RNA–Protein interactions for RNA: ENST00000592467.1

CIRBP-239, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-239ENST00000592467 GAGE4Q13068 117 aa13.56□□□□□ -0.24
CIRBP-239ENST00000592467 GAGE5Q13069 117 aa13.56□□□□□ -0.24
CIRBP-239ENST00000592467 GAGE13Q4V321 117 aa13.56□□□□□ -0.24
CIRBP-239ENST00000592467 C10orf126Q8N4M7 172 aa13.56□□□□□ -0.24
CIRBP-239ENST00000592467 GNG13Q9P2W3 67 aa13.56□□□□□ -0.24
CIRBP-239ENST00000592467 PHLDA3Q9Y5J5 127 aa13.56□□□□□ -0.24
CIRBP-239ENST00000592467 A0A087WTM6 91 aa13.55□□□□□ -0.24
CIRBP-239ENST00000592467 A0A087WWL8 130 aa13.55□□□□□ -0.24
CIRBP-239ENST00000592467 IBA57-AS1B1ANH7 110 aa13.55□□□□□ -0.24
CIRBP-239ENST00000592467 M0R381 172 aa13.55□□□□□ -0.24
CIRBP-239ENST00000592467 RHODO00212 210 aa13.55□□□□□ -0.24
CIRBP-239ENST00000592467 RPL35P42766 123 aaKnown RBP13.55□□□□□ -0.24
CIRBP-239ENST00000592467 TRAV8-6A0A0B4J262 113 aa13.54□□□□□ -0.24
CIRBP-239ENST00000592467 IGLV2-8P01709 118 aa13.54□□□□□ -0.24
CIRBP-239ENST00000592467 FUSP35637 526 aaKnown RBP eCLIP13.54□□□□□ -0.24
CIRBP-239ENST00000592467 ERVFC1-1P60608 527 aa13.54□□□□□ -0.24
CIRBP-239ENST00000592467 OR10J3Q5JRS4 329 aa13.54□□□□□ -0.24
CIRBP-239ENST00000592467 EIF5AL1Q6IS14 154 aaKnown RBP13.54□□□□□ -0.24
CIRBP-239ENST00000592467 ZFP82Q8N141 532 aa13.54□□□□□ -0.24
CIRBP-239ENST00000592467 SSBP4Q9BWG4 385 aaPredicted RBP13.54□□□□□ -0.24
CIRBP-239ENST00000592467 SNAI2O43623 268 aa13.53□□□□□ -0.24
CIRBP-239ENST00000592467 FAM74A4Q5TZK3 123 aa13.53□□□□□ -0.24
CIRBP-239ENST00000592467 SLC51BQ86UW2 128 aa13.53□□□□□ -0.24
CIRBP-239ENST00000592467 Q8N3U1 123 aa13.53□□□□□ -0.24
CIRBP-239ENST00000592467 OR10AG1Q8NH19 301 aa13.53□□□□□ -0.24
CIRBP-239ENST00000592467 LRCOL1A6NCL2 159 aa13.51□□□□□ -0.25
CIRBP-239ENST00000592467 IGHV3-30P01768 117 aa13.51□□□□□ -0.25
CIRBP-239ENST00000592467 IGHV3-33P01772 117 aa13.51□□□□□ -0.25
CIRBP-239ENST00000592467 IGHV3-30-3P0DP02 117 aa13.51□□□□□ -0.25
CIRBP-239ENST00000592467 IGHV3-30-5P0DP03 117 aa13.51□□□□□ -0.25
CIRBP-239ENST00000592467 C9orf62Q8N4C0 152 aa13.51□□□□□ -0.25
CIRBP-239ENST00000592467 PGPEP1Q9NXJ5 209 aa13.51□□□□□ -0.25
CIRBP-239ENST00000592467 BOLA1Q9Y3E2 137 aa13.51□□□□□ -0.25
CIRBP-239ENST00000592467 OR5AL1P0C617 328 aa13.5□□□□□ -0.25
CIRBP-239ENST00000592467 CENPWQ5EE01 88 aa13.5□□□□□ -0.25
CIRBP-239ENST00000592467 PRR27Q6MZM9 219 aa13.5□□□□□ -0.25
CIRBP-239ENST00000592467 MEF2BQ02080 365 aaPredicted RBP13.49□□□□□ -0.25
CIRBP-239ENST00000592467 TRBV20OR9-2A0A075B6H5 130 aa13.48□□□□□ -0.25
CIRBP-239ENST00000592467 RAB19A4D1S5 217 aa13.48□□□□□ -0.25
CIRBP-239ENST00000592467 C19orf71A6NCJ1 209 aa13.48□□□□□ -0.25
CIRBP-239ENST00000592467 CDPF1Q6NVV7 123 aa13.48□□□□□ -0.25
CIRBP-239ENST00000592467 MUC21A0A0G2JKD1 596 aa13.47□□□□□ -0.25
CIRBP-239ENST00000592467 TRBV10-1A0A0K0K1A3 114 aa13.47□□□□□ -0.25
CIRBP-239ENST00000592467 MUC21A0A140T8X8 626 aa13.47□□□□□ -0.25
CIRBP-239ENST00000592467 EREGO14944 169 aa13.47□□□□□ -0.25
CIRBP-239ENST00000592467 BCL2P10415 239 aa13.47□□□□□ -0.25
CIRBP-239ENST00000592467 AKAP14Q86UN6 197 aa13.47□□□□□ -0.25
CIRBP-239ENST00000592467 KIF25-AS1Q9Y6Z4 181 aa13.47□□□□□ -0.25
CIRBP-239ENST00000592467 hCG_2014768A0A024R1R8 64 aa13.46□□□□□ -0.25
CIRBP-239ENST00000592467 TEX46H3BTG2 121 aa13.46□□□□□ -0.25
CIRBP-239ENST00000592467 UBE2D3P61077 147 aa13.46□□□□□ -0.25
CIRBP-239ENST00000592467 UBE2D2P62837 147 aa13.46□□□□□ -0.25
CIRBP-239ENST00000592467 LAGE3Q14657 143 aa13.46□□□□□ -0.25
CIRBP-239ENST00000592467 OR10G8Q8NGN5 311 aa13.46□□□□□ -0.25
CIRBP-239ENST00000592467 A0A087WWC5 75 aa13.45□□□□□ -0.26
CIRBP-239ENST00000592467 PDE6DO43924 150 aa13.45□□□□□ -0.26
CIRBP-239ENST00000592467 IGLC6P0CF74 106 aa13.45□□□□□ -0.26
CIRBP-239ENST00000592467 RAB4BP61018 213 aa13.45□□□□□ -0.26
CIRBP-239ENST00000592467 MAPKAPK5-AS1Q8N8E1 139 aa13.45□□□□□ -0.26
CIRBP-239ENST00000592467 SMIM12Q96EX1 92 aa13.45□□□□□ -0.26
CIRBP-239ENST00000592467 Q9HAA7 133 aa13.45□□□□□ -0.26
CIRBP-239ENST00000592467 DNAH8Q96JB1 4490 aa13.45□□□□□ -0.26
CIRBP-239ENST00000592467 GZMBP10144 247 aa13.44□□□□□ -0.26
CIRBP-239ENST00000592467 DAZ4Q86SG3 579 aaKnown RBP13.44□□□□□ -0.26
CIRBP-239ENST00000592467 DAZ3Q9NR90 486 aaKnown RBP13.44□□□□□ -0.26
CIRBP-239ENST00000592467 VAX2Q9UIW0 290 aa13.44□□□□□ -0.26
CIRBP-239ENST00000592467 TRBV7-3A0A075B6L6 115 aa13.43□□□□□ -0.26
CIRBP-239ENST00000592467 IFNA1P01562 189 aa13.43□□□□□ -0.26
CIRBP-239ENST00000592467 KRTAP10-1P60331 282 aa13.43□□□□□ -0.26
CIRBP-239ENST00000592467 NIT1Q86X76 327 aa13.43□□□□□ -0.26
CIRBP-239ENST00000592467 NEXN-AS1Q8NBZ9 246 aa13.43□□□□□ -0.26
CIRBP-239ENST00000592467 GNG4P50150 75 aa13.42□□□□□ -0.26
CIRBP-239ENST00000592467 RPL36AP83881 106 aaKnown RBP13.42□□□□□ -0.26
CIRBP-239ENST00000592467 SPANXN1Q5VSR9 72 aa13.42□□□□□ -0.26
CIRBP-239ENST00000592467 Q8N1X5 172 aa13.42□□□□□ -0.26
CIRBP-239ENST00000592467 RPL36ALQ969Q0 106 aaKnown RBP13.42□□□□□ -0.26
CIRBP-239ENST00000592467 MED9Q9NWA0 146 aa13.42□□□□□ -0.26
CIRBP-239ENST00000592467 RBFOX3A6NFN3 312 aa13.41□□□□□ -0.26
CIRBP-239ENST00000592467 XGP55808 180 aa13.41□□□□□ -0.26
CIRBP-239ENST00000592467 ZNF56Q15929 161 aa13.41□□□□□ -0.26
CIRBP-239ENST00000592467 FAT1Q14517 4588 aa13.41□□□□□ -0.26
CIRBP-239ENST00000592467 PSCAO43653 123 aa13.4□□□□□ -0.26
CIRBP-239ENST00000592467 WFDC2Q14508 124 aa13.4□□□□□ -0.26
CIRBP-239ENST00000592467 OR2D3Q8NGH3 330 aa13.4□□□□□ -0.26
CIRBP-239ENST00000592467 LYPD6BQ8NI32 183 aa13.4□□□□□ -0.26
CIRBP-239ENST00000592467 DNAJC30Q96LL9 226 aa13.4□□□□□ -0.26
CIRBP-239ENST00000592467 RPS20P60866 119 aaKnown RBP13.39□□□□□ -0.27
CIRBP-239ENST00000592467 SSTP61278 116 aa13.39□□□□□ -0.27
CIRBP-239ENST00000592467 ALKAL2Q6UX46 152 aa13.39□□□□□ -0.27
CIRBP-239ENST00000592467 Q8N814 137 aa13.39□□□□□ -0.27
CIRBP-239ENST00000592467 FER1L6-AS1Q8NA97 138 aa13.39□□□□□ -0.27
CIRBP-239ENST00000592467 TAGLN2P37802 199 aaKnown RBP13.38□□□□□ -0.27
CIRBP-239ENST00000592467 DAZAP1Q96EP5 407 aaKnown RBP13.38□□□□□ -0.27
CIRBP-239ENST00000592467 TRAV8-3A0A0A6YYJ7 113 aa13.37□□□□□ -0.27
CIRBP-239ENST00000592467 A0A1B0GVG6 124 aa13.37□□□□□ -0.27
CIRBP-239ENST00000592467 K7EN84 100 aa13.37□□□□□ -0.27
CIRBP-239ENST00000592467 AP1S3Q96PC3 154 aa13.37□□□□□ -0.27
CIRBP-239ENST00000592467 TRBV6-8A0A0A6YYG3 113 aa13.36□□□□□ -0.27
CIRBP-239ENST00000592467 P01737 135 aa13.36□□□□□ -0.27
CIRBP-239ENST00000592467 NUDT10Q8NFP7 164 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms