RNA–Protein interactions for RNA: ENST00000590260.5

DDX39A-212, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 988 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-212ENST00000590260 PRADC1Q9BSG0 188 aa12.36□□□□□ -0.43
DDX39A-212ENST00000590260 MED9Q9NWA0 146 aa12.36□□□□□ -0.43
DDX39A-212ENST00000590260 MUC21A0A0G2JKD1 596 aa12.35□□□□□ -0.43
DDX39A-212ENST00000590260 MUC21A0A140T8X8 626 aa12.35□□□□□ -0.43
DDX39A-212ENST00000590260 DNAH10OSP0CZ25 163 aa12.35□□□□□ -0.43
DDX39A-212ENST00000590260 ZFP82Q8N141 532 aa12.35□□□□□ -0.43
DDX39A-212ENST00000590260 GAGE12JA6NER3 117 aa12.34□□□□□ -0.43
DDX39A-212ENST00000590260 OR5AL1P0C617 328 aa12.34□□□□□ -0.43
DDX39A-212ENST00000590260 GZMBP10144 247 aa12.34□□□□□ -0.43
DDX39A-212ENST00000590260 GAGE1Q13065 139 aa12.34□□□□□ -0.43
DDX39A-212ENST00000590260 GAGE4Q13068 117 aa12.34□□□□□ -0.43
DDX39A-212ENST00000590260 GAGE5Q13069 117 aa12.34□□□□□ -0.43
DDX39A-212ENST00000590260 GAGE13Q4V321 117 aa12.34□□□□□ -0.43
DDX39A-212ENST00000590260 FAM74A4Q5TZK3 123 aa12.34□□□□□ -0.43
DDX39A-212ENST00000590260 SH2D6Q7Z4S9 175 aa12.34□□□□□ -0.43
DDX39A-212ENST00000590260 DNAH5Q8TE73 4624 aa12.34□□□□□ -0.43
DDX39A-212ENST00000590260 IGLC6P0CF74 106 aa12.33□□□□□ -0.44
DDX39A-212ENST00000590260 GNG4P50150 75 aa12.33□□□□□ -0.44
DDX39A-212ENST00000590260 LRP1BQ9NZR2 4599 aa12.32□□□□□ -0.44
DDX39A-212ENST00000590260 K7EN84 100 aa12.32□□□□□ -0.44
DDX39A-212ENST00000590260 RHODO00212 210 aa12.32□□□□□ -0.44
DDX39A-212ENST00000590260 BLOC1S1P78537 153 aa12.32□□□□□ -0.44
DDX39A-212ENST00000590260 ATP6V0E2Q8NHE4 81 aa12.32□□□□□ -0.44
DDX39A-212ENST00000590260 SMIM12Q96EX1 92 aa12.32□□□□□ -0.44
DDX39A-212ENST00000590260 LY96Q9Y6Y9 160 aa12.32□□□□□ -0.44
DDX39A-212ENST00000590260 RBFOX3A6NFN3 312 aa12.31□□□□□ -0.44
DDX39A-212ENST00000590260 BTF3P20290 206 aaKnown RBP12.31□□□□□ -0.44
DDX39A-212ENST00000590260 TAGLN2P37802 199 aaKnown RBP12.31□□□□□ -0.44
DDX39A-212ENST00000590260 Q8N3U1 123 aa12.31□□□□□ -0.44
DDX39A-212ENST00000590260 GTSF1LQ9H1H1 148 aa12.31□□□□□ -0.44
DDX39A-212ENST00000590260 KIF25-AS1Q9Y6Z4 181 aa12.31□□□□□ -0.44
DDX39A-212ENST00000590260 LELP1Q5T871 98 aa12.3□□□□□ -0.44
DDX39A-212ENST00000590260 OCC1Q8TAD7 63 aa12.3□□□□□ -0.44
DDX39A-212ENST00000590260 IGHV3-38A0A0C4DH36 116 aa12.29□□□□□ -0.44
DDX39A-212ENST00000590260 OR2D3Q8NGH3 330 aa12.29□□□□□ -0.44
DDX39A-212ENST00000590260 MSRB1Q9NZV6 116 aa12.29□□□□□ -0.44
DDX39A-212ENST00000590260 KRTAP10-2P60368 255 aa12.28□□□□□ -0.44
DDX39A-212ENST00000590260 SSTP61278 116 aa12.28□□□□□ -0.44
DDX39A-212ENST00000590260 LINC01556Q5JQF7 62 aa12.28□□□□□ -0.44
DDX39A-212ENST00000590260 NUDT10Q8NFP7 164 aa12.28□□□□□ -0.44
DDX39A-212ENST00000590260 NUDT11Q96G61 164 aa12.28□□□□□ -0.44
DDX39A-212ENST00000590260 RYR1P21817 5038 aa12.28□□□□□ -0.44
DDX39A-212ENST00000590260 TMEM250H0YL14 139 aa12.26□□□□□ -0.45
DDX39A-212ENST00000590260 EVI2AP22794 236 aa12.26□□□□□ -0.45
DDX39A-212ENST00000590260 OR10J3Q5JRS4 329 aa12.26□□□□□ -0.45
DDX39A-212ENST00000590260 TOR2AQ5JU69 321 aa12.26□□□□□ -0.45
DDX39A-212ENST00000590260 SPANXN1Q5VSR9 72 aa12.26□□□□□ -0.45
DDX39A-212ENST00000590260 FER1L6-AS1Q8NA97 138 aa12.26□□□□□ -0.45
DDX39A-212ENST00000590260 RNASE7Q9H1E1 156 aaKnown RBP12.26□□□□□ -0.45
DDX39A-212ENST00000590260 P01737 135 aa12.25□□□□□ -0.45
DDX39A-212ENST00000590260 RAB4BP61018 213 aa12.25□□□□□ -0.45
DDX39A-212ENST00000590260 UBE2D3P61077 147 aa12.25□□□□□ -0.45
DDX39A-212ENST00000590260 UBE2D2P62837 147 aa12.25□□□□□ -0.45
DDX39A-212ENST00000590260 NEXN-AS1Q8NBZ9 246 aa12.25□□□□□ -0.45
DDX39A-212ENST00000590260 DAZAP1Q96EP5 407 aaKnown RBP12.25□□□□□ -0.45
DDX39A-212ENST00000590260 FAM210AQ96ND0 272 aa12.25□□□□□ -0.45
DDX39A-212ENST00000590260 APOBP04114 4563 aaKnown RBP12.25□□□□□ -0.45
DDX39A-212ENST00000590260 TRAV8-6A0A0B4J262 113 aa12.24□□□□□ -0.45
DDX39A-212ENST00000590260 K7EP13 123 aa12.24□□□□□ -0.45
DDX39A-212ENST00000590260 IGHV3-30P01768 117 aa12.24□□□□□ -0.45
DDX39A-212ENST00000590260 IGHV3-33P01772 117 aa12.24□□□□□ -0.45
DDX39A-212ENST00000590260 IGHV3-30-3P0DP02 117 aa12.24□□□□□ -0.45
DDX39A-212ENST00000590260 IGHV3-30-5P0DP03 117 aa12.24□□□□□ -0.45
DDX39A-212ENST00000590260 RPS20P60866 119 aaKnown RBP12.24□□□□□ -0.45
DDX39A-212ENST00000590260 SPATA12Q7Z6I5 190 aa12.24□□□□□ -0.45
DDX39A-212ENST00000590260 OR10G8Q8NGN5 311 aa12.24□□□□□ -0.45
DDX39A-212ENST00000590260 TRAV9-2A0A087WT02 112 aa12.23□□□□□ -0.45
DDX39A-212ENST00000590260 TRBV10-1A0A0K0K1A3 114 aa12.23□□□□□ -0.45
DDX39A-212ENST00000590260 IBA57-AS1B1ANH7 110 aa12.23□□□□□ -0.45
DDX39A-212ENST00000590260 SRP19P09132 144 aaKnown RBP12.23□□□□□ -0.45
DDX39A-212ENST00000590260 ZNF56Q15929 161 aa12.23□□□□□ -0.45
DDX39A-212ENST00000590260 LYZL1Q6UWQ5 148 aa12.23□□□□□ -0.45
DDX39A-212ENST00000590260 TPPP3Q9BW30 176 aa12.23□□□□□ -0.45
DDX39A-212ENST00000590260 KRTAP17-1Q9BYP8 105 aa12.23□□□□□ -0.45
DDX39A-212ENST00000590260 HSPG2P98160 4391 aa12.23□□□□□ -0.45
DDX39A-212ENST00000590260 FUSP35637 526 aaKnown RBP eCLIP12.22□□□□□ -0.45
DDX39A-212ENST00000590260 GTSF1Q8WW33 167 aa12.22□□□□□ -0.45
DDX39A-212ENST00000590260 TRBV7-3A0A075B6L6 115 aa12.21□□□□□ -0.45
DDX39A-212ENST00000590260 NDUFS6O75380 124 aaKnown RBP12.21□□□□□ -0.45
DDX39A-212ENST00000590260 CTRLP40313 264 aa12.21□□□□□ -0.45
DDX39A-212ENST00000590260 TEX261Q6UWH6 196 aa12.21□□□□□ -0.45
DDX39A-212ENST00000590260 AP1S3Q96PC3 154 aa12.21□□□□□ -0.45
DDX39A-212ENST00000590260 RPP21Q9H633 154 aaKnown RBP12.21□□□□□ -0.45
DDX39A-212ENST00000590260 BIN3Q9NQY0 253 aa12.21□□□□□ -0.45
DDX39A-212ENST00000590260 C9JQL5 133 aa12.2□□□□□ -0.46
DDX39A-212ENST00000590260 DAZ4Q86SG3 579 aaKnown RBP12.2□□□□□ -0.46
DDX39A-212ENST00000590260 NFE4Q86UQ8 179 aa12.2□□□□□ -0.46
DDX39A-212ENST00000590260 C10orf126Q8N4M7 172 aa12.2□□□□□ -0.46
DDX39A-212ENST00000590260 CNFNQ9BYD5 112 aa12.2□□□□□ -0.46
DDX39A-212ENST00000590260 EIF5A2Q9GZV4 153 aaKnown RBP12.2□□□□□ -0.46
DDX39A-212ENST00000590260 DAZ3Q9NR90 486 aaKnown RBP12.2□□□□□ -0.46
DDX39A-212ENST00000590260 A0A087WTM6 91 aa12.19□□□□□ -0.46
DDX39A-212ENST00000590260 C16orf90A8MZG2 172 aa12.19□□□□□ -0.46
DDX39A-212ENST00000590260 NTF3P20783 257 aa12.19□□□□□ -0.46
DDX39A-212ENST00000590260 CEBPGP53567 150 aa12.19□□□□□ -0.46
DDX39A-212ENST00000590260 CACNG7P62955 275 aa12.19□□□□□ -0.46
DDX39A-212ENST00000590260 RPL36AP83881 106 aaKnown RBP12.19□□□□□ -0.46
DDX39A-212ENST00000590260 SRSF3P84103 164 aaKnown RBP12.19□□□□□ -0.46
DDX39A-212ENST00000590260 FAM231DQ6ZW35 169 aa12.19□□□□□ -0.46
DDX39A-212ENST00000590260 RPL36ALQ969Q0 106 aaKnown RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms