RNA–Protein interactions for RNA: ENST00000592023.5

ERCC1-213, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-213ENST00000592023 RPL35P42766 123 aaKnown RBP10.27□□□□□ -0.77
ERCC1-213ENST00000592023 LINC01556Q5JQF7 62 aa10.27□□□□□ -0.77
ERCC1-213ENST00000592023 LELP1Q5T871 98 aa10.27□□□□□ -0.77
ERCC1-213ENST00000592023 AKAP14Q86UN6 197 aa10.27□□□□□ -0.77
ERCC1-213ENST00000592023 C11orf52Q96A22 123 aa10.27□□□□□ -0.77
ERCC1-213ENST00000592023 MLST8Q9BVC4 326 aa10.27□□□□□ -0.77
ERCC1-213ENST00000592023 GTSF1LQ9H1H1 148 aa10.27□□□□□ -0.77
ERCC1-213ENST00000592023 IGHV3-30P01768 117 aa10.26□□□□□ -0.77
ERCC1-213ENST00000592023 IGHV3-33P01772 117 aa10.26□□□□□ -0.77
ERCC1-213ENST00000592023 IGHV3-30-3P0DP02 117 aa10.26□□□□□ -0.77
ERCC1-213ENST00000592023 IGHV3-30-5P0DP03 117 aa10.26□□□□□ -0.77
ERCC1-213ENST00000592023 SLC51BQ86UW2 128 aa10.26□□□□□ -0.77
ERCC1-213ENST00000592023 SFRP2Q96HF1 295 aa10.26□□□□□ -0.77
ERCC1-213ENST00000592023 Q9UF83 564 aa10.26□□□□□ -0.77
ERCC1-213ENST00000592023 EREGO14944 169 aa10.25□□□□□ -0.77
ERCC1-213ENST00000592023 FUSP35637 526 aaKnown RBP eCLIP10.25□□□□□ -0.77
ERCC1-213ENST00000592023 CENPWQ5EE01 88 aa10.25□□□□□ -0.77
ERCC1-213ENST00000592023 OR10AG1Q8NH19 301 aa10.25□□□□□ -0.77
ERCC1-213ENST00000592023 RYR1P21817 5038 aa10.25□□□□□ -0.77
ERCC1-213ENST00000592023 IFNA1P01562 189 aa10.24□□□□□ -0.77
ERCC1-213ENST00000592023 CXCL1P09341 107 aa10.24□□□□□ -0.77
ERCC1-213ENST00000592023 Q9HAA7 133 aa10.24□□□□□ -0.77
ERCC1-213ENST00000592023 A0A087WTM6 91 aa10.23□□□□□ -0.77
ERCC1-213ENST00000592023 MUC21A0A0G2JKD1 596 aa10.23□□□□□ -0.77
ERCC1-213ENST00000592023 MUC21A0A140T8X8 626 aa10.23□□□□□ -0.77
ERCC1-213ENST00000592023 CDK2AP2O75956 126 aa10.23□□□□□ -0.77
ERCC1-213ENST00000592023 MEF2BQ02080 365 aaPredicted RBP10.23□□□□□ -0.77
ERCC1-213ENST00000592023 Q8N3U1 123 aa10.23□□□□□ -0.77
ERCC1-213ENST00000592023 C9orf62Q8N4C0 152 aa10.23□□□□□ -0.77
ERCC1-213ENST00000592023 KRTAP17-1Q9BYP8 105 aa10.23□□□□□ -0.77
ERCC1-213ENST00000592023 BCL2P10415 239 aa10.22□□□□□ -0.77
ERCC1-213ENST00000592023 ZNF56Q15929 161 aa10.22□□□□□ -0.77
ERCC1-213ENST00000592023 BOLA1Q9Y3E2 137 aa10.22□□□□□ -0.77
ERCC1-213ENST00000592023 LRP1BQ9NZR2 4599 aa10.21□□□□□ -0.77
ERCC1-213ENST00000592023 RAB19A4D1S5 217 aa10.21□□□□□ -0.77
ERCC1-213ENST00000592023 IBA57-AS1B1ANH7 110 aa10.21□□□□□ -0.77
ERCC1-213ENST00000592023 SNAI2O43623 268 aa10.21□□□□□ -0.77
ERCC1-213ENST00000592023 PSCAO43653 123 aa10.21□□□□□ -0.77
ERCC1-213ENST00000592023 GNG4P50150 75 aa10.21□□□□□ -0.77
ERCC1-213ENST00000592023 SSTP61278 116 aa10.21□□□□□ -0.77
ERCC1-213ENST00000592023 SPANXN1Q5VSR9 72 aa10.21□□□□□ -0.77
ERCC1-213ENST00000592023 PDE6DO43924 150 aa10.2□□□□□ -0.78
ERCC1-213ENST00000592023 IGLV2-8P01709 118 aa10.2□□□□□ -0.78
ERCC1-213ENST00000592023 OR5AL1P0C617 328 aa10.2□□□□□ -0.78
ERCC1-213ENST00000592023 MED9Q9NWA0 146 aa10.2□□□□□ -0.78
ERCC1-213ENST00000592023 A0A087WWC5 75 aa10.19□□□□□ -0.78
ERCC1-213ENST00000592023 TRBV10-1A0A0K0K1A3 114 aa10.19□□□□□ -0.78
ERCC1-213ENST00000592023 GZMBP10144 247 aa10.19□□□□□ -0.78
ERCC1-213ENST00000592023 RPL36AP83881 106 aaKnown RBP10.19□□□□□ -0.78
ERCC1-213ENST00000592023 OR2D3Q8NGH3 330 aa10.19□□□□□ -0.78
ERCC1-213ENST00000592023 RPL36ALQ969Q0 106 aaKnown RBP10.19□□□□□ -0.78
ERCC1-213ENST00000592023 DAZAP1Q96EP5 407 aaKnown RBP10.19□□□□□ -0.78
ERCC1-213ENST00000592023 TPPP3Q9BW30 176 aa10.19□□□□□ -0.78
ERCC1-213ENST00000592023 SSBP4Q9BWG4 385 aaPredicted RBP10.19□□□□□ -0.78
ERCC1-213ENST00000592023 VAX2Q9UIW0 290 aa10.19□□□□□ -0.78
ERCC1-213ENST00000592023 TRBV20OR9-2A0A075B6H5 130 aa10.18□□□□□ -0.78
ERCC1-213ENST00000592023 CDPF1Q6NVV7 123 aa10.18□□□□□ -0.78
ERCC1-213ENST00000592023 ALKAL2Q6UX46 152 aa10.18□□□□□ -0.78
ERCC1-213ENST00000592023 MAPKAPK5-AS1Q8N8E1 139 aa10.18□□□□□ -0.78
ERCC1-213ENST00000592023 SMIM12Q96EX1 92 aa10.18□□□□□ -0.78
ERCC1-213ENST00000592023 PGPEP1Q9NXJ5 209 aa10.18□□□□□ -0.78
ERCC1-213ENST00000592023 C19orf71A6NCJ1 209 aa10.17□□□□□ -0.78
ERCC1-213ENST00000592023 RBFOX3A6NFN3 312 aa10.17□□□□□ -0.78
ERCC1-213ENST00000592023 RAB4BP61018 213 aa10.17□□□□□ -0.78
ERCC1-213ENST00000592023 UBE2D3P61077 147 aa10.17□□□□□ -0.78
ERCC1-213ENST00000592023 UBE2D2P62837 147 aa10.17□□□□□ -0.78
ERCC1-213ENST00000592023 LAGE3Q14657 143 aa10.17□□□□□ -0.78
ERCC1-213ENST00000592023 DAZ4Q86SG3 579 aaKnown RBP10.17□□□□□ -0.78
ERCC1-213ENST00000592023 FER1L6-AS1Q8NA97 138 aa10.17□□□□□ -0.78
ERCC1-213ENST00000592023 AP1S3Q96PC3 154 aa10.17□□□□□ -0.78
ERCC1-213ENST00000592023 DAZ3Q9NR90 486 aaKnown RBP10.17□□□□□ -0.78
ERCC1-213ENST00000592023 DNAH5Q8TE73 4624 aa10.17□□□□□ -0.78
ERCC1-213ENST00000592023 HSPG2P98160 4391 aa10.17□□□□□ -0.78
ERCC1-213ENST00000592023 TRBV7-3A0A075B6L6 115 aa10.16□□□□□ -0.78
ERCC1-213ENST00000592023 F5H697 171 aa10.16□□□□□ -0.78
ERCC1-213ENST00000592023 P01737 135 aa10.16□□□□□ -0.78
ERCC1-213ENST00000592023 IGLC6P0CF74 106 aa10.16□□□□□ -0.78
ERCC1-213ENST00000592023 TAGLN2P37802 199 aaKnown RBP10.16□□□□□ -0.78
ERCC1-213ENST00000592023 RPS20P60866 119 aaKnown RBP10.16□□□□□ -0.78
ERCC1-213ENST00000592023 NEXN-AS1Q8NBZ9 246 aa10.16□□□□□ -0.78
ERCC1-213ENST00000592023 KRTAP4-5Q9BYR2 181 aa10.16□□□□□ -0.78
ERCC1-213ENST00000592023 URGCP-MRPS24S4R325 110 aa10.16□□□□□ -0.78
ERCC1-213ENST00000592023 PCLOQ9Y6V0 5065 aa10.16□□□□□ -0.78
ERCC1-213ENST00000592023 LRCOL1A6NCL2 159 aa10.15□□□□□ -0.78
ERCC1-213ENST00000592023 SMIM17P0DL12 118 aa10.15□□□□□ -0.78
ERCC1-213ENST00000592023 NKX2-5P52952 324 aaPredicted RBP10.15□□□□□ -0.78
ERCC1-213ENST00000592023 NIT1Q86X76 327 aa10.15□□□□□ -0.78
ERCC1-213ENST00000592023 OR10G8Q8NGN5 311 aa10.15□□□□□ -0.78
ERCC1-213ENST00000592023 APOBP04114 4563 aaKnown RBP10.14□□□□□ -0.79
ERCC1-213ENST00000592023 MGPP08493 103 aa10.14□□□□□ -0.79
ERCC1-213ENST00000592023 A0A1B0GVG6 124 aa10.13□□□□□ -0.79
ERCC1-213ENST00000592023 XKRY2A2RUG3 117 aa10.13□□□□□ -0.79
ERCC1-213ENST00000592023 BLOC1S1P78537 153 aa10.13□□□□□ -0.79
ERCC1-213ENST00000592023 TOR2AQ5JU69 321 aa10.13□□□□□ -0.79
ERCC1-213ENST00000592023 TM2D2Q9BX73 214 aa10.13□□□□□ -0.79
ERCC1-213ENST00000592023 BIN3Q9NQY0 253 aa10.13□□□□□ -0.79
ERCC1-213ENST00000592023 KIF25-AS1Q9Y6Z4 181 aa10.13□□□□□ -0.79
ERCC1-213ENST00000592023 TRAV8-3A0A0A6YYJ7 113 aa10.12□□□□□ -0.79
ERCC1-213ENST00000592023 KRTAP10-1P60331 282 aa10.12□□□□□ -0.79
ERCC1-213ENST00000592023 CACNG7P62955 275 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms