RNA–Protein interactions for RNA: ENST00000592244.1

LIG3-214, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-214ENST00000592244 SCRT2Q9NQ03 307 aa7.45□□□□□ -1.22
LIG3-214ENST00000592244 BIN3Q9NQY0 253 aa7.45□□□□□ -1.22
LIG3-214ENST00000592244 URGCP-MRPS24S4R325 110 aa7.45□□□□□ -1.22
LIG3-214ENST00000592244 hCG_2014768A0A024R1R8 64 aa7.44□□□□□ -1.22
LIG3-214ENST00000592244 TRBV10-1A0A0K0K1A3 114 aa7.44□□□□□ -1.22
LIG3-214ENST00000592244 XKRY2A2RUG3 117 aa7.44□□□□□ -1.22
LIG3-214ENST00000592244 IBA57-AS1B1ANH7 110 aa7.44□□□□□ -1.22
LIG3-214ENST00000592244 C1QBP02746 253 aa7.44□□□□□ -1.22
LIG3-214ENST00000592244 RPL35P42766 123 aaKnown RBP7.44□□□□□ -1.22
LIG3-214ENST00000592244 SULT1A2P50226 295 aa7.44□□□□□ -1.22
LIG3-214ENST00000592244 RPL36AP83881 106 aaKnown RBP7.44□□□□□ -1.22
LIG3-214ENST00000592244 LAGE3Q14657 143 aa7.44□□□□□ -1.22
LIG3-214ENST00000592244 SPANXN1Q5VSR9 72 aa7.44□□□□□ -1.22
LIG3-214ENST00000592244 PRR27Q6MZM9 219 aa7.44□□□□□ -1.22
LIG3-214ENST00000592244 RPL36ALQ969Q0 106 aaKnown RBP7.44□□□□□ -1.22
LIG3-214ENST00000592244 C11orf52Q96A22 123 aa7.44□□□□□ -1.22
LIG3-214ENST00000592244 SMIM12Q96EX1 92 aa7.44□□□□□ -1.22
LIG3-214ENST00000592244 MLST8Q9BVC4 326 aa7.44□□□□□ -1.22
LIG3-214ENST00000592244 TM2D2Q9BX73 214 aa7.44□□□□□ -1.22
LIG3-214ENST00000592244 A0A087WWL8 130 aa7.43□□□□□ -1.22
LIG3-214ENST00000592244 SMIM17P0DL12 118 aa7.43□□□□□ -1.22
LIG3-214ENST00000592244 RPS20P60866 119 aaKnown RBP7.43□□□□□ -1.22
LIG3-214ENST00000592244 MEF2BQ02080 365 aaPredicted RBP7.43□□□□□ -1.22
LIG3-214ENST00000592244 UFSP1Q6NVU6 142 aa7.43□□□□□ -1.22
LIG3-214ENST00000592244 AKAP14Q86UN6 197 aa7.43□□□□□ -1.22
LIG3-214ENST00000592244 SAMD10Q9BYL1 202 aa7.43□□□□□ -1.22
LIG3-214ENST00000592244 JPT2Q9H910 190 aa7.43□□□□□ -1.22
LIG3-214ENST00000592244 PKD1P98161 4303 aa7.43□□□□□ -1.22
LIG3-214ENST00000592244 A0A087WTM6 91 aa7.42□□□□□ -1.22
LIG3-214ENST00000592244 TRAV8-3A0A0A6YYJ7 113 aa7.42□□□□□ -1.22
LIG3-214ENST00000592244 IGHV3-30P01768 117 aa7.42□□□□□ -1.22
LIG3-214ENST00000592244 IGHV3-33P01772 117 aa7.42□□□□□ -1.22
LIG3-214ENST00000592244 OR5AL1P0C617 328 aa7.42□□□□□ -1.22
LIG3-214ENST00000592244 IGHV3-30-3P0DP02 117 aa7.42□□□□□ -1.22
LIG3-214ENST00000592244 IGHV3-30-5P0DP03 117 aa7.42□□□□□ -1.22
LIG3-214ENST00000592244 GNG4P50150 75 aa7.42□□□□□ -1.22
LIG3-214ENST00000592244 RAB4BP61018 213 aa7.42□□□□□ -1.22
LIG3-214ENST00000592244 Q6ZSN1 163 aa7.42□□□□□ -1.22
LIG3-214ENST00000592244 C14orf178Q8N769 122 aaPredicted RBP7.42□□□□□ -1.22
LIG3-214ENST00000592244 VAX2Q9UIW0 290 aa7.42□□□□□ -1.22
LIG3-214ENST00000592244 TNFRSF18Q9Y5U5 241 aa7.42□□□□□ -1.22
LIG3-214ENST00000592244 COX11Q9Y6N1 276 aa7.42□□□□□ -1.22
LIG3-214ENST00000592244 KIAA1109Q2LD37 5005 aa7.42□□□□□ -1.22
LIG3-214ENST00000592244 HERC2O95714 4834 aa7.41□□□□□ -1.22
LIG3-214ENST00000592244 DNAH11Q96DT5 4516 aa7.41□□□□□ -1.22
LIG3-214ENST00000592244 TRBV7-3A0A075B6L6 115 aa7.41□□□□□ -1.22
LIG3-214ENST00000592244 KRTAP10-2P60368 255 aa7.41□□□□□ -1.22
LIG3-214ENST00000592244 CCL20P78556 96 aa7.41□□□□□ -1.22
LIG3-214ENST00000592244 ELOBQ15370 118 aa7.41□□□□□ -1.22
LIG3-214ENST00000592244 ZNF56Q15929 161 aa7.41□□□□□ -1.22
LIG3-214ENST00000592244 CENPWQ5EE01 88 aa7.41□□□□□ -1.22
LIG3-214ENST00000592244 Q6ZNX1 250 aa7.41□□□□□ -1.22
LIG3-214ENST00000592244 RMI2Q96E14 147 aa7.41□□□□□ -1.22
LIG3-214ENST00000592244 AP1S3Q96PC3 154 aa7.41□□□□□ -1.22
LIG3-214ENST00000592244 Q9HAA7 133 aa7.41□□□□□ -1.22
LIG3-214ENST00000592244 MED9Q9NWA0 146 aa7.41□□□□□ -1.22
LIG3-214ENST00000592244 A0A087WX48 190 aa7.4□□□□□ -1.22
LIG3-214ENST00000592244 F5H697 171 aa7.4□□□□□ -1.22
LIG3-214ENST00000592244 SNAI2O43623 268 aa7.4□□□□□ -1.22
LIG3-214ENST00000592244 LINC00694P0DN24 101 aa7.4□□□□□ -1.22
LIG3-214ENST00000592244 BCL2P10415 239 aa7.4□□□□□ -1.22
LIG3-214ENST00000592244 PKIAP61925 76 aa7.4□□□□□ -1.22
LIG3-214ENST00000592244 RPL19P84098 196 aaKnown RBP7.4□□□□□ -1.22
LIG3-214ENST00000592244 NTN5Q8WTR8 489 aaPredicted RBP7.4□□□□□ -1.22
LIG3-214ENST00000592244 CHCHD7Q9BUK0 85 aa7.4□□□□□ -1.22
LIG3-214ENST00000592244 SSBP4Q9BWG4 385 aaPredicted RBP7.4□□□□□ -1.22
LIG3-214ENST00000592244 F2Z2F3 143 aa7.39□□□□□ -1.23
LIG3-214ENST00000592244 P01737 135 aa7.39□□□□□ -1.23
LIG3-214ENST00000592244 CACNG7P62955 275 aa7.39□□□□□ -1.23
LIG3-214ENST00000592244 BLOC1S1P78537 153 aa7.39□□□□□ -1.23
LIG3-214ENST00000592244 TMEM97Q5BJF2 176 aa7.39□□□□□ -1.23
LIG3-214ENST00000592244 MAPKAPK5-AS1Q8N8E1 139 aa7.39□□□□□ -1.23
LIG3-214ENST00000592244 OR2D3Q8NGH3 330 aa7.39□□□□□ -1.23
LIG3-214ENST00000592244 OR10AG1Q8NH19 301 aa7.39□□□□□ -1.23
LIG3-214ENST00000592244 DERL1Q9BUN8 251 aa7.39□□□□□ -1.23
LIG3-214ENST00000592244 TPPP3Q9BW30 176 aa7.39□□□□□ -1.23
LIG3-214ENST00000592244 H7C1H1 209 aa7.38□□□□□ -1.23
LIG3-214ENST00000592244 FER1L6-AS1Q8NA97 138 aa7.38□□□□□ -1.23
LIG3-214ENST00000592244 OR10G8Q8NGN5 311 aa7.38□□□□□ -1.23
LIG3-214ENST00000592244 IGLV5-52A0A0A0MRZ9 124 aa7.37□□□□□ -1.23
LIG3-214ENST00000592244 RBFOX3A6NFN3 312 aa7.37□□□□□ -1.23
LIG3-214ENST00000592244 GCSHP23434 173 aa7.37□□□□□ -1.23
LIG3-214ENST00000592244 UBE2D3P61077 147 aa7.37□□□□□ -1.23
LIG3-214ENST00000592244 SSTP61278 116 aa7.37□□□□□ -1.23
LIG3-214ENST00000592244 UBE2D2P62837 147 aa7.37□□□□□ -1.23
LIG3-214ENST00000592244 DAZ4Q86SG3 579 aaKnown RBP7.37□□□□□ -1.23
LIG3-214ENST00000592244 DAZ3Q9NR90 486 aaKnown RBP7.37□□□□□ -1.23
LIG3-214ENST00000592244 RAB19A4D1S5 217 aa7.36□□□□□ -1.23
LIG3-214ENST00000592244 TMEM262E9PQX1 116 aa7.36□□□□□ -1.23
LIG3-214ENST00000592244 TRGC1P0CF51 173 aa7.36□□□□□ -1.23
LIG3-214ENST00000592244 Q0VG73 95 aa7.36□□□□□ -1.23
LIG3-214ENST00000592244 NIT1Q86X76 327 aa7.36□□□□□ -1.23
LIG3-214ENST00000592244 C9orf62Q8N4C0 152 aa7.36□□□□□ -1.23
LIG3-214ENST00000592244 Q9UF83 564 aa7.36□□□□□ -1.23
LIG3-214ENST00000592244 DYNC1H1Q14204 4646 aaKnown RBP7.36□□□□□ -1.23
LIG3-214ENST00000592244 TRBV6-8A0A0A6YYG3 113 aa7.35□□□□□ -1.23
LIG3-214ENST00000592244 MUC21A0A0G2JKD1 596 aa7.35□□□□□ -1.23
LIG3-214ENST00000592244 MUC21A0A140T8X8 626 aa7.35□□□□□ -1.23
LIG3-214ENST00000592244 C19orf71A6NCJ1 209 aa7.35□□□□□ -1.23
LIG3-214ENST00000592244 Q8N1X5 172 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms