RNA–Protein interactions for RNA: ENST00000594090.5

VRK3-206, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best)

Gene VRK3, Length 1,448 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-206ENST00000594090 IGLC6P0CF74 106 aa9.98□□□□□ -0.81
VRK3-206ENST00000594090 C1orf134Q5TEV5 83 aa9.98□□□□□ -0.81
VRK3-206ENST00000594090 SPANXN1Q5VSR9 72 aa9.98□□□□□ -0.81
VRK3-206ENST00000594090 LINC00336Q6ZUF6 198 aa9.98□□□□□ -0.81
VRK3-206ENST00000594090 C14orf178Q8N769 122 aaPredicted RBP9.98□□□□□ -0.81
VRK3-206ENST00000594090 FER1L6-AS1Q8NA97 138 aa9.98□□□□□ -0.81
VRK3-206ENST00000594090 KRTAP1-5Q9BYS1 174 aa9.98□□□□□ -0.81
VRK3-206ENST00000594090 DNAH2Q9P225 4427 aa9.97□□□□□ -0.81
VRK3-206ENST00000594090 XKRY2A2RUG3 117 aa9.97□□□□□ -0.81
VRK3-206ENST00000594090 SRP19P09132 144 aaKnown RBP9.97□□□□□ -0.81
VRK3-206ENST00000594090 NUDT10Q8NFP7 164 aa9.97□□□□□ -0.81
VRK3-206ENST00000594090 NUDT11Q96G61 164 aa9.97□□□□□ -0.81
VRK3-206ENST00000594090 A0A1W2PPQ1 181 aa9.96□□□□□ -0.82
VRK3-206ENST00000594090 LINC00694P0DN24 101 aa9.96□□□□□ -0.82
VRK3-206ENST00000594090 TIRAPP58753 221 aa9.96□□□□□ -0.82
VRK3-206ENST00000594090 SOHLH1Q5JUK2 328 aa9.96□□□□□ -0.82
VRK3-206ENST00000594090 SMIM7Q9BQ49 75 aa9.96□□□□□ -0.82
VRK3-206ENST00000594090 TPPP3Q9BW30 176 aa9.96□□□□□ -0.82
VRK3-206ENST00000594090 RNASE7Q9H1E1 156 aaKnown RBP9.96□□□□□ -0.82
VRK3-206ENST00000594090 EPPK1P58107 5090 aaKnown RBP9.95□□□□□ -0.82
VRK3-206ENST00000594090 GAGE12JA6NER3 117 aa9.95□□□□□ -0.82
VRK3-206ENST00000594090 SSTP61278 116 aa9.95□□□□□ -0.82
VRK3-206ENST00000594090 GAGE1Q13065 139 aa9.95□□□□□ -0.82
VRK3-206ENST00000594090 GAGE4Q13068 117 aa9.95□□□□□ -0.82
VRK3-206ENST00000594090 GAGE5Q13069 117 aa9.95□□□□□ -0.82
VRK3-206ENST00000594090 GAGE13Q4V321 117 aa9.95□□□□□ -0.82
VRK3-206ENST00000594090 WFDC10BQ8IUB3 73 aa9.95□□□□□ -0.82
VRK3-206ENST00000594090 C6orf223Q8N319 242 aa9.95□□□□□ -0.82
VRK3-206ENST00000594090 AP1S3Q96PC3 154 aa9.95□□□□□ -0.82
VRK3-206ENST00000594090 RPP21Q9H633 154 aaKnown RBP9.95□□□□□ -0.82
VRK3-206ENST00000594090 Q9UF83 564 aa9.95□□□□□ -0.82
VRK3-206ENST00000594090 LY96Q9Y6Y9 160 aa9.95□□□□□ -0.82
VRK3-206ENST00000594090 PRSS29PA6NIE9 313 aa9.94□□□□□ -0.82
VRK3-206ENST00000594090 ZNF727A8MUV8 499 aa9.94□□□□□ -0.82
VRK3-206ENST00000594090 ATP6V0E2Q8NHE4 81 aa9.94□□□□□ -0.82
VRK3-206ENST00000594090 F2Z2F3 143 aa9.93□□□□□ -0.82
VRK3-206ENST00000594090 CTRLP40313 264 aa9.93□□□□□ -0.82
VRK3-206ENST00000594090 CACNG7P62955 275 aa9.93□□□□□ -0.82
VRK3-206ENST00000594090 ZNF56Q15929 161 aa9.93□□□□□ -0.82
VRK3-206ENST00000594090 FAM231DQ6ZW35 169 aa9.93□□□□□ -0.82
VRK3-206ENST00000594090 GTSF1LQ9H1H1 148 aa9.93□□□□□ -0.82
VRK3-206ENST00000594090 FAT2Q9NYQ8 4349 aa9.92□□□□□ -0.82
VRK3-206ENST00000594090 TRBV10-1A0A0K0K1A3 114 aa9.92□□□□□ -0.82
VRK3-206ENST00000594090 RAB4BP61018 213 aa9.92□□□□□ -0.82
VRK3-206ENST00000594090 LYZL1Q6UWQ5 148 aa9.92□□□□□ -0.82
VRK3-206ENST00000594090 LINC01551Q86U37 167 aa9.92□□□□□ -0.82
VRK3-206ENST00000594090 C9JQL5 133 aa9.91□□□□□ -0.82
VRK3-206ENST00000594090 GATCO43716 136 aaKnown RBP9.91□□□□□ -0.82
VRK3-206ENST00000594090 DNAH10OSP0CZ25 163 aa9.91□□□□□ -0.82
VRK3-206ENST00000594090 SMIM17P0DL12 118 aa9.91□□□□□ -0.82
VRK3-206ENST00000594090 LELP1Q5T871 98 aa9.91□□□□□ -0.82
VRK3-206ENST00000594090 MSRB1Q9NZV6 116 aa9.91□□□□□ -0.82
VRK3-206ENST00000594090 KIF25-AS1Q9Y6Z4 181 aa9.91□□□□□ -0.82
VRK3-206ENST00000594090 A0A1B0GVY2 172 aa9.9□□□□□ -0.82
VRK3-206ENST00000594090 BTF3P20290 206 aaKnown RBP9.9□□□□□ -0.82
VRK3-206ENST00000594090 ERVFC1-1P60608 527 aa9.9□□□□□ -0.82
VRK3-206ENST00000594090 SRSF3P84103 164 aaKnown RBP9.9□□□□□ -0.82
VRK3-206ENST00000594090 PEA15Q15121 130 aa9.9□□□□□ -0.82
VRK3-206ENST00000594090 OR10J3Q5JRS4 329 aa9.9□□□□□ -0.82
VRK3-206ENST00000594090 CNFNQ9BYD5 112 aa9.9□□□□□ -0.82
VRK3-206ENST00000594090 SMDT1Q9H4I9 107 aa9.9□□□□□ -0.82
VRK3-206ENST00000594090 TRAV8-6A0A0B4J262 113 aa9.9□□□□□ -0.83
VRK3-206ENST00000594090 IGHV3-38A0A0C4DH36 116 aa9.9□□□□□ -0.83
VRK3-206ENST00000594090 LINC00315P59091 139 aa9.9□□□□□ -0.83
VRK3-206ENST00000594090 RPL36AP83881 106 aaKnown RBP9.9□□□□□ -0.83
VRK3-206ENST00000594090 FAM74A3Q4VXF1 159 aa9.9□□□□□ -0.83
VRK3-206ENST00000594090 GTSF1Q8WW33 167 aa9.9□□□□□ -0.83
VRK3-206ENST00000594090 RPL36ALQ969Q0 106 aaKnown RBP9.9□□□□□ -0.83
VRK3-206ENST00000594090 DNAH17Q9UFH2 4485 aa9.89□□□□□ -0.83
VRK3-206ENST00000594090 TRBV7-3A0A075B6L6 115 aa9.89□□□□□ -0.83
VRK3-206ENST00000594090 TRAV9-2A0A087WT02 112 aa9.89□□□□□ -0.83
VRK3-206ENST00000594090 F5H697 171 aa9.89□□□□□ -0.83
VRK3-206ENST00000594090 K7EP13 123 aa9.89□□□□□ -0.83
VRK3-206ENST00000594090 MGPP08493 103 aa9.89□□□□□ -0.83
VRK3-206ENST00000594090 TRGC1P0CF51 173 aa9.89□□□□□ -0.83
VRK3-206ENST00000594090 NTF3P20783 257 aa9.89□□□□□ -0.83
VRK3-206ENST00000594090 EVI2AP22794 236 aa9.89□□□□□ -0.83
VRK3-206ENST00000594090 CT83Q5H943 113 aa9.89□□□□□ -0.83
VRK3-206ENST00000594090 WDR73Q6P4I2 378 aa9.89□□□□□ -0.83
VRK3-206ENST00000594090 A8MWL6 223 aa9.88□□□□□ -0.83
VRK3-206ENST00000594090 UBE2D3P61077 147 aa9.88□□□□□ -0.83
VRK3-206ENST00000594090 UBE2D2P62837 147 aa9.88□□□□□ -0.83
VRK3-206ENST00000594090 TNP2Q05952 138 aa9.88□□□□□ -0.83
VRK3-206ENST00000594090 TMEM241Q24JQ0 296 aa9.88□□□□□ -0.83
VRK3-206ENST00000594090 LINC01556Q5JQF7 62 aa9.88□□□□□ -0.83
VRK3-206ENST00000594090 NEXN-AS1Q8NBZ9 246 aa9.88□□□□□ -0.83
VRK3-206ENST00000594090 OR10G8Q8NGN5 311 aa9.88□□□□□ -0.83
VRK3-206ENST00000594090 OSTCQ9NRP0 149 aa9.88□□□□□ -0.83
VRK3-206ENST00000594090 A0A087WWC5 75 aa9.87□□□□□ -0.83
VRK3-206ENST00000594090 RPL23P62829 140 aaKnown RBP9.87□□□□□ -0.83
VRK3-206ENST00000594090 ISOC2Q96AB3 205 aa9.87□□□□□ -0.83
VRK3-206ENST00000594090 HECTD4Q9Y4D8 3996 aa9.87□□□□□ -0.83
VRK3-206ENST00000594090 RAB14P61106 215 aa9.86□□□□□ -0.83
VRK3-206ENST00000594090 TWIST1Q15672 202 aa9.86□□□□□ -0.83
VRK3-206ENST00000594090 SUMO4Q6EEV6 95 aa9.86□□□□□ -0.83
VRK3-206ENST00000594090 Q6ZRN7 208 aaPredicted RBP9.86□□□□□ -0.83
VRK3-206ENST00000594090 C10orf126Q8N4M7 172 aa9.86□□□□□ -0.83
VRK3-206ENST00000594090 DPH3P1Q9H4G8 78 aa9.86□□□□□ -0.83
VRK3-206ENST00000594090 NAT8Q9UHE5 227 aa9.86□□□□□ -0.83
VRK3-206ENST00000594090 ADIRFQ15847 76 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms