RNA–Protein interactions for RNA: ENST00000593026.1

DDX39A-221, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 657 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-221ENST00000593026 A0A096LPF7 62 aa10.38□□□□□ -0.75
DDX39A-221ENST00000593026 TRBV6-4A0A1B0GX49 114 aa10.38□□□□□ -0.75
DDX39A-221ENST00000593026 CRYGDP07320 174 aa10.38□□□□□ -0.75
DDX39A-221ENST00000593026 GYPEP15421 78 aa10.38□□□□□ -0.75
DDX39A-221ENST00000593026 CTRLP40313 264 aa10.38□□□□□ -0.75
DDX39A-221ENST00000593026 RHOHQ15669 191 aa10.38□□□□□ -0.75
DDX39A-221ENST00000593026 MRPL23Q16540 153 aaKnown RBP10.38□□□□□ -0.75
DDX39A-221ENST00000593026 COMMD7Q86VX2 200 aa10.38□□□□□ -0.75
DDX39A-221ENST00000593026 SLC25A29Q8N8R3 303 aa10.38□□□□□ -0.75
DDX39A-221ENST00000593026 AP1S3Q96PC3 154 aa10.38□□□□□ -0.75
DDX39A-221ENST00000593026 PRADC1Q9BSG0 188 aa10.38□□□□□ -0.75
DDX39A-221ENST00000593026 ALMS1Q8TCU4 4167 aa10.37□□□□□ -0.75
DDX39A-221ENST00000593026 CCL18P55774 89 aa10.37□□□□□ -0.75
DDX39A-221ENST00000593026 RNF212Q495C1 297 aa10.37□□□□□ -0.75
DDX39A-221ENST00000593026 OR10G8Q8NGN5 311 aa10.37□□□□□ -0.75
DDX39A-221ENST00000593026 GTSF1Q8WW33 167 aa10.37□□□□□ -0.75
DDX39A-221ENST00000593026 LOC100131303A0A0U1RQF7 123 aa10.36□□□□□ -0.75
DDX39A-221ENST00000593026 K7EQD1 137 aa10.36□□□□□ -0.75
DDX39A-221ENST00000593026 SMIM17P0DL12 118 aa10.36□□□□□ -0.75
DDX39A-221ENST00000593026 SRIP30626 198 aa10.36□□□□□ -0.75
DDX39A-221ENST00000593026 WDR73Q6P4I2 378 aa10.36□□□□□ -0.75
DDX39A-221ENST00000593026 Q6ZSN1 163 aa10.36□□□□□ -0.75
DDX39A-221ENST00000593026 C14orf178Q8N769 122 aaPredicted RBP10.36□□□□□ -0.75
DDX39A-221ENST00000593026 TSKUQ8WUA8 353 aa10.36□□□□□ -0.75
DDX39A-221ENST00000593026 MSRB1Q9NZV6 116 aa10.36□□□□□ -0.75
DDX39A-221ENST00000593026 V9GYV3 84 aa10.36□□□□□ -0.75
DDX39A-221ENST00000593026 LINC00862A6NCI5 91 aa10.35□□□□□ -0.75
DDX39A-221ENST00000593026 NTF3P20783 257 aa10.35□□□□□ -0.75
DDX39A-221ENST00000593026 ZNF56Q15929 161 aa10.35□□□□□ -0.75
DDX39A-221ENST00000593026 NEGR1Q7Z3B1 354 aa10.35□□□□□ -0.75
DDX39A-221ENST00000593026 PGLYRP4Q96LB8 373 aa10.35□□□□□ -0.75
DDX39A-221ENST00000593026 CNFNQ9BYD5 112 aa10.35□□□□□ -0.75
DDX39A-221ENST00000593026 GFRA4Q9GZZ7 299 aa10.35□□□□□ -0.75
DDX39A-221ENST00000593026 FAM231BA6NCW3 169 aa10.34□□□□□ -0.75
DDX39A-221ENST00000593026 TRGC1P0CF51 173 aa10.34□□□□□ -0.75
DDX39A-221ENST00000593026 FOXA3P55318 350 aaPredicted RBP10.34□□□□□ -0.75
DDX39A-221ENST00000593026 PNRC1Q12796 327 aaPredicted RBP10.34□□□□□ -0.75
DDX39A-221ENST00000593026 BORCS7Q96B45 105 aa10.34□□□□□ -0.75
DDX39A-221ENST00000593026 LINC00588Q9Y4M8 146 aa10.34□□□□□ -0.75
DDX39A-221ENST00000593026 TMEM218A2RU14 115 aa10.33□□□□□ -0.76
DDX39A-221ENST00000593026 HIGD1CA8MV81 97 aa10.33□□□□□ -0.76
DDX39A-221ENST00000593026 FAM3BP58499 235 aaPredicted RBP10.33□□□□□ -0.76
DDX39A-221ENST00000593026 RAB4BP61018 213 aa10.33□□□□□ -0.76
DDX39A-221ENST00000593026 TWIST1Q15672 202 aa10.33□□□□□ -0.76
DDX39A-221ENST00000593026 ESRGQ1W209 222 aa10.33□□□□□ -0.76
DDX39A-221ENST00000593026 SH2D6Q7Z4S9 175 aa10.33□□□□□ -0.76
DDX39A-221ENST00000593026 KIF25-AS1Q9Y6Z4 181 aa10.33□□□□□ -0.76
DDX39A-221ENST00000593026 F5H697 171 aa10.32□□□□□ -0.76
DDX39A-221ENST00000593026 F8W036 122 aa10.32□□□□□ -0.76
DDX39A-221ENST00000593026 RYR2Q92736 4967 aa10.32□□□□□ -0.76
DDX39A-221ENST00000593026 MGPP08493 103 aa10.31□□□□□ -0.76
DDX39A-221ENST00000593026 ADCYAP1P18509 176 aa10.31□□□□□ -0.76
DDX39A-221ENST00000593026 EVI2AP22794 236 aa10.31□□□□□ -0.76
DDX39A-221ENST00000593026 DPH3P1Q9H4G8 78 aa10.31□□□□□ -0.76
DDX39A-221ENST00000593026 NAT8BQ9UHF3 227 aa10.31□□□□□ -0.76
DDX39A-221ENST00000593026 MRPS16Q9Y3D3 137 aaKnown RBP10.31□□□□□ -0.76
DDX39A-221ENST00000593026 SACSQ9NZJ4 4579 aa10.31□□□□□ -0.76
DDX39A-221ENST00000593026 TRBV10-1A0A0K0K1A3 114 aa10.3□□□□□ -0.76
DDX39A-221ENST00000593026 A0A1B0GUT8 65 aa10.3□□□□□ -0.76
DDX39A-221ENST00000593026 GAGE12JA6NER3 117 aa10.3□□□□□ -0.76
DDX39A-221ENST00000593026 PPP1R2P9O14990 202 aa10.3□□□□□ -0.76
DDX39A-221ENST00000593026 LINC00315P59091 139 aa10.3□□□□□ -0.76
DDX39A-221ENST00000593026 GAGE1Q13065 139 aa10.3□□□□□ -0.76
DDX39A-221ENST00000593026 GAGE4Q13068 117 aa10.3□□□□□ -0.76
DDX39A-221ENST00000593026 GAGE5Q13069 117 aa10.3□□□□□ -0.76
DDX39A-221ENST00000593026 GAGE13Q4V321 117 aa10.3□□□□□ -0.76
DDX39A-221ENST00000593026 LYPD5Q6UWN5 251 aa10.3□□□□□ -0.76
DDX39A-221ENST00000593026 SMIM15Q7Z3B0 74 aa10.3□□□□□ -0.76
DDX39A-221ENST00000593026 DNAH1Q9P2D7 4330 aa10.29□□□□□ -0.76
DDX39A-221ENST00000593026 SMIM27A0A1W2PRY6 76 aa10.29□□□□□ -0.76
DDX39A-221ENST00000593026 MT-ND4LP03901 98 aa10.29□□□□□ -0.76
DDX39A-221ENST00000593026 NUP35Q8NFH5 326 aa10.29□□□□□ -0.76
DDX39A-221ENST00000593026 ATP6V0E2Q8NHE4 81 aa10.29□□□□□ -0.76
DDX39A-221ENST00000593026 ZNRF2Q8NHG8 242 aa10.29□□□□□ -0.76
DDX39A-221ENST00000593026 UPK3BQ9BT76 320 aa10.29□□□□□ -0.76
DDX39A-221ENST00000593026 SEC11CQ9BY50 192 aa10.29□□□□□ -0.76
DDX39A-221ENST00000593026 Q9UF83 564 aa10.29□□□□□ -0.76
DDX39A-221ENST00000593026 HYDINQ4G0P3 5121 aa10.29□□□□□ -0.76
DDX39A-221ENST00000593026 LINC00694P0DN24 101 aa10.28□□□□□ -0.76
DDX39A-221ENST00000593026 RPL36AP83881 106 aaKnown RBP10.28□□□□□ -0.76
DDX39A-221ENST00000593026 RPL36ALQ969Q0 106 aaKnown RBP10.28□□□□□ -0.76
DDX39A-221ENST00000593026 IGLV2-18A0A075B6J9 118 aa10.27□□□□□ -0.77
DDX39A-221ENST00000593026 H7C1H1 209 aa10.27□□□□□ -0.77
DDX39A-221ENST00000593026 TIRAPP58753 221 aa10.27□□□□□ -0.77
DDX39A-221ENST00000593026 RIGQ13278 110 aa10.27□□□□□ -0.77
DDX39A-221ENST00000593026 ANAPC16Q96DE5 110 aa10.27□□□□□ -0.77
DDX39A-221ENST00000593026 VPS13DQ5THJ4 4388 aa10.26□□□□□ -0.77
DDX39A-221ENST00000593026 TRBV7-3A0A075B6L6 115 aa10.26□□□□□ -0.77
DDX39A-221ENST00000593026 SUMO4Q6EEV6 95 aa10.26□□□□□ -0.77
DDX39A-221ENST00000593026 NEXN-AS1Q8NBZ9 246 aa10.26□□□□□ -0.77
DDX39A-221ENST00000593026 GTSF1LQ9H1H1 148 aa10.26□□□□□ -0.77
DDX39A-221ENST00000593026 M0QY20 66 aa10.25□□□□□ -0.77
DDX39A-221ENST00000593026 Q9H8V8 135 aa10.25□□□□□ -0.77
DDX39A-221ENST00000593026 M0R2N4 97 aa10.24□□□□□ -0.77
DDX39A-221ENST00000593026 UBE2D3P61077 147 aa10.24□□□□□ -0.77
DDX39A-221ENST00000593026 UBE2D2P62837 147 aa10.24□□□□□ -0.77
DDX39A-221ENST00000593026 C10orf91Q5T1B1 145 aa10.24□□□□□ -0.77
DDX39A-221ENST00000593026 RASL11AQ6T310 242 aa10.24□□□□□ -0.77
DDX39A-221ENST00000593026 TMEM191AQ9H0A3 160 aa10.24□□□□□ -0.77
DDX39A-221ENST00000593026 A0A1B0GW15 77 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 124.5 ms