RNA–Protein interactions for RNA: ENST00000591914.5

SMAD4-213, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 992 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-213ENST00000591914 A0A087WWL8 130 aa18.44■□□□□ 0.54
SMAD4-213ENST00000591914 IGLV2-8P01709 118 aa18.44■□□□□ 0.54
SMAD4-213ENST00000591914 LELP1Q5T871 98 aa18.44■□□□□ 0.54
SMAD4-213ENST00000591914 NFE4Q86UQ8 179 aa18.44■□□□□ 0.54
SMAD4-213ENST00000591914 SSBP4Q9BWG4 385 aaPredicted RBP18.44■□□□□ 0.54
SMAD4-213ENST00000591914 VAX2Q9UIW0 290 aa18.44■□□□□ 0.54
SMAD4-213ENST00000591914 TRAV8-6A0A0B4J262 113 aa18.43■□□□□ 0.54
SMAD4-213ENST00000591914 GAGE12JA6NER3 117 aa18.43■□□□□ 0.54
SMAD4-213ENST00000591914 SNAI2O43623 268 aa18.43■□□□□ 0.54
SMAD4-213ENST00000591914 GAGE1Q13065 139 aa18.43■□□□□ 0.54
SMAD4-213ENST00000591914 GAGE4Q13068 117 aa18.43■□□□□ 0.54
SMAD4-213ENST00000591914 GAGE5Q13069 117 aa18.43■□□□□ 0.54
SMAD4-213ENST00000591914 GAGE13Q4V321 117 aa18.43■□□□□ 0.54
SMAD4-213ENST00000591914 LINC01556Q5JQF7 62 aa18.43■□□□□ 0.54
SMAD4-213ENST00000591914 OR10AG1Q8NH19 301 aa18.43■□□□□ 0.54
SMAD4-213ENST00000591914 SMIM12Q96EX1 92 aa18.43■□□□□ 0.54
SMAD4-213ENST00000591914 MSRB1Q9NZV6 116 aa18.43■□□□□ 0.54
SMAD4-213ENST00000591914 BOLA1Q9Y3E2 137 aa18.43■□□□□ 0.54
SMAD4-213ENST00000591914 RAB19A4D1S5 217 aa18.42■□□□□ 0.54
SMAD4-213ENST00000591914 OR5AL1P0C617 328 aa18.42■□□□□ 0.54
SMAD4-213ENST00000591914 TAGLN2P37802 199 aaKnown RBP18.42■□□□□ 0.54
SMAD4-213ENST00000591914 OR10J3Q5JRS4 329 aa18.42■□□□□ 0.54
SMAD4-213ENST00000591914 C10orf126Q8N4M7 172 aa18.42■□□□□ 0.54
SMAD4-213ENST00000591914 A0A1B0GVG6 124 aa18.41■□□□□ 0.54
SMAD4-213ENST00000591914 GNG4P50150 75 aa18.41■□□□□ 0.54
SMAD4-213ENST00000591914 ALKAL2Q6UX46 152 aa18.41■□□□□ 0.54
SMAD4-213ENST00000591914 MED9Q9NWA0 146 aa18.41■□□□□ 0.54
SMAD4-213ENST00000591914 TRBV20OR9-2A0A075B6H5 130 aa18.4■□□□□ 0.54
SMAD4-213ENST00000591914 C16orf90A8MZG2 172 aa18.4■□□□□ 0.54
SMAD4-213ENST00000591914 SPATA12Q7Z6I5 190 aa18.4■□□□□ 0.54
SMAD4-213ENST00000591914 C19orf71A6NCJ1 209 aa18.38■□□□□ 0.53
SMAD4-213ENST00000591914 NKX2-5P52952 324 aaPredicted RBP18.36■□□□□ 0.53
SMAD4-213ENST00000591914 KRTAP10-2P60368 255 aa18.36■□□□□ 0.53
SMAD4-213ENST00000591914 BLOC1S1P78537 153 aa18.36■□□□□ 0.53
SMAD4-213ENST00000591914 SPANXN1Q5VSR9 72 aa18.36■□□□□ 0.53
SMAD4-213ENST00000591914 DAZAP1Q96EP5 407 aaKnown RBP18.36■□□□□ 0.53
SMAD4-213ENST00000591914 MUC21A0A0G2JKD1 596 aa18.35■□□□□ 0.53
SMAD4-213ENST00000591914 TRBV10-1A0A0K0K1A3 114 aa18.35■□□□□ 0.53
SMAD4-213ENST00000591914 MUC21A0A140T8X8 626 aa18.35■□□□□ 0.53
SMAD4-213ENST00000591914 LYPD6BQ8NI32 183 aa18.35■□□□□ 0.53
SMAD4-213ENST00000591914 A0A087WWC5 75 aa18.34■□□□□ 0.53
SMAD4-213ENST00000591914 ERVFC1-1P60608 527 aa18.34■□□□□ 0.53
SMAD4-213ENST00000591914 RPS20P60866 119 aaKnown RBP18.34■□□□□ 0.53
SMAD4-213ENST00000591914 RAB4BP61018 213 aa18.34■□□□□ 0.53
SMAD4-213ENST00000591914 OR2D3Q8NGH3 330 aa18.34■□□□□ 0.53
SMAD4-213ENST00000591914 LRP1BQ9NZR2 4599 aa18.34■□□□□ 0.53
SMAD4-213ENST00000591914 IBA57-AS1B1ANH7 110 aa18.33■□□□□ 0.52
SMAD4-213ENST00000591914 IGLC6P0CF74 106 aa18.33■□□□□ 0.52
SMAD4-213ENST00000591914 BIN3Q9NQY0 253 aa18.33■□□□□ 0.52
SMAD4-213ENST00000591914 IGHV3-30P01768 117 aa18.32■□□□□ 0.52
SMAD4-213ENST00000591914 IGHV3-33P01772 117 aa18.32■□□□□ 0.52
SMAD4-213ENST00000591914 IGHV3-30-3P0DP02 117 aa18.32■□□□□ 0.52
SMAD4-213ENST00000591914 IGHV3-30-5P0DP03 117 aa18.32■□□□□ 0.52
SMAD4-213ENST00000591914 GZMBP10144 247 aa18.32■□□□□ 0.52
SMAD4-213ENST00000591914 RYR1P21817 5038 aa18.32■□□□□ 0.52
SMAD4-213ENST00000591914 P01737 135 aa18.31■□□□□ 0.52
SMAD4-213ENST00000591914 RPL36AP83881 106 aaKnown RBP18.3■□□□□ 0.52
SMAD4-213ENST00000591914 ZNF56Q15929 161 aa18.3■□□□□ 0.52
SMAD4-213ENST00000591914 FER1L6-AS1Q8NA97 138 aa18.3■□□□□ 0.52
SMAD4-213ENST00000591914 OR10G8Q8NGN5 311 aa18.3■□□□□ 0.52
SMAD4-213ENST00000591914 RPL36ALQ969Q0 106 aaKnown RBP18.3■□□□□ 0.52
SMAD4-213ENST00000591914 KIF25-AS1Q9Y6Z4 181 aa18.3■□□□□ 0.52
SMAD4-213ENST00000591914 TRBV7-3A0A075B6L6 115 aa18.29■□□□□ 0.52
SMAD4-213ENST00000591914 RBFOX3A6NFN3 312 aa18.29■□□□□ 0.52
SMAD4-213ENST00000591914 UBE2D3P61077 147 aa18.29■□□□□ 0.52
SMAD4-213ENST00000591914 SSTP61278 116 aa18.29■□□□□ 0.52
SMAD4-213ENST00000591914 UBE2D2P62837 147 aa18.29■□□□□ 0.52
SMAD4-213ENST00000591914 AP1S3Q96PC3 154 aa18.29■□□□□ 0.52
SMAD4-213ENST00000591914 A0A087WTM6 91 aa18.28■□□□□ 0.52
SMAD4-213ENST00000591914 XKRY2A2RUG3 117 aa18.28■□□□□ 0.52
SMAD4-213ENST00000591914 TMEM250H0YL14 139 aa18.28■□□□□ 0.52
SMAD4-213ENST00000591914 EREGO14944 169 aa18.28■□□□□ 0.52
SMAD4-213ENST00000591914 Q8N3U1 123 aa18.28■□□□□ 0.52
SMAD4-213ENST00000591914 TPPP3Q9BW30 176 aa18.28■□□□□ 0.52
SMAD4-213ENST00000591914 DNAH5Q8TE73 4624 aa18.28■□□□□ 0.52
SMAD4-213ENST00000591914 LAGE3Q14657 143 aa18.27■□□□□ 0.52
SMAD4-213ENST00000591914 NUDT10Q8NFP7 164 aa18.26■□□□□ 0.51
SMAD4-213ENST00000591914 NUDT11Q96G61 164 aa18.26■□□□□ 0.51
SMAD4-213ENST00000591914 F2Z2F3 143 aa18.25■□□□□ 0.51
SMAD4-213ENST00000591914 K7EN84 100 aa18.25■□□□□ 0.51
SMAD4-213ENST00000591914 CDK2AP2O75956 126 aa18.25■□□□□ 0.51
SMAD4-213ENST00000591914 CACNG7P62955 275 aa18.25■□□□□ 0.51
SMAD4-213ENST00000591914 NEXN-AS1Q8NBZ9 246 aa18.25■□□□□ 0.51
SMAD4-213ENST00000591914 OCC1Q8TAD7 63 aa18.25■□□□□ 0.51
SMAD4-213ENST00000591914 Q9HAA7 133 aa18.25■□□□□ 0.51
SMAD4-213ENST00000591914 PGPEP1Q9NXJ5 209 aa18.25■□□□□ 0.51
SMAD4-213ENST00000591914 SMIM17P0DL12 118 aa18.24■□□□□ 0.51
SMAD4-213ENST00000591914 F5H697 171 aa18.23■□□□□ 0.51
SMAD4-213ENST00000591914 HSPG2P98160 4391 aa18.23■□□□□ 0.51
SMAD4-213ENST00000591914 CDPF1Q6NVV7 123 aa18.22■□□□□ 0.51
SMAD4-213ENST00000591914 DAZ4Q86SG3 579 aaKnown RBP18.22■□□□□ 0.51
SMAD4-213ENST00000591914 NIT1Q86X76 327 aa18.22■□□□□ 0.51
SMAD4-213ENST00000591914 DAZ3Q9NR90 486 aaKnown RBP18.22■□□□□ 0.51
SMAD4-213ENST00000591914 PSCAO43653 123 aa18.21■□□□□ 0.51
SMAD4-213ENST00000591914 LYZL1Q6UWQ5 148 aa18.21■□□□□ 0.51
SMAD4-213ENST00000591914 RNASE7Q9H1E1 156 aaKnown RBP18.21■□□□□ 0.51
SMAD4-213ENST00000591914 RPP21Q9H633 154 aaKnown RBP18.21■□□□□ 0.51
SMAD4-213ENST00000591914 LRCOL1A6NCL2 159 aa18.2■□□□□ 0.5
SMAD4-213ENST00000591914 CTRLP40313 264 aa18.2■□□□□ 0.5
SMAD4-213ENST00000591914 TOR2AQ5JU69 321 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms