RNA–Protein interactions for RNA: ENST00000591782.1

VMP1-212, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 729 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-212ENST00000591782 ATP11AUNQ6ZP68 121 aa2.4□□□□□ -2.03
VMP1-212ENST00000591782 SCXQ7RTU7 201 aa2.4□□□□□ -2.03
VMP1-212ENST00000591782 RPRMLQ8N4K4 120 aa2.4□□□□□ -2.03
VMP1-212ENST00000591782 UBALD1Q8TB05 177 aa2.4□□□□□ -2.03
VMP1-212ENST00000591782 ZC2HC1AQ96GY0 325 aa2.4□□□□□ -2.03
VMP1-212ENST00000591782 SLC50A1Q9BRV3 221 aa2.4□□□□□ -2.03
VMP1-212ENST00000591782 PRO3102Q9H379 93 aa2.4□□□□□ -2.03
VMP1-212ENST00000591782 Q9H3A6 140 aa2.4□□□□□ -2.03
VMP1-212ENST00000591782 ZNF702PQ9H963 129 aa2.4□□□□□ -2.03
VMP1-212ENST00000591782 MRPL35Q9NZE8 188 aaKnown RBP2.4□□□□□ -2.03
VMP1-212ENST00000591782 LAMA3Q16787 3333 aa2.4□□□□□ -2.03
VMP1-212ENST00000591782 COL11A1P12107 1806 aaPredicted RBP2.4□□□□□ -2.03
VMP1-212ENST00000591782 GTF3C1Q12789 2109 aa2.39□□□□□ -2.03
VMP1-212ENST00000591782 SETXQ7Z333 2677 aaKnown RBP2.39□□□□□ -2.03
VMP1-212ENST00000591782 LCTP09848 1927 aa2.39□□□□□ -2.03
VMP1-212ENST00000591782 IGLV1-36A0A0B4J1U3 117 aa2.39□□□□□ -2.03
VMP1-212ENST00000591782 TRAV13-2A0A0B4J235 113 aa2.39□□□□□ -2.03
VMP1-212ENST00000591782 FFAR1O14842 300 aa2.39□□□□□ -2.03
VMP1-212ENST00000591782 IGKV1-5P01602 117 aa2.39□□□□□ -2.03
VMP1-212ENST00000591782 PRM2P04554 102 aa2.39□□□□□ -2.03
VMP1-212ENST00000591782 CCKP06307 115 aa2.39□□□□□ -2.03
VMP1-212ENST00000591782 FCER1GP30273 86 aa2.39□□□□□ -2.03
VMP1-212ENST00000591782 EFNA4P52798 201 aa2.39□□□□□ -2.03
VMP1-212ENST00000591782 BLCAPP62952 87 aa2.39□□□□□ -2.03
VMP1-212ENST00000591782 RPL38P63173 70 aaKnown RBP2.39□□□□□ -2.03
VMP1-212ENST00000591782 KIAA0087Q14695 138 aa2.39□□□□□ -2.03
VMP1-212ENST00000591782 RHOHQ15669 191 aa2.39□□□□□ -2.03
VMP1-212ENST00000591782 ESRGQ1W209 222 aa2.39□□□□□ -2.03
VMP1-212ENST00000591782 RSPO1Q2MKA7 263 aaPredicted RBP2.39□□□□□ -2.03
VMP1-212ENST00000591782 MRPL51Q4U2R6 128 aaKnown RBP2.39□□□□□ -2.03
VMP1-212ENST00000591782 Q6JHZ5 121 aa2.39□□□□□ -2.03
VMP1-212ENST00000591782 C2orf82Q6UX34 121 aa2.39□□□□□ -2.03
VMP1-212ENST00000591782 UNQ9165/PRO28630Q6UXU0 137 aa2.39□□□□□ -2.03
VMP1-212ENST00000591782 FAM19A3Q7Z5A8 133 aa2.39□□□□□ -2.03
VMP1-212ENST00000591782 MARCH3Q86UD3 253 aa2.39□□□□□ -2.03
VMP1-212ENST00000591782 PCP2Q8IVA1 136 aa2.39□□□□□ -2.03
VMP1-212ENST00000591782 FAM216BQ8N7L0 139 aa2.39□□□□□ -2.03
VMP1-212ENST00000591782 Q8N8P6 123 aa2.39□□□□□ -2.03
VMP1-212ENST00000591782 DAND5Q8N907 189 aa2.39□□□□□ -2.03
VMP1-212ENST00000591782 LINC01006Q8NI28 216 aa2.39□□□□□ -2.03
VMP1-212ENST00000591782 UPK3BQ9BT76 320 aa2.39□□□□□ -2.03
VMP1-212ENST00000591782 NCOA6Q14686 2063 aaPredicted RBP2.38□□□□□ -2.03
VMP1-212ENST00000591782 TANC2Q9HCD6 1990 aa2.38□□□□□ -2.03
VMP1-212ENST00000591782 TRBV25-1A0A075B6N4 114 aa2.38□□□□□ -2.03
VMP1-212ENST00000591782 IGKV1D-8A0A087WSZ0 117 aa2.38□□□□□ -2.03
VMP1-212ENST00000591782 TMSB15BA0A087X1C1 80 aa2.38□□□□□ -2.03
VMP1-212ENST00000591782 IGKV1D-13A0A0B4J2D9 117 aa2.38□□□□□ -2.03
VMP1-212ENST00000591782 C19orf84I3L1E1 186 aa2.38□□□□□ -2.03
VMP1-212ENST00000591782 PEX7O00628 323 aa2.38□□□□□ -2.03
VMP1-212ENST00000591782 DNAL4O96015 105 aa2.38□□□□□ -2.03
VMP1-212ENST00000591782 IGLV3-27P01718 113 aa2.38□□□□□ -2.03
VMP1-212ENST00000591782 HMGN2P05204 90 aaKnown RBP2.38□□□□□ -2.03
VMP1-212ENST00000591782 PIRTP0C851 137 aa2.38□□□□□ -2.03
VMP1-212ENST00000591782 IGKV1-13P0DP09 117 aa2.38□□□□□ -2.03
VMP1-212ENST00000591782 PLNP26678 52 aa2.38□□□□□ -2.03
VMP1-212ENST00000591782 ZNF80P51504 273 aaPredicted RBP2.38□□□□□ -2.03
VMP1-212ENST00000591782 KLKP1Q107X0 134 aa2.38□□□□□ -2.03
VMP1-212ENST00000591782 LTBP1Q14766 1721 aa2.38□□□□□ -2.03
VMP1-212ENST00000591782 PRR4Q16378 134 aa2.38□□□□□ -2.03
VMP1-212ENST00000591782 ASB16-AS1Q495Z4 193 aa2.38□□□□□ -2.03
VMP1-212ENST00000591782 LINC01554Q52M75 96 aa2.38□□□□□ -2.03
VMP1-212ENST00000591782 CLEC2BQ92478 149 aa2.38□□□□□ -2.03
VMP1-212ENST00000591782 DIRC1Q969H9 104 aa2.38□□□□□ -2.03
VMP1-212ENST00000591782 CYYR1Q96J86 154 aa2.38□□□□□ -2.03
VMP1-212ENST00000591782 Q96M85 177 aa2.38□□□□□ -2.03
VMP1-212ENST00000591782 CXCL16Q9H2A7 254 aa2.38□□□□□ -2.03
VMP1-212ENST00000591782 TAC3Q9UHF0 121 aa2.38□□□□□ -2.03
VMP1-212ENST00000591782 THADAQ6YHU6 1953 aa2.38□□□□□ -2.03
VMP1-212ENST00000591782 KIAA1549LQ6ZVL6 1849 aa2.38□□□□□ -2.03
VMP1-212ENST00000591782 A0A0D9SEW6 157 aa2.37□□□□□ -2.03
VMP1-212ENST00000591782 A0A1W2PNU3 283 aaPredicted RBP2.37□□□□□ -2.03
VMP1-212ENST00000591782 LINC01549A6NIU2 74 aa2.37□□□□□ -2.03
VMP1-212ENST00000591782 IBA57-AS1B1ANH7 110 aa2.37□□□□□ -2.03
VMP1-212ENST00000591782 BUB1B-PAK6H3BSN5 160 aa2.37□□□□□ -2.03
VMP1-212ENST00000591782 IGHV3-23P01764 117 aa2.37□□□□□ -2.03
VMP1-212ENST00000591782 CD28P10747 220 aa2.37□□□□□ -2.03
VMP1-212ENST00000591782 SLC25A16P16260 332 aa2.37□□□□□ -2.03
VMP1-212ENST00000591782 SS18Q15532 418 aa2.37□□□□□ -2.03
VMP1-212ENST00000591782 Q1T7F1 81 aa2.37□□□□□ -2.03
VMP1-212ENST00000591782 C2orf83Q53S99 150 aa2.37□□□□□ -2.03
VMP1-212ENST00000591782 C1orf100Q5SVJ3 147 aa2.37□□□□□ -2.03
VMP1-212ENST00000591782 SDIM1Q6ZPB5 146 aa2.37□□□□□ -2.03
VMP1-212ENST00000591782 ZNF826PQ6ZT77 177 aa2.37□□□□□ -2.03
VMP1-212ENST00000591782 FP248Q71RG6 208 aaPredicted RBP2.37□□□□□ -2.03
VMP1-212ENST00000591782 MIR17HGQ75NE6 70 aa2.37□□□□□ -2.03
VMP1-212ENST00000591782 NDUFA11Q86Y39 141 aa2.37□□□□□ -2.03
VMP1-212ENST00000591782 CLECL1Q8IZS7 167 aa2.37□□□□□ -2.03
VMP1-212ENST00000591782 C11orf72Q8NBR9 251 aa2.37□□□□□ -2.03
VMP1-212ENST00000591782 RNF185Q96GF1 192 aa2.37□□□□□ -2.03
VMP1-212ENST00000591782 SCGB3A1Q96QR1 104 aa2.37□□□□□ -2.03
VMP1-212ENST00000591782 XAGE1AQ9HD64 81 aa2.37□□□□□ -2.03
VMP1-212ENST00000591782 SPRR3Q9UBC9 169 aa2.37□□□□□ -2.03
VMP1-212ENST00000591782 XCL2Q9UBD3 114 aa2.37□□□□□ -2.03
VMP1-212ENST00000591782 LINC00588Q9Y4M8 146 aa2.37□□□□□ -2.03
VMP1-212ENST00000591782 ZNF706Q9Y5V0 76 aaPredicted RBP2.37□□□□□ -2.03
VMP1-212ENST00000591782 TMEM14AQ9Y6G1 99 aa2.37□□□□□ -2.03
VMP1-212ENST00000591782 ATG2BQ96BY7 2078 aa2.37□□□□□ -2.03
VMP1-212ENST00000591782 USP34Q70CQ2 3546 aa2.37□□□□□ -2.03
VMP1-212ENST00000591782 PTPRSQ13332 1948 aa2.36□□□□□ -2.03
VMP1-212ENST00000591782 MYO7AQ13402 2215 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms