RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 LINC00694P0DN24 101 aa15.75■□□□□ 0.11
LSM4-204ENST00000594828 C14orf178Q8N769 122 aaPredicted RBP15.75■□□□□ 0.11
LSM4-204ENST00000594828 Q9HAA7 133 aa15.75■□□□□ 0.11
LSM4-204ENST00000594828 Q9UF83 564 aa15.75■□□□□ 0.11
LSM4-204ENST00000594828 EIF5AP63241 154 aaKnown RBP15.74■□□□□ 0.11
LSM4-204ENST00000594828 FAM74A4Q5TZK3 123 aa15.74■□□□□ 0.11
LSM4-204ENST00000594828 SFRP2Q96HF1 295 aa15.74■□□□□ 0.11
LSM4-204ENST00000594828 M0R381 172 aa15.73■□□□□ 0.11
LSM4-204ENST00000594828 PFDN1O60925 122 aa15.73■□□□□ 0.11
LSM4-204ENST00000594828 H2AFB1P0C5Y9 115 aa15.73■□□□□ 0.11
LSM4-204ENST00000594828 A0A087WWL8 130 aa15.72■□□□□ 0.11
LSM4-204ENST00000594828 LRCOL1A6NCL2 159 aa15.72■□□□□ 0.11
LSM4-204ENST00000594828 ZFP82Q8N141 532 aa15.72■□□□□ 0.11
LSM4-204ENST00000594828 A0A087WWC5 75 aa15.71■□□□□ 0.11
LSM4-204ENST00000594828 SCO2A0A1W2PP80 73 aa15.71■□□□□ 0.11
LSM4-204ENST00000594828 KRTAP10-1P60331 282 aa15.71■□□□□ 0.11
LSM4-204ENST00000594828 TMUB2Q71RG4 321 aa15.71■□□□□ 0.11
LSM4-204ENST00000594828 LAGE3Q14657 143 aa15.7■□□□□ 0.1
LSM4-204ENST00000594828 BAGE2Q86Y30 109 aa15.7■□□□□ 0.1
LSM4-204ENST00000594828 GCSHP23434 173 aa15.69■□□□□ 0.1
LSM4-204ENST00000594828 Q8N3U1 123 aa15.69■□□□□ 0.1
LSM4-204ENST00000594828 MLST8Q9BVC4 326 aa15.69■□□□□ 0.1
LSM4-204ENST00000594828 XGP55808 180 aa15.68■□□□□ 0.1
LSM4-204ENST00000594828 TM2D2Q9BX73 214 aa15.68■□□□□ 0.1
LSM4-204ENST00000594828 RPL19P84098 196 aaKnown RBP15.67■□□□□ 0.1
LSM4-204ENST00000594828 IGLV5-52A0A0A0MRZ9 124 aa15.66■□□□□ 0.1
LSM4-204ENST00000594828 DAZ4Q86SG3 579 aaKnown RBP15.66■□□□□ 0.1
LSM4-204ENST00000594828 NTN5Q8WTR8 489 aaPredicted RBP15.66■□□□□ 0.1
LSM4-204ENST00000594828 DAZ3Q9NR90 486 aaKnown RBP15.66■□□□□ 0.1
LSM4-204ENST00000594828 TRAV8-3A0A0A6YYJ7 113 aa15.65■□□□□ 0.1
LSM4-204ENST00000594828 Q8N814 137 aa15.65■□□□□ 0.1
LSM4-204ENST00000594828 TRBV10-1A0A0K0K1A3 114 aa15.64■□□□□ 0.09
LSM4-204ENST00000594828 EPM2AB3EWF7 344 aa15.64■□□□□ 0.09
LSM4-204ENST00000594828 CXCL1P09341 107 aa15.64■□□□□ 0.09
LSM4-204ENST00000594828 CCL20P78556 96 aa15.64■□□□□ 0.09
LSM4-204ENST00000594828 TOR2AQ5JU69 321 aa15.64■□□□□ 0.09
LSM4-204ENST00000594828 PRR27Q6MZM9 219 aa15.64■□□□□ 0.09
LSM4-204ENST00000594828 RPL36AP83881 106 aaKnown RBP15.63■□□□□ 0.09
LSM4-204ENST00000594828 OR10AG1Q8NH19 301 aa15.63■□□□□ 0.09
LSM4-204ENST00000594828 RPL36ALQ969Q0 106 aaKnown RBP15.63■□□□□ 0.09
LSM4-204ENST00000594828 MANBALQ9NQG1 85 aa15.63■□□□□ 0.09
LSM4-204ENST00000594828 GNG13Q9P2W3 67 aa15.63■□□□□ 0.09
LSM4-204ENST00000594828 URGCP-MRPS24S4R325 110 aa15.63■□□□□ 0.09
LSM4-204ENST00000594828 RPL35P42766 123 aaKnown RBP15.62■□□□□ 0.09
LSM4-204ENST00000594828 RAB5CP51148 216 aa15.62■□□□□ 0.09
LSM4-204ENST00000594828 EIF5AL1Q6IS14 154 aaKnown RBP15.62■□□□□ 0.09
LSM4-204ENST00000594828 SSBP4Q9BWG4 385 aaPredicted RBP15.62■□□□□ 0.09
LSM4-204ENST00000594828 TRBV7-3A0A075B6L6 115 aa15.61■□□□□ 0.09
LSM4-204ENST00000594828 TRAV1-1A0A0B4J248 108 aa15.61■□□□□ 0.09
LSM4-204ENST00000594828 RAB4BP61018 213 aa15.61■□□□□ 0.09
LSM4-204ENST00000594828 NIT1Q86X76 327 aa15.61■□□□□ 0.09
LSM4-204ENST00000594828 SNAI2O43623 268 aa15.6■□□□□ 0.09
LSM4-204ENST00000594828 OR5AL1P0C617 328 aa15.6■□□□□ 0.09
LSM4-204ENST00000594828 UBE2D3P61077 147 aa15.6■□□□□ 0.09
LSM4-204ENST00000594828 UBE2D2P62837 147 aa15.6■□□□□ 0.09
LSM4-204ENST00000594828 MUC21A0A0G2JKD1 596 aa15.59■□□□□ 0.09
LSM4-204ENST00000594828 MUC21A0A140T8X8 626 aa15.59■□□□□ 0.09
LSM4-204ENST00000594828 TEX46H3BTG2 121 aa15.59■□□□□ 0.09
LSM4-204ENST00000594828 ZNF56Q15929 161 aa15.59■□□□□ 0.09
LSM4-204ENST00000594828 SPANXN1Q5VSR9 72 aa15.59■□□□□ 0.09
LSM4-204ENST00000594828 OR10G8Q8NGN5 311 aa15.59■□□□□ 0.09
LSM4-204ENST00000594828 C11orf52Q96A22 123 aa15.59■□□□□ 0.09
LSM4-204ENST00000594828 DERL1Q9BUN8 251 aa15.59■□□□□ 0.09
LSM4-204ENST00000594828 COX11Q9Y6N1 276 aa15.58■□□□□ 0.08
LSM4-204ENST00000594828 A0A087WX48 190 aa15.57■□□□□ 0.08
LSM4-204ENST00000594828 SSTP61278 116 aa15.57■□□□□ 0.08
LSM4-204ENST00000594828 SULT1A2P50226 295 aa15.56■□□□□ 0.08
LSM4-204ENST00000594828 WFDC2Q14508 124 aa15.56■□□□□ 0.08
LSM4-204ENST00000594828 KCNIP4Q6PIL6 250 aa15.56■□□□□ 0.08
LSM4-204ENST00000594828 FRZBQ92765 325 aa15.56■□□□□ 0.08
LSM4-204ENST00000594828 RMI2Q96E14 147 aa15.56■□□□□ 0.08
LSM4-204ENST00000594828 KLK12Q9UKR0 248 aa15.56■□□□□ 0.08
LSM4-204ENST00000594828 F5H697 171 aa15.55■□□□□ 0.08
LSM4-204ENST00000594828 ELOBQ15370 118 aa15.55■□□□□ 0.08
LSM4-204ENST00000594828 CENPWQ5EE01 88 aa15.55■□□□□ 0.08
LSM4-204ENST00000594828 TCTE3Q8IZS6 198 aa15.55■□□□□ 0.08
LSM4-204ENST00000594828 NEXN-AS1Q8NBZ9 246 aa15.55■□□□□ 0.08
LSM4-204ENST00000594828 DAZAP1Q96EP5 407 aaKnown RBP15.55■□□□□ 0.08
LSM4-204ENST00000594828 TMEM70Q9BUB7 260 aa15.55■□□□□ 0.08
LSM4-204ENST00000594828 CHCHD7Q9BUK0 85 aa15.55■□□□□ 0.08
LSM4-204ENST00000594828 LECT2O14960 151 aa15.54■□□□□ 0.08
LSM4-204ENST00000594828 SMR3BP02814 79 aaPredicted RBP15.53■□□□□ 0.08
LSM4-204ENST00000594828 SMIM17P0DL12 118 aa15.53■□□□□ 0.08
LSM4-204ENST00000594828 Q5VSD8 79 aa15.53■□□□□ 0.08
LSM4-204ENST00000594828 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.53■□□□□ 0.08
LSM4-204ENST00000594828 BAALCQ8WXS3 180 aa15.53■□□□□ 0.08
LSM4-204ENST00000594828 DNAJC30Q96LL9 226 aa15.53■□□□□ 0.08
LSM4-204ENST00000594828 IGKV2D-24A0A075B6R9 120 aa15.52■□□□□ 0.08
LSM4-204ENST00000594828 TRBV6-8A0A0A6YYG3 113 aa15.52■□□□□ 0.08
LSM4-204ENST00000594828 RAB19A4D1S5 217 aa15.52■□□□□ 0.08
LSM4-204ENST00000594828 TMEM262E9PQX1 116 aa15.52■□□□□ 0.08
LSM4-204ENST00000594828 IGLV2-8P01709 118 aa15.52■□□□□ 0.08
LSM4-204ENST00000594828 HAMPP81172 84 aa15.52■□□□□ 0.08
LSM4-204ENST00000594828 MEF2BQ02080 365 aaPredicted RBP15.52■□□□□ 0.08
LSM4-204ENST00000594828 UBE2WQ96B02 151 aa15.52■□□□□ 0.08
LSM4-204ENST00000594828 PDE6DO43924 150 aa15.51■□□□□ 0.07
LSM4-204ENST00000594828 IFNA1P01562 189 aa15.51■□□□□ 0.07
LSM4-204ENST00000594828 GNG4P50150 75 aa15.51■□□□□ 0.07
LSM4-204ENST00000594828 RPS20P60866 119 aaKnown RBP15.51■□□□□ 0.07
LSM4-204ENST00000594828 SLC51BQ86UW2 128 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 102.9 ms