RNA–Protein interactions for RNA: ENST00000590215.1

MBD1-223, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 5

Gene MBD1, Length 749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-223ENST00000590215 Q6ZSN1 163 aa12.96□□□□□ -0.33
MBD1-223ENST00000590215 GATCO43716 136 aaKnown RBP12.95□□□□□ -0.34
MBD1-223ENST00000590215 ERVFC1-1P60608 527 aa12.95□□□□□ -0.34
MBD1-223ENST00000590215 RHOHQ15669 191 aa12.95□□□□□ -0.34
MBD1-223ENST00000590215 CT83Q5H943 113 aa12.95□□□□□ -0.34
MBD1-223ENST00000590215 SOHLH1Q5JUK2 328 aa12.95□□□□□ -0.34
MBD1-223ENST00000590215 WDR73Q6P4I2 378 aa12.95□□□□□ -0.34
MBD1-223ENST00000590215 PRADC1Q9BSG0 188 aa12.95□□□□□ -0.34
MBD1-223ENST00000590215 CNFNQ9BYD5 112 aa12.95□□□□□ -0.34
MBD1-223ENST00000590215 OSTCQ9NRP0 149 aa12.95□□□□□ -0.34
MBD1-223ENST00000590215 NAT8Q9UHE5 227 aa12.95□□□□□ -0.34
MBD1-223ENST00000590215 A0A087WWL8 130 aa12.94□□□□□ -0.34
MBD1-223ENST00000590215 MUC21A0A0G2JKD1 596 aa12.94□□□□□ -0.34
MBD1-223ENST00000590215 MUC21A0A140T8X8 626 aa12.94□□□□□ -0.34
MBD1-223ENST00000590215 CTRLP40313 264 aa12.94□□□□□ -0.34
MBD1-223ENST00000590215 RPL23P62829 140 aaKnown RBP12.94□□□□□ -0.34
MBD1-223ENST00000590215 CACNG7P62955 275 aa12.94□□□□□ -0.34
MBD1-223ENST00000590215 LYZL1Q6UWQ5 148 aa12.94□□□□□ -0.34
MBD1-223ENST00000590215 NEGR1Q7Z3B1 354 aa12.94□□□□□ -0.34
MBD1-223ENST00000590215 UPK3BQ9BT76 320 aa12.94□□□□□ -0.34
MBD1-223ENST00000590215 LOC100131303A0A0U1RQF7 123 aa12.93□□□□□ -0.34
MBD1-223ENST00000590215 SRIP30626 198 aa12.93□□□□□ -0.34
MBD1-223ENST00000590215 FAM74A4Q5TZK3 123 aa12.93□□□□□ -0.34
MBD1-223ENST00000590215 SH2D6Q7Z4S9 175 aa12.93□□□□□ -0.34
MBD1-223ENST00000590215 ZNRF2Q8NHG8 242 aa12.93□□□□□ -0.34
MBD1-223ENST00000590215 ISOC2Q96AB3 205 aa12.93□□□□□ -0.34
MBD1-223ENST00000590215 TPPP3Q9BW30 176 aa12.93□□□□□ -0.34
MBD1-223ENST00000590215 MRPS16Q9Y3D3 137 aaKnown RBP12.93□□□□□ -0.34
MBD1-223ENST00000590215 A8MWL6 223 aa12.92□□□□□ -0.34
MBD1-223ENST00000590215 FOXA3P55318 350 aaPredicted RBP12.92□□□□□ -0.34
MBD1-223ENST00000590215 LYPD5Q6UWN5 251 aa12.92□□□□□ -0.34
MBD1-223ENST00000590215 GTSF1Q8WW33 167 aa12.92□□□□□ -0.34
MBD1-223ENST00000590215 KIF25-AS1Q9Y6Z4 181 aa12.92□□□□□ -0.34
MBD1-223ENST00000590215 AP1S3Q96PC3 154 aa12.91□□□□□ -0.34
MBD1-223ENST00000590215 LINC00694P0DN24 101 aa12.9□□□□□ -0.34
MBD1-223ENST00000590215 TIRAPP58753 221 aa12.9□□□□□ -0.34
MBD1-223ENST00000590215 LINC00315P59091 139 aa12.9□□□□□ -0.34
MBD1-223ENST00000590215 C14orf178Q8N769 122 aaPredicted RBP12.9□□□□□ -0.34
MBD1-223ENST00000590215 MSRB1Q9NZV6 116 aa12.9□□□□□ -0.34
MBD1-223ENST00000590215 FAM231BA6NCW3 169 aa12.89□□□□□ -0.35
MBD1-223ENST00000590215 NTF3P20783 257 aa12.89□□□□□ -0.35
MBD1-223ENST00000590215 RAB4BP61018 213 aa12.89□□□□□ -0.35
MBD1-223ENST00000590215 SSTP61278 116 aa12.89□□□□□ -0.35
MBD1-223ENST00000590215 ADIRFQ15847 76 aa12.89□□□□□ -0.35
MBD1-223ENST00000590215 C15orf54Q8N8G6 183 aa12.89□□□□□ -0.35
MBD1-223ENST00000590215 TSKUQ8WUA8 353 aa12.89□□□□□ -0.35
MBD1-223ENST00000590215 GFRA4Q9GZZ7 299 aa12.89□□□□□ -0.35
MBD1-223ENST00000590215 V9GYV3 84 aa12.89□□□□□ -0.35
MBD1-223ENST00000590215 TRBV10-1A0A0K0K1A3 114 aa12.88□□□□□ -0.35
MBD1-223ENST00000590215 Q6ZR54 194 aa12.88□□□□□ -0.35
MBD1-223ENST00000590215 Q9H8V8 135 aa12.88□□□□□ -0.35
MBD1-223ENST00000590215 Q9UF83 564 aa12.88□□□□□ -0.35
MBD1-223ENST00000590215 UQCC3Q6UW78 93 aa12.87□□□□□ -0.35
MBD1-223ENST00000590215 TRGC1P0CF51 173 aa12.86□□□□□ -0.35
MBD1-223ENST00000590215 SMIM17P0DL12 118 aa12.86□□□□□ -0.35
MBD1-223ENST00000590215 OR10G8Q8NGN5 311 aa12.86□□□□□ -0.35
MBD1-223ENST00000590215 DNAH10Q8IVF4 4471 aa12.86□□□□□ -0.35
MBD1-223ENST00000590215 IGLV2-18A0A075B6J9 118 aa12.85□□□□□ -0.35
MBD1-223ENST00000590215 GAGE12JA6NER3 117 aa12.85□□□□□ -0.35
MBD1-223ENST00000590215 EVI2AP22794 236 aa12.85□□□□□ -0.35
MBD1-223ENST00000590215 GAGE1Q13065 139 aa12.85□□□□□ -0.35
MBD1-223ENST00000590215 GAGE4Q13068 117 aa12.85□□□□□ -0.35
MBD1-223ENST00000590215 GAGE5Q13069 117 aa12.85□□□□□ -0.35
MBD1-223ENST00000590215 ZNF56Q15929 161 aa12.85□□□□□ -0.35
MBD1-223ENST00000590215 GAGE13Q4V321 117 aa12.85□□□□□ -0.35
MBD1-223ENST00000590215 ATP6V0E2Q8NHE4 81 aa12.85□□□□□ -0.35
MBD1-223ENST00000590215 HIGD1CA8MV81 97 aa12.84□□□□□ -0.35
MBD1-223ENST00000590215 TWIST1Q15672 202 aa12.84□□□□□ -0.35
MBD1-223ENST00000590215 PGLYRP4Q96LB8 373 aa12.84□□□□□ -0.35
MBD1-223ENST00000590215 GTSF1LQ9H1H1 148 aa12.84□□□□□ -0.35
MBD1-223ENST00000590215 NBDYA0A0U1RRE5 68 aa12.83□□□□□ -0.36
MBD1-223ENST00000590215 PNRC1Q12796 327 aaPredicted RBP12.83□□□□□ -0.36
MBD1-223ENST00000590215 DPH3P1Q9H4G8 78 aa12.83□□□□□ -0.36
MBD1-223ENST00000590215 DNAH2Q9P225 4427 aa12.82□□□□□ -0.36
MBD1-223ENST00000590215 LINC00862A6NCI5 91 aa12.82□□□□□ -0.36
MBD1-223ENST00000590215 F5H697 171 aa12.82□□□□□ -0.36
MBD1-223ENST00000590215 M0R2N4 97 aa12.82□□□□□ -0.36
MBD1-223ENST00000590215 TRBV7-3A0A075B6L6 115 aa12.81□□□□□ -0.36
MBD1-223ENST00000590215 A0A1B0GUT8 65 aa12.81□□□□□ -0.36
MBD1-223ENST00000590215 SMIM27A0A1W2PRY6 76 aa12.81□□□□□ -0.36
MBD1-223ENST00000590215 M0QY20 66 aa12.81□□□□□ -0.36
MBD1-223ENST00000590215 SIVA1O15304 175 aa12.81□□□□□ -0.36
MBD1-223ENST00000590215 RPL36AP83881 106 aaKnown RBP12.81□□□□□ -0.36
MBD1-223ENST00000590215 NEXN-AS1Q8NBZ9 246 aa12.81□□□□□ -0.36
MBD1-223ENST00000590215 NUP35Q8NFH5 326 aa12.81□□□□□ -0.36
MBD1-223ENST00000590215 RPL36ALQ969Q0 106 aaKnown RBP12.81□□□□□ -0.36
MBD1-223ENST00000590215 TMEM218A2RU14 115 aa12.8□□□□□ -0.36
MBD1-223ENST00000590215 UBE2D3P61077 147 aa12.8□□□□□ -0.36
MBD1-223ENST00000590215 UBE2D2P62837 147 aa12.8□□□□□ -0.36
MBD1-223ENST00000590215 LELP1Q5T871 98 aa12.8□□□□□ -0.36
MBD1-223ENST00000590215 NAT8BQ9UHF3 227 aa12.8□□□□□ -0.36
MBD1-223ENST00000590215 TTC32Q5I0X7 151 aa12.79□□□□□ -0.36
MBD1-223ENST00000590215 SUMO4Q6EEV6 95 aa12.79□□□□□ -0.36
MBD1-223ENST00000590215 COMMD7Q86VX2 200 aa12.79□□□□□ -0.36
MBD1-223ENST00000590215 BORCS7Q96B45 105 aa12.79□□□□□ -0.36
MBD1-223ENST00000590215 H7C1H1 209 aa12.78□□□□□ -0.36
MBD1-223ENST00000590215 MGPP08493 103 aa12.78□□□□□ -0.36
MBD1-223ENST00000590215 ADCYAP1P18509 176 aa12.78□□□□□ -0.36
MBD1-223ENST00000590215 WFDC10BQ8IUB3 73 aa12.78□□□□□ -0.36
MBD1-223ENST00000590215 KRTAP1-5Q9BYS1 174 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms