140T8X8 626 aa7.46□□□□□ -1.22
SHKBP1-206ENST00000595523 RHODO00212 210 aa7.46□□□□□ -1.22
SHKBP1-206ENST00000595523 OR5AL1P0C617 328 aa7.46□□□□□ -1.22
SHKBP1-206ENST00000595523 GZMBP10144 247 aa7.46□□□□□ -1.22
SHKBP1-206ENST00000595523 TAGLN2P37802 199 aaKnown RBP7.46□□□□□ -1.22
SHKBP1-206ENST00000595523 LINC00315P59091 139 aa7.46□□□□□ -1.22
SHKBP1-206ENST00000595523 FAM74A4Q5TZK3 123 aa7.46□□□□□ -1.22
SHKBP1-206ENST00000595523 FAM210AQ96ND0 272 aa7.46□□□□□ -1.22
SHKBP1-206ENST00000595523 TNFRSF18Q9Y5U5 241 aa7.46□□□□□ -1.22
SHKBP1-206ENST00000595523 RYR1P21817 5038 aa7.46□□□□□ -1.22
SHKBP1-206ENST00000595523 GAGE12JA6NER3 117 aa7.45□□□□□ -1.22
SHKBP1-206ENST00000595523 RBFOX3A6NFN3 312 aa7.45□□□□□ -1.22
SHKBP1-206ENST00000595523 K7EN84 100 aa7.45□□□□□ -1.22
SHKBP1-206ENST00000595523 IGLC6P0CF74 106 aa7.45□□□□□ -1.22
SHKBP1-206ENST00000595523 DNAH10OSP0CZ25 163 aa7.45□□□□□ -1.22
SHKBP1-206ENST00000595523 GAGE1Q13065 139 aa7.45□□□□□ -1.22
SHKBP1-206ENST00000595523 GAGE4Q13068 117 aa7.45□□□□□ -1.22
SHKBP1-206ENST00000595523 GAGE5Q13069 117 aa7.45□□□□□ -1.22
SHKBP1-206ENST00000595523 GAGE13Q4V321 117 aa7.45□□□□□ -1.22
SHKBP1-206ENST00000595523 ATP6V0E2Q8NHE4 81 aa7.45□□□□□ -1.22
SHKBP1-206ENST00000595523 LY96Q9Y6Y9 160 aa7.45□□□□□ -1.22
SHKBP1-206ENST00000595523 BTF3P20290 206 aaKnown RBP7.44□□□□□ -1.22
SHKBP1-206ENST00000595523 OR2D3Q8NGH3 330 aa7.44□□□□□ -1.22
SHKBP1-206ENST00000595523 GTSF1LQ9H1H1 148 aa7.44□□□□□ -1.22
SHKBP1-206ENST00000595523 TMEM250H0YL14 139 aa7.43□□□□□ -1.22
SHKBP1-206ENST00000595523 TOR2AQ5JU69 321 aa7.43□□□□□ -1.22
SHKBP1-206ENST00000595523 LELP1Q5T871 98 aa7.43□□□□□ -1.22
SHKBP1-206ENST00000595523 OCC1Q8TAD7 63 aa7.43□□□□□ -1.22
SHKBP1-206ENST00000595523 KIF25-AS1Q9Y6Z4 181 aa7.43□□□□□ -1.22
SHKBP1-206ENST00000595523 IGHV3-38A0A0C4DH36 116 aa7.42□□□□□ -1.22
SHKBP1-206ENST00000595523 P01737 135 aa7.42□□□□□ -1.22
SHKBP1-206ENST00000595523 RPS20P60866 119 aaKnown RBP7.42□□□□□ -1.22
SHKBP1-206ENST00000595523 SSTP61278 116 aa7.42□□□□□ -1.22
SHKBP1-206ENST00000595523 LINC01556Q5JQF7 62 aa7.42□□□□□ -1.22
SHKBP1-206ENST00000595523 SPANXN1Q5VSR9 72 aa7.42□□□□□ -1.22
SHKBP1-206ENST00000595523 Q8N3U1 123 aa7.42□□□□□ -1.22
SHKBP1-206ENST00000595523 FER1L6-AS1Q8NA97 138 aa7.42□□□□□ -1.22
SHKBP1-206ENST00000595523 NUDT10Q8NFP7 164 aa7.42□□□□□ -1.22
SHKBP1-206ENST00000595523 DAZAP1Q96EP5 407 aaKnown RBP7.42□□□□□ -1.22
SHKBP1-206ENST00000595523 NUDT11Q96G61 164 aa7.42□□□□□ -1.22
SHKBP1-206ENST00000595523 RNASE7Q9H1E1 156 aaKnown RBP7.42□□□□□ -1.22
SHKBP1-206ENST00000595523 MSRB1Q9NZV6 116 aa7.42□□□□□ -1.22
SHKBP1-206ENST00000595523 APOBP04114 4563 aaKnown RBP7.41□□□□□ -1.22
SHKBP1-206ENST00000595523 K7EP13 123 aa7.41□□□□□ -1.22
SHKBP1-206ENST00000595523 EVI2AP22794 236 aa7.41□□□□□ -1.22
SHKBP1-206ENST00000595523 RAB4BP61018 213 aa7.41□□□□□ -1.22
SHKBP1-206ENST00000595523 OR10J3Q5JRS4 329 aa7.41□□□□□ -1.22
SHKBP1-206ENST00000595523 TPPP3Q9BW30 176 aa7.41□□□□□ -1.22
SHKBP1-206ENST00000595523 BIN3Q9NQY0 253 aa7.41□□□□□ -1.22
SHKBP1-206ENST00000595523 TRAV8-6A0A0B4J262 113 aa7.4□□□□□ -1.22
SHKBP1-206ENST00000595523 TRBV10-1A0A0K0K1A3 114 aa7.4□□□□□ -1.22
SHKBP1-206ENST00000595523 SRP19P09132 144 aaKnown RBP7.4□□□□□ -1.22
SHKBP1-206ENST00000595523 UBE2D3P61077 147 aa7.4□□□□□ -1.22
SHKBP1-206ENST00000595523 UBE2D2P62837 147 aa7.4□□□□□ -1.22
SHKBP1-206ENST00000595523 ZNF56Q15929 161 aa7.4□□□□□ -1.22
SHKBP1-206ENST00000595523 TEX261Q6UWH6 196 aa7.4□□□□□ -1.22
SHKBP1-206ENST00000595523 OR10G8Q8NGN5 311 aa7.4□□□□□ -1.22
SHKBP1-206ENST00000595523 EIF5A2Q9GZV4 153 aaKnown RBP7.4□□□□□ -1.22
SHKBP1-206ENST00000595523 TRBV7-3A0A075B6L6 115 aa7.39□□□□□ -1.23
SHKBP1-206ENST00000595523 TRAV9-2A0A087WT02 112 aa7.39□□□□□ -1.23
SHKBP1-206ENST00000595523 NDUFS6O75380 124 aaKnown RBP7.39□□□□□ -1.23
SHKBP1-206ENST00000595523 CTRLP40313 264 aa7.39□□□□□ -1.23
SHKBP1-206ENST00000595523 CEBPGP53567 150 aa7.39□□□□□ -1.23
SHKBP1-206ENST00000595523 KRTAP10-2P60368 255 aa7.39□□□□□ -1.23
SHKBP1-206ENST00000595523 LYZL1Q6UWQ5 148 aa7.39□□□□□ -1.23
SHKBP1-206ENST00000595523 C10orf126Q8N4M7 172 aa7.39□□□□□ -1.23
SHKBP1-206ENST00000595523 NEXN-AS1Q8NBZ9 246 aa7.39□□□□□ -1.23
SHKBP1-206ENST00000595523 AP1S3Q96PC3 154 aa7.39□□□□□ -1.23
SHKBP1-206ENST00000595523 RPP21Q9H633 154 aaKnown RBP7.39□□□□□ -1.23
SHKBP1-206ENST00000595523 HSPG2P98160 4391 aa7.38□□□□□ -1.23
SHKBP1-206ENST00000595523 XKRY2A2RUG3 117 aa7.38□□□□□ -1.23
SHKBP1-206ENST00000595523 IBA57-AS1B1ANH7 110 aa7.38□□□□□ -1.23
SHKBP1-206ENST00000595523 F2Z2F3 143 aa7.38□□□□□ -1.23
SHKBP1-206ENST00000595523 IGHV3-30P01768 117 aa7.38□□□□□ -1.23
SHKBP1-206ENST00000595523 IGHV3-33P01772 117 aa7.38□□□□□ -1.23
SHKBP1-206ENST00000595523 IGHV3-30-3P0DP02 117 aa7.38□□□□□ -1.23
SHKBP1-206ENST00000595523 IGHV3-30-5P0DP03 117 aa7.38□□□□□ -1.23
SHKBP1-206ENST00000595523 CACNG7P62955 275 aa7.38□□□□□ -1.23
SHKBP1-206ENST00000595523 RPL36AP83881 106 aaKnown RBP7.38□□□□□ -1.23
SHKBP1-206ENST00000595523 SPATA12Q7Z6I5 190 aa7.38□□□□□ -1.23
SHKBP1-206ENST00000595523 GTSF1Q8WW33 167 aa7.38□□□□□ -1.23
SHKBP1-206ENST00000595523 RPL36ALQ969Q0 106 aaKnown RBP7.38□□□□□ -1.23
SHKBP1-206ENST00000595523 CNFNQ9BYD5 112 aa7.38□□□□□ -1.23
SHKBP1-206ENST00000595523 A0A087WWC5 75 aa7.37□□□□□ -1.23
SHKBP1-206ENST00000595523 C9JQL5 133 aa7.37□□□□□ -1.23
SHKBP1-206ENST00000595523 NTF3P20783 257 aa7.37□□□□□ -1.23
SHKBP1-206ENST00000595523 SRSF3P84103 164 aaKnown RBP7.37□□□□□ -1.23
SHKBP1-206ENST00000595523 FAM231DQ6ZW35 169 aa7.37□□□□□ -1.23
SHKBP1-206ENST00000595523 LINC01551Q86U37 167 aa7.37□□□□□ -1.23
SHKBP1-206ENST00000595523 NFE4Q86UQ8 179 aa7.37□□□□□ -1.23
SHKBP1-206ENST00000595523 SMIM7Q9BQ49 75 aa7.37□□□□□ -1.23
SHKBP1-206ENST00000595523 F5H697 171 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms