RNA–Protein interactions for RNA: ENST00000594724.5

USE1-205, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 3

Gene USE1, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-205ENST00000594724 GTSF1LQ9H1H1 148 aa9.99□□□□□ -0.81
USE1-205ENST00000594724 TRAV8-6A0A0B4J262 113 aa9.98□□□□□ -0.81
USE1-205ENST00000594724 MUC21A0A0G2JKD1 596 aa9.98□□□□□ -0.81
USE1-205ENST00000594724 MUC21A0A140T8X8 626 aa9.98□□□□□ -0.81
USE1-205ENST00000594724 RHODO00212 210 aa9.98□□□□□ -0.81
USE1-205ENST00000594724 KRTAP10-2P60368 255 aa9.98□□□□□ -0.81
USE1-205ENST00000594724 MSRB1Q9NZV6 116 aa9.98□□□□□ -0.81
USE1-205ENST00000594724 A0A1B0GVG6 124 aa9.97□□□□□ -0.81
USE1-205ENST00000594724 IFNA1P01562 189 aa9.97□□□□□ -0.81
USE1-205ENST00000594724 IGLV2-8P01709 118 aa9.97□□□□□ -0.81
USE1-205ENST00000594724 SSTP61278 116 aa9.97□□□□□ -0.81
USE1-205ENST00000594724 MEF2BQ02080 365 aaPredicted RBP9.97□□□□□ -0.81
USE1-205ENST00000594724 CENPWQ5EE01 88 aa9.97□□□□□ -0.81
USE1-205ENST00000594724 LELP1Q5T871 98 aa9.97□□□□□ -0.81
USE1-205ENST00000594724 OR10AG1Q8NH19 301 aa9.97□□□□□ -0.81
USE1-205ENST00000594724 K7EP13 123 aa9.96□□□□□ -0.82
USE1-205ENST00000594724 PDE6DO43924 150 aa9.96□□□□□ -0.82
USE1-205ENST00000594724 IGHV3-30P01768 117 aa9.96□□□□□ -0.82
USE1-205ENST00000594724 IGHV3-33P01772 117 aa9.96□□□□□ -0.82
USE1-205ENST00000594724 CXCL1P09341 107 aa9.96□□□□□ -0.82
USE1-205ENST00000594724 LINC00694P0DN24 101 aa9.96□□□□□ -0.82
USE1-205ENST00000594724 IGHV3-30-3P0DP02 117 aa9.96□□□□□ -0.82
USE1-205ENST00000594724 IGHV3-30-5P0DP03 117 aa9.96□□□□□ -0.82
USE1-205ENST00000594724 BCL2P10415 239 aa9.96□□□□□ -0.82
USE1-205ENST00000594724 LINC01556Q5JQF7 62 aa9.96□□□□□ -0.82
USE1-205ENST00000594724 ALKAL2Q6UX46 152 aa9.96□□□□□ -0.82
USE1-205ENST00000594724 NFE4Q86UQ8 179 aa9.96□□□□□ -0.82
USE1-205ENST00000594724 MED9Q9NWA0 146 aa9.96□□□□□ -0.82
USE1-205ENST00000594724 SNAI2O43623 268 aa9.95□□□□□ -0.82
USE1-205ENST00000594724 GNG4P50150 75 aa9.95□□□□□ -0.82
USE1-205ENST00000594724 C10orf126Q8N4M7 172 aa9.95□□□□□ -0.82
USE1-205ENST00000594724 SSBP4Q9BWG4 385 aaPredicted RBP9.95□□□□□ -0.82
USE1-205ENST00000594724 VAX2Q9UIW0 290 aa9.95□□□□□ -0.82
USE1-205ENST00000594724 OR5AL1P0C617 328 aa9.94□□□□□ -0.82
USE1-205ENST00000594724 GZMBP10144 247 aa9.94□□□□□ -0.82
USE1-205ENST00000594724 FUSP35637 526 aaKnown RBP eCLIP9.94□□□□□ -0.82
USE1-205ENST00000594724 NKX2-5P52952 324 aaPredicted RBP9.94□□□□□ -0.82
USE1-205ENST00000594724 SPANXN1Q5VSR9 72 aa9.94□□□□□ -0.82
USE1-205ENST00000594724 Q8N3U1 123 aa9.94□□□□□ -0.82
USE1-205ENST00000594724 DAZAP1Q96EP5 407 aaKnown RBP9.94□□□□□ -0.82
USE1-205ENST00000594724 TRBV20OR9-2A0A075B6H5 130 aa9.93□□□□□ -0.82
USE1-205ENST00000594724 IBA57-AS1B1ANH7 110 aa9.93□□□□□ -0.82
USE1-205ENST00000594724 ERVFC1-1P60608 527 aa9.93□□□□□ -0.82
USE1-205ENST00000594724 OR2D3Q8NGH3 330 aa9.93□□□□□ -0.82
USE1-205ENST00000594724 BOLA1Q9Y3E2 137 aa9.93□□□□□ -0.82
USE1-205ENST00000594724 LRP1BQ9NZR2 4599 aa9.93□□□□□ -0.82
USE1-205ENST00000594724 C19orf71A6NCJ1 209 aa9.92□□□□□ -0.82
USE1-205ENST00000594724 RBFOX3A6NFN3 312 aa9.92□□□□□ -0.82
USE1-205ENST00000594724 Q9HAA7 133 aa9.92□□□□□ -0.82
USE1-205ENST00000594724 A0A087WTM6 91 aa9.91□□□□□ -0.82
USE1-205ENST00000594724 EREGO14944 169 aa9.91□□□□□ -0.82
USE1-205ENST00000594724 BLOC1S1P78537 153 aa9.91□□□□□ -0.82
USE1-205ENST00000594724 ZNF56Q15929 161 aa9.91□□□□□ -0.82
USE1-205ENST00000594724 SMIM12Q96EX1 92 aa9.91□□□□□ -0.82
USE1-205ENST00000594724 TPPP3Q9BW30 176 aa9.91□□□□□ -0.82
USE1-205ENST00000594724 A0A087WWC5 75 aa9.9□□□□□ -0.82
USE1-205ENST00000594724 TRBV10-1A0A0K0K1A3 114 aa9.9□□□□□ -0.82
USE1-205ENST00000594724 F5H697 171 aa9.9□□□□□ -0.82
USE1-205ENST00000594724 P01737 135 aa9.9□□□□□ -0.82
USE1-205ENST00000594724 IGLC6P0CF74 106 aa9.9□□□□□ -0.82
USE1-205ENST00000594724 TAGLN2P37802 199 aaKnown RBP9.9□□□□□ -0.82
USE1-205ENST00000594724 RAB4BP61018 213 aa9.9□□□□□ -0.82
USE1-205ENST00000594724 RPL36AP83881 106 aaKnown RBP9.9□□□□□ -0.82
USE1-205ENST00000594724 FER1L6-AS1Q8NA97 138 aa9.9□□□□□ -0.82
USE1-205ENST00000594724 RPL36ALQ969Q0 106 aaKnown RBP9.9□□□□□ -0.82
USE1-205ENST00000594724 TRBV7-3A0A075B6L6 115 aa9.89□□□□□ -0.83
USE1-205ENST00000594724 RPS20P60866 119 aaKnown RBP9.89□□□□□ -0.83
USE1-205ENST00000594724 UBE2D3P61077 147 aa9.89□□□□□ -0.83
USE1-205ENST00000594724 UBE2D2P62837 147 aa9.89□□□□□ -0.83
USE1-205ENST00000594724 DAZ4Q86SG3 579 aaKnown RBP9.89□□□□□ -0.83
USE1-205ENST00000594724 NEXN-AS1Q8NBZ9 246 aa9.89□□□□□ -0.83
USE1-205ENST00000594724 DAZ3Q9NR90 486 aaKnown RBP9.89□□□□□ -0.83
USE1-205ENST00000594724 PGPEP1Q9NXJ5 209 aa9.89□□□□□ -0.83
USE1-205ENST00000594724 PSCAO43653 123 aa9.88□□□□□ -0.83
USE1-205ENST00000594724 NUDT10Q8NFP7 164 aa9.88□□□□□ -0.83
USE1-205ENST00000594724 LYPD6BQ8NI32 183 aa9.88□□□□□ -0.83
USE1-205ENST00000594724 OCC1Q8TAD7 63 aa9.88□□□□□ -0.83
USE1-205ENST00000594724 NUDT11Q96G61 164 aa9.88□□□□□ -0.83
USE1-205ENST00000594724 BIN3Q9NQY0 253 aa9.88□□□□□ -0.83
USE1-205ENST00000594724 KIF25-AS1Q9Y6Z4 181 aa9.88□□□□□ -0.83
USE1-205ENST00000594724 DNAH5Q8TE73 4624 aa9.87□□□□□ -0.83
USE1-205ENST00000594724 XKRY2A2RUG3 117 aa9.87□□□□□ -0.83
USE1-205ENST00000594724 K7EN84 100 aa9.87□□□□□ -0.83
USE1-205ENST00000594724 CDK2AP2O75956 126 aa9.87□□□□□ -0.83
USE1-205ENST00000594724 SMIM17P0DL12 118 aa9.87□□□□□ -0.83
USE1-205ENST00000594724 LYZL1Q6UWQ5 148 aa9.87□□□□□ -0.83
USE1-205ENST00000594724 OR10G8Q8NGN5 311 aa9.87□□□□□ -0.83
USE1-205ENST00000594724 AP1S3Q96PC3 154 aa9.87□□□□□ -0.83
USE1-205ENST00000594724 KRTAP17-1Q9BYP8 105 aa9.87□□□□□ -0.83
USE1-205ENST00000594724 RYR1P21817 5038 aa9.87□□□□□ -0.83
USE1-205ENST00000594724 NIT1Q86X76 327 aa9.86□□□□□ -0.83
USE1-205ENST00000594724 RNASE7Q9H1E1 156 aaKnown RBP9.86□□□□□ -0.83
USE1-205ENST00000594724 HSPG2P98160 4391 aa9.86□□□□□ -0.83
USE1-205ENST00000594724 LRCOL1A6NCL2 159 aa9.85□□□□□ -0.83
USE1-205ENST00000594724 F2Z2F3 143 aa9.85□□□□□ -0.83
USE1-205ENST00000594724 MGPP08493 103 aa9.85□□□□□ -0.83
USE1-205ENST00000594724 CEBPGP53567 150 aa9.85□□□□□ -0.83
USE1-205ENST00000594724 CACNG7P62955 275 aa9.85□□□□□ -0.83
USE1-205ENST00000594724 TOR2AQ5JU69 321 aa9.85□□□□□ -0.83
USE1-205ENST00000594724 APOBP04114 4563 aaKnown RBP9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms