RNA–Protein interactions for RNA: ENST00000593827.1

COPE-204, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 3

Gene COPE, Length 601 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-204ENST00000593827 UFSP1Q6NVU6 142 aa13.66□□□□□ -0.22
COPE-204ENST00000593827 MED9Q9NWA0 146 aa13.66□□□□□ -0.22
COPE-204ENST00000593827 MSRB1Q9NZV6 116 aa13.66□□□□□ -0.22
COPE-204ENST00000593827 A0A087WWC5 75 aa13.65□□□□□ -0.22
COPE-204ENST00000593827 XKRY2A2RUG3 117 aa13.65□□□□□ -0.22
COPE-204ENST00000593827 C16orf90A8MZG2 172 aa13.65□□□□□ -0.22
COPE-204ENST00000593827 OR5AL1P0C617 328 aa13.65□□□□□ -0.22
COPE-204ENST00000593827 RPS20P60866 119 aaKnown RBP13.65□□□□□ -0.22
COPE-204ENST00000593827 LINC01556Q5JQF7 62 aa13.65□□□□□ -0.22
COPE-204ENST00000593827 JPT2Q9H910 190 aa13.65□□□□□ -0.22
COPE-204ENST00000593827 PKHD1P08F94 4074 aa13.64□□□□□ -0.23
COPE-204ENST00000593827 TRBV10-1A0A0K0K1A3 114 aa13.64□□□□□ -0.23
COPE-204ENST00000593827 GAGE12JA6NER3 117 aa13.64□□□□□ -0.23
COPE-204ENST00000593827 GAGE1Q13065 139 aa13.64□□□□□ -0.23
COPE-204ENST00000593827 GAGE4Q13068 117 aa13.64□□□□□ -0.23
COPE-204ENST00000593827 GAGE5Q13069 117 aa13.64□□□□□ -0.23
COPE-204ENST00000593827 GAGE13Q4V321 117 aa13.64□□□□□ -0.23
COPE-204ENST00000593827 SPANXN1Q5VSR9 72 aa13.64□□□□□ -0.23
COPE-204ENST00000593827 DERL1Q9BUN8 251 aa13.64□□□□□ -0.23
COPE-204ENST00000593827 SAMD10Q9BYL1 202 aa13.64□□□□□ -0.23
COPE-204ENST00000593827 A0A087WWL8 130 aa13.63□□□□□ -0.23
COPE-204ENST00000593827 SNAI2O43623 268 aa13.63□□□□□ -0.23
COPE-204ENST00000593827 ERVFC1-1P60608 527 aa13.63□□□□□ -0.23
COPE-204ENST00000593827 Q6ZSN1 163 aa13.63□□□□□ -0.23
COPE-204ENST00000593827 RPL19P84098 196 aaKnown RBP13.62□□□□□ -0.23
COPE-204ENST00000593827 ZNF575Q86XF7 245 aa13.62□□□□□ -0.23
COPE-204ENST00000593827 SSBP4Q9BWG4 385 aaPredicted RBP13.62□□□□□ -0.23
COPE-204ENST00000593827 SMIM17P0DL12 118 aa13.61□□□□□ -0.23
COPE-204ENST00000593827 RPL36AP83881 106 aaKnown RBP13.61□□□□□ -0.23
COPE-204ENST00000593827 Q6ZRN7 208 aaPredicted RBP13.61□□□□□ -0.23
COPE-204ENST00000593827 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.61□□□□□ -0.23
COPE-204ENST00000593827 RPL36ALQ969Q0 106 aaKnown RBP13.61□□□□□ -0.23
COPE-204ENST00000593827 P01737 135 aa13.6□□□□□ -0.23
COPE-204ENST00000593827 LINC00694P0DN24 101 aa13.6□□□□□ -0.23
COPE-204ENST00000593827 RAB4BP61018 213 aa13.6□□□□□ -0.23
COPE-204ENST00000593827 KIAA1109Q2LD37 5005 aa13.6□□□□□ -0.23
COPE-204ENST00000593827 ALKAL2Q6UX46 152 aa13.6□□□□□ -0.23
COPE-204ENST00000593827 SPATA12Q7Z6I5 190 aa13.6□□□□□ -0.23
COPE-204ENST00000593827 C14orf178Q8N769 122 aaPredicted RBP13.6□□□□□ -0.23
COPE-204ENST00000593827 OR2D3Q8NGH3 330 aa13.6□□□□□ -0.23
COPE-204ENST00000593827 OR10AG1Q8NH19 301 aa13.6□□□□□ -0.23
COPE-204ENST00000593827 PKD1P98161 4303 aa13.6□□□□□ -0.23
COPE-204ENST00000593827 AP1S3Q96PC3 154 aa13.59□□□□□ -0.23
COPE-204ENST00000593827 RAB19A4D1S5 217 aa13.58□□□□□ -0.24
COPE-204ENST00000593827 ZNF56Q15929 161 aa13.58□□□□□ -0.24
COPE-204ENST00000593827 FER1L6-AS1Q8NA97 138 aa13.58□□□□□ -0.24
COPE-204ENST00000593827 IBA57-AS1B1ANH7 110 aa13.57□□□□□ -0.24
COPE-204ENST00000593827 F2Z2F3 143 aa13.57□□□□□ -0.24
COPE-204ENST00000593827 IGLV2-8P01709 118 aa13.57□□□□□ -0.24
COPE-204ENST00000593827 CACNG7P62955 275 aa13.57□□□□□ -0.24
COPE-204ENST00000593827 TOR2AQ5JU69 321 aa13.57□□□□□ -0.24
COPE-204ENST00000593827 PGPEP1Q9NXJ5 209 aa13.57□□□□□ -0.24
COPE-204ENST00000593827 URGCP-MRPS24S4R325 110 aa13.57□□□□□ -0.24
COPE-204ENST00000593827 DNAH11Q96DT5 4516 aa13.56□□□□□ -0.24
COPE-204ENST00000593827 TRBV7-3A0A075B6L6 115 aa13.56□□□□□ -0.24
COPE-204ENST00000593827 C19orf71A6NCJ1 209 aa13.56□□□□□ -0.24
COPE-204ENST00000593827 TMEM250H0YL14 139 aa13.56□□□□□ -0.24
COPE-204ENST00000593827 PSCAO43653 123 aa13.56□□□□□ -0.24
COPE-204ENST00000593827 LAGE3Q14657 143 aa13.56□□□□□ -0.24
COPE-204ENST00000593827 KCNIP4Q6PIL6 250 aa13.56□□□□□ -0.24
COPE-204ENST00000593827 TPPP3Q9BW30 176 aa13.56□□□□□ -0.24
COPE-204ENST00000593827 RBFOX3A6NFN3 312 aa13.55□□□□□ -0.24
COPE-204ENST00000593827 F5H697 171 aa13.55□□□□□ -0.24
COPE-204ENST00000593827 OR10G8Q8NGN5 311 aa13.55□□□□□ -0.24
COPE-204ENST00000593827 TNFRSF18Q9Y5U5 241 aa13.55□□□□□ -0.24
COPE-204ENST00000593827 IGHV3-30P01768 117 aa13.54□□□□□ -0.24
COPE-204ENST00000593827 IGHV3-33P01772 117 aa13.54□□□□□ -0.24
COPE-204ENST00000593827 IGHV3-30-3P0DP02 117 aa13.54□□□□□ -0.24
COPE-204ENST00000593827 IGHV3-30-5P0DP03 117 aa13.54□□□□□ -0.24
COPE-204ENST00000593827 CDPF1Q6NVV7 123 aa13.54□□□□□ -0.24
COPE-204ENST00000593827 LYPD6BQ8NI32 183 aa13.54□□□□□ -0.24
COPE-204ENST00000593827 TM2D2Q9BX73 214 aa13.54□□□□□ -0.24
COPE-204ENST00000593827 TRBV20OR9-2A0A075B6H5 130 aa13.53□□□□□ -0.24
COPE-204ENST00000593827 TRAV8-3A0A0A6YYJ7 113 aa13.52□□□□□ -0.25
COPE-204ENST00000593827 MUC21A0A0G2JKD1 596 aa13.52□□□□□ -0.25
COPE-204ENST00000593827 MUC21A0A140T8X8 626 aa13.52□□□□□ -0.25
COPE-204ENST00000593827 H7C1H1 209 aa13.52□□□□□ -0.25
COPE-204ENST00000593827 NDUFS6O75380 124 aaKnown RBP13.52□□□□□ -0.25
COPE-204ENST00000593827 CDK2AP2O75956 126 aa13.52□□□□□ -0.25
COPE-204ENST00000593827 TRGC1P0CF51 173 aa13.52□□□□□ -0.25
COPE-204ENST00000593827 IGLC6P0CF74 106 aa13.52□□□□□ -0.25
COPE-204ENST00000593827 UBE2D3P61077 147 aa13.52□□□□□ -0.25
COPE-204ENST00000593827 SSTP61278 116 aa13.52□□□□□ -0.25
COPE-204ENST00000593827 UBE2D2P62837 147 aa13.52□□□□□ -0.25
COPE-204ENST00000593827 TMEM97Q5BJF2 176 aa13.52□□□□□ -0.25
COPE-204ENST00000593827 CHCHD7Q9BUK0 85 aa13.52□□□□□ -0.25
COPE-204ENST00000593827 DYNC1H1Q14204 4646 aaKnown RBP13.52□□□□□ -0.25
COPE-204ENST00000593827 A0A087WTM6 91 aa13.51□□□□□ -0.25
COPE-204ENST00000593827 NKX2-5P52952 324 aaPredicted RBP13.51□□□□□ -0.25
COPE-204ENST00000593827 PKIAP61925 76 aa13.51□□□□□ -0.25
COPE-204ENST00000593827 ELOBQ15370 118 aa13.51□□□□□ -0.25
COPE-204ENST00000593827 EIF5A2Q9GZV4 153 aaKnown RBP13.51□□□□□ -0.25
COPE-204ENST00000593827 Q9HAA7 133 aa13.51□□□□□ -0.25
COPE-204ENST00000593827 Q9UF83 564 aa13.51□□□□□ -0.25
COPE-204ENST00000593827 A0A087WX48 190 aa13.5□□□□□ -0.25
COPE-204ENST00000593827 GZMBP10144 247 aa13.5□□□□□ -0.25
COPE-204ENST00000593827 WDR73Q6P4I2 378 aa13.5□□□□□ -0.25
COPE-204ENST00000593827 RPP21Q9H633 154 aaKnown RBP13.5□□□□□ -0.25
COPE-204ENST00000593827 COX11Q9Y6N1 276 aa13.5□□□□□ -0.25
COPE-204ENST00000593827 A0A1B0GVG6 124 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms