RNA–Protein interactions for RNA: ENST00000590171.1

CIRBP-226, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-226ENST00000590171 CCL20P78556 96 aa13.86□□□□□ -0.19
CIRBP-226ENST00000590171 KRTAP4-5Q9BYR2 181 aa13.86□□□□□ -0.19
CIRBP-226ENST00000590171 ABCA13Q86UQ4 5058 aa13.86□□□□□ -0.19
CIRBP-226ENST00000590171 RPL19P84098 196 aaKnown RBP13.85□□□□□ -0.19
CIRBP-226ENST00000590171 FAM74A4Q5TZK3 123 aa13.85□□□□□ -0.19
CIRBP-226ENST00000590171 AKAP14Q86UN6 197 aa13.85□□□□□ -0.19
CIRBP-226ENST00000590171 BAGE2Q86Y30 109 aa13.85□□□□□ -0.19
CIRBP-226ENST00000590171 SFRP2Q96HF1 295 aa13.85□□□□□ -0.19
CIRBP-226ENST00000590171 A0A087WWL8 130 aa13.84□□□□□ -0.19
CIRBP-226ENST00000590171 IBA57-AS1B1ANH7 110 aa13.84□□□□□ -0.19
CIRBP-226ENST00000590171 IGHV3-30P01768 117 aa13.84□□□□□ -0.19
CIRBP-226ENST00000590171 IGHV3-33P01772 117 aa13.84□□□□□ -0.19
CIRBP-226ENST00000590171 C1QBP02746 253 aa13.84□□□□□ -0.19
CIRBP-226ENST00000590171 IGHV3-30-3P0DP02 117 aa13.84□□□□□ -0.19
CIRBP-226ENST00000590171 IGHV3-30-5P0DP03 117 aa13.84□□□□□ -0.19
CIRBP-226ENST00000590171 ZFP82Q8N141 532 aa13.84□□□□□ -0.19
CIRBP-226ENST00000590171 PGPEP1Q9NXJ5 209 aa13.84□□□□□ -0.19
CIRBP-226ENST00000590171 GNG13Q9P2W3 67 aa13.84□□□□□ -0.19
CIRBP-226ENST00000590171 BOLA1Q9Y3E2 137 aa13.84□□□□□ -0.19
CIRBP-226ENST00000590171 MANBALQ9NQG1 85 aa13.83□□□□□ -0.2
CIRBP-226ENST00000590171 TRAV1-1A0A0B4J248 108 aa13.82□□□□□ -0.2
CIRBP-226ENST00000590171 RAB5CP51148 216 aa13.82□□□□□ -0.2
CIRBP-226ENST00000590171 MAPKAPK5-AS1Q8N8E1 139 aa13.82□□□□□ -0.2
CIRBP-226ENST00000590171 CXCL1P09341 107 aa13.81□□□□□ -0.2
CIRBP-226ENST00000590171 RPL35P42766 123 aaKnown RBP13.81□□□□□ -0.2
CIRBP-226ENST00000590171 EIF5AL1Q6IS14 154 aaKnown RBP13.81□□□□□ -0.2
CIRBP-226ENST00000590171 PRR27Q6MZM9 219 aa13.81□□□□□ -0.2
CIRBP-226ENST00000590171 CDPF1Q6NVV7 123 aa13.81□□□□□ -0.2
CIRBP-226ENST00000590171 Q8N3U1 123 aa13.81□□□□□ -0.2
CIRBP-226ENST00000590171 C11orf52Q96A22 123 aa13.81□□□□□ -0.2
CIRBP-226ENST00000590171 DERL1Q9BUN8 251 aa13.81□□□□□ -0.2
CIRBP-226ENST00000590171 Q9HAA7 133 aa13.81□□□□□ -0.2
CIRBP-226ENST00000590171 SULT1A2P50226 295 aa13.8□□□□□ -0.2
CIRBP-226ENST00000590171 OR10AG1Q8NH19 301 aa13.8□□□□□ -0.2
CIRBP-226ENST00000590171 SNAI2O43623 268 aa13.78□□□□□ -0.2
CIRBP-226ENST00000590171 PSCAO43653 123 aa13.78□□□□□ -0.2
CIRBP-226ENST00000590171 A0A087WWC5 75 aa13.77□□□□□ -0.21
CIRBP-226ENST00000590171 LRCOL1A6NCL2 159 aa13.77□□□□□ -0.21
CIRBP-226ENST00000590171 TEX46H3BTG2 121 aa13.77□□□□□ -0.21
CIRBP-226ENST00000590171 LAGE3Q14657 143 aa13.77□□□□□ -0.21
CIRBP-226ENST00000590171 SLC51BQ86UW2 128 aa13.77□□□□□ -0.21
CIRBP-226ENST00000590171 SSBP4Q9BWG4 385 aaPredicted RBP13.77□□□□□ -0.21
CIRBP-226ENST00000590171 CENPWQ5EE01 88 aa13.76□□□□□ -0.21
CIRBP-226ENST00000590171 MUC21A0A0G2JKD1 596 aa13.75□□□□□ -0.21
CIRBP-226ENST00000590171 TRBV10-1A0A0K0K1A3 114 aa13.75□□□□□ -0.21
CIRBP-226ENST00000590171 MUC21A0A140T8X8 626 aa13.75□□□□□ -0.21
CIRBP-226ENST00000590171 IGLV2-8P01709 118 aa13.75□□□□□ -0.21
CIRBP-226ENST00000590171 OR5AL1P0C617 328 aa13.75□□□□□ -0.21
CIRBP-226ENST00000590171 DAZ4Q86SG3 579 aaKnown RBP13.75□□□□□ -0.21
CIRBP-226ENST00000590171 Q8N1X5 172 aa13.75□□□□□ -0.21
CIRBP-226ENST00000590171 DAZ3Q9NR90 486 aaKnown RBP13.75□□□□□ -0.21
CIRBP-226ENST00000590171 MEF2BQ02080 365 aaPredicted RBP13.74□□□□□ -0.21
CIRBP-226ENST00000590171 KRTAP10-1P60331 282 aa13.73□□□□□ -0.21
CIRBP-226ENST00000590171 RAB4BP61018 213 aa13.73□□□□□ -0.21
CIRBP-226ENST00000590171 UBE2D3P61077 147 aa13.73□□□□□ -0.21
CIRBP-226ENST00000590171 UBE2D2P62837 147 aa13.73□□□□□ -0.21
CIRBP-226ENST00000590171 RPL36AP83881 106 aaKnown RBP13.73□□□□□ -0.21
CIRBP-226ENST00000590171 ZNF56Q15929 161 aa13.73□□□□□ -0.21
CIRBP-226ENST00000590171 SPANXN1Q5VSR9 72 aa13.73□□□□□ -0.21
CIRBP-226ENST00000590171 C9orf62Q8N4C0 152 aa13.73□□□□□ -0.21
CIRBP-226ENST00000590171 RPL36ALQ969Q0 106 aaKnown RBP13.73□□□□□ -0.21
CIRBP-226ENST00000590171 TRBV7-3A0A075B6L6 115 aa13.72□□□□□ -0.21
CIRBP-226ENST00000590171 RAB19A4D1S5 217 aa13.72□□□□□ -0.21
CIRBP-226ENST00000590171 IFNA1P01562 189 aa13.72□□□□□ -0.21
CIRBP-226ENST00000590171 SSTP61278 116 aa13.72□□□□□ -0.21
CIRBP-226ENST00000590171 NIT1Q86X76 327 aa13.72□□□□□ -0.21
CIRBP-226ENST00000590171 OR10G8Q8NGN5 311 aa13.72□□□□□ -0.21
CIRBP-226ENST00000590171 PDE6DO43924 150 aa13.71□□□□□ -0.21
CIRBP-226ENST00000590171 BCL2P10415 239 aa13.71□□□□□ -0.21
CIRBP-226ENST00000590171 TRBV20OR9-2A0A075B6H5 130 aa13.7□□□□□ -0.22
CIRBP-226ENST00000590171 A0A1B0GVG6 124 aa13.7□□□□□ -0.22
CIRBP-226ENST00000590171 C19orf71A6NCJ1 209 aa13.7□□□□□ -0.22
CIRBP-226ENST00000590171 GZMBP10144 247 aa13.7□□□□□ -0.22
CIRBP-226ENST00000590171 GNG4P50150 75 aa13.7□□□□□ -0.22
CIRBP-226ENST00000590171 Q8N814 137 aa13.7□□□□□ -0.22
CIRBP-226ENST00000590171 NEXN-AS1Q8NBZ9 246 aa13.7□□□□□ -0.22
CIRBP-226ENST00000590171 SMIM12Q96EX1 92 aa13.7□□□□□ -0.22
CIRBP-226ENST00000590171 TM2D2Q9BX73 214 aa13.7□□□□□ -0.22
CIRBP-226ENST00000590171 MED9Q9NWA0 146 aa13.7□□□□□ -0.22
CIRBP-226ENST00000590171 TRAV8-3A0A0A6YYJ7 113 aa13.69□□□□□ -0.22
CIRBP-226ENST00000590171 IGLC6P0CF74 106 aa13.69□□□□□ -0.22
CIRBP-226ENST00000590171 GCSHP23434 173 aa13.69□□□□□ -0.22
CIRBP-226ENST00000590171 XGP55808 180 aa13.69□□□□□ -0.22
CIRBP-226ENST00000590171 OR2D3Q8NGH3 330 aa13.69□□□□□ -0.22
CIRBP-226ENST00000590171 DAZAP1Q96EP5 407 aaKnown RBP13.69□□□□□ -0.22
CIRBP-226ENST00000590171 VAX2Q9UIW0 290 aa13.69□□□□□ -0.22
CIRBP-226ENST00000590171 KIF25-AS1Q9Y6Z4 181 aa13.69□□□□□ -0.22
CIRBP-226ENST00000590171 IGLV5-52A0A0A0MRZ9 124 aa13.68□□□□□ -0.22
CIRBP-226ENST00000590171 WFDC2Q14508 124 aa13.68□□□□□ -0.22
CIRBP-226ENST00000590171 TOR2AQ5JU69 321 aa13.68□□□□□ -0.22
CIRBP-226ENST00000590171 NTN5Q8WTR8 489 aaPredicted RBP13.68□□□□□ -0.22
CIRBP-226ENST00000590171 AP1S3Q96PC3 154 aa13.68□□□□□ -0.22
CIRBP-226ENST00000590171 TPPP3Q9BW30 176 aa13.68□□□□□ -0.22
CIRBP-226ENST00000590171 URGCP-MRPS24S4R325 110 aa13.68□□□□□ -0.22
CIRBP-226ENST00000590171 RBFOX3A6NFN3 312 aa13.67□□□□□ -0.22
CIRBP-226ENST00000590171 RPS20P60866 119 aaKnown RBP13.67□□□□□ -0.22
CIRBP-226ENST00000590171 FER1L6-AS1Q8NA97 138 aa13.67□□□□□ -0.22
CIRBP-226ENST00000590171 F5H697 171 aa13.66□□□□□ -0.22
CIRBP-226ENST00000590171 DNAJC30Q96LL9 226 aa13.66□□□□□ -0.22
CIRBP-226ENST00000590171 KLK12Q9UKR0 248 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms