RNA–Protein interactions for RNA: ENST00000590171.1

CIRBP-226, Transcript of cold inducible RNA binding protein, human

TSL 3

Gene CIRBP, Length 905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-226	ENST00000590171	CCL20	P78556	96 aa		13.86	□□□□□ -0.19
CIRBP-226	ENST00000590171	KRTAP4-5	Q9BYR2	181 aa		13.86	□□□□□ -0.19
CIRBP-226	ENST00000590171	ABCA13	Q86UQ4	5058 aa		13.86	□□□□□ -0.19
CIRBP-226	ENST00000590171	RPL19	P84098	196 aa	Known RBP	13.85	□□□□□ -0.19
CIRBP-226	ENST00000590171	FAM74A4	Q5TZK3	123 aa		13.85	□□□□□ -0.19
CIRBP-226	ENST00000590171	AKAP14	Q86UN6	197 aa		13.85	□□□□□ -0.19
CIRBP-226	ENST00000590171	BAGE2	Q86Y30	109 aa		13.85	□□□□□ -0.19
CIRBP-226	ENST00000590171	SFRP2	Q96HF1	295 aa		13.85	□□□□□ -0.19
CIRBP-226	ENST00000590171		A0A087WWL8	130 aa		13.84	□□□□□ -0.19
CIRBP-226	ENST00000590171	IBA57-AS1	B1ANH7	110 aa		13.84	□□□□□ -0.19
CIRBP-226	ENST00000590171	IGHV3-30	P01768	117 aa		13.84	□□□□□ -0.19
CIRBP-226	ENST00000590171	IGHV3-33	P01772	117 aa		13.84	□□□□□ -0.19
CIRBP-226	ENST00000590171	C1QB	P02746	253 aa		13.84	□□□□□ -0.19
CIRBP-226	ENST00000590171	IGHV3-30-3	P0DP02	117 aa		13.84	□□□□□ -0.19
CIRBP-226	ENST00000590171	IGHV3-30-5	P0DP03	117 aa		13.84	□□□□□ -0.19
CIRBP-226	ENST00000590171	ZFP82	Q8N141	532 aa		13.84	□□□□□ -0.19
CIRBP-226	ENST00000590171	PGPEP1	Q9NXJ5	209 aa		13.84	□□□□□ -0.19
CIRBP-226	ENST00000590171	GNG13	Q9P2W3	67 aa		13.84	□□□□□ -0.19
CIRBP-226	ENST00000590171	BOLA1	Q9Y3E2	137 aa		13.84	□□□□□ -0.19
CIRBP-226	ENST00000590171	MANBAL	Q9NQG1	85 aa		13.83	□□□□□ -0.2
CIRBP-226	ENST00000590171	TRAV1-1	A0A0B4J248	108 aa		13.82	□□□□□ -0.2
CIRBP-226	ENST00000590171	RAB5C	P51148	216 aa		13.82	□□□□□ -0.2
CIRBP-226	ENST00000590171	MAPKAPK5-AS1	Q8N8E1	139 aa		13.82	□□□□□ -0.2
CIRBP-226	ENST00000590171	CXCL1	P09341	107 aa		13.81	□□□□□ -0.2
CIRBP-226	ENST00000590171	RPL35	P42766	123 aa	Known RBP	13.81	□□□□□ -0.2
CIRBP-226	ENST00000590171	EIF5AL1	Q6IS14	154 aa	Known RBP	13.81	□□□□□ -0.2
CIRBP-226	ENST00000590171	PRR27	Q6MZM9	219 aa		13.81	□□□□□ -0.2
CIRBP-226	ENST00000590171	CDPF1	Q6NVV7	123 aa		13.81	□□□□□ -0.2
CIRBP-226	ENST00000590171		Q8N3U1	123 aa		13.81	□□□□□ -0.2
CIRBP-226	ENST00000590171	C11orf52	Q96A22	123 aa		13.81	□□□□□ -0.2
CIRBP-226	ENST00000590171	DERL1	Q9BUN8	251 aa		13.81	□□□□□ -0.2
CIRBP-226	ENST00000590171		Q9HAA7	133 aa		13.81	□□□□□ -0.2
CIRBP-226	ENST00000590171	SULT1A2	P50226	295 aa		13.8	□□□□□ -0.2
CIRBP-226	ENST00000590171	OR10AG1	Q8NH19	301 aa		13.8	□□□□□ -0.2
CIRBP-226	ENST00000590171	SNAI2	O43623	268 aa		13.78	□□□□□ -0.2
CIRBP-226	ENST00000590171	PSCA	O43653	123 aa		13.78	□□□□□ -0.2
CIRBP-226	ENST00000590171		A0A087WWC5	75 aa		13.77	□□□□□ -0.21
CIRBP-226	ENST00000590171	LRCOL1	A6NCL2	159 aa		13.77	□□□□□ -0.21
CIRBP-226	ENST00000590171	TEX46	H3BTG2	121 aa		13.77	□□□□□ -0.21
CIRBP-226	ENST00000590171	LAGE3	Q14657	143 aa		13.77	□□□□□ -0.21
CIRBP-226	ENST00000590171	SLC51B	Q86UW2	128 aa		13.77	□□□□□ -0.21
CIRBP-226	ENST00000590171	SSBP4	Q9BWG4	385 aa	Predicted RBP	13.77	□□□□□ -0.21
CIRBP-226	ENST00000590171	CENPW	Q5EE01	88 aa		13.76	□□□□□ -0.21
CIRBP-226	ENST00000590171	MUC21	A0A0G2JKD1	596 aa		13.75	□□□□□ -0.21
CIRBP-226	ENST00000590171	TRBV10-1	A0A0K0K1A3	114 aa		13.75	□□□□□ -0.21
CIRBP-226	ENST00000590171	MUC21	A0A140T8X8	626 aa		13.75	□□□□□ -0.21
CIRBP-226	ENST00000590171	IGLV2-8	P01709	118 aa		13.75	□□□□□ -0.21
CIRBP-226	ENST00000590171	OR5AL1	P0C617	328 aa		13.75	□□□□□ -0.21
CIRBP-226	ENST00000590171	DAZ4	Q86SG3	579 aa	Known RBP	13.75	□□□□□ -0.21
CIRBP-226	ENST00000590171		Q8N1X5	172 aa		13.75	□□□□□ -0.21
CIRBP-226	ENST00000590171	DAZ3	Q9NR90	486 aa	Known RBP	13.75	□□□□□ -0.21
CIRBP-226	ENST00000590171	MEF2B	Q02080	365 aa	Predicted RBP	13.74	□□□□□ -0.21
CIRBP-226	ENST00000590171	KRTAP10-1	P60331	282 aa		13.73	□□□□□ -0.21
CIRBP-226	ENST00000590171	RAB4B	P61018	213 aa		13.73	□□□□□ -0.21
CIRBP-226	ENST00000590171	UBE2D3	P61077	147 aa		13.73	□□□□□ -0.21
CIRBP-226	ENST00000590171	UBE2D2	P62837	147 aa		13.73	□□□□□ -0.21
CIRBP-226	ENST00000590171	RPL36A	P83881	106 aa	Known RBP	13.73	□□□□□ -0.21
CIRBP-226	ENST00000590171	ZNF56	Q15929	161 aa		13.73	□□□□□ -0.21
CIRBP-226	ENST00000590171	SPANXN1	Q5VSR9	72 aa		13.73	□□□□□ -0.21
CIRBP-226	ENST00000590171	C9orf62	Q8N4C0	152 aa		13.73	□□□□□ -0.21
CIRBP-226	ENST00000590171	RPL36AL	Q969Q0	106 aa	Known RBP	13.73	□□□□□ -0.21
CIRBP-226	ENST00000590171	TRBV7-3	A0A075B6L6	115 aa		13.72	□□□□□ -0.21
CIRBP-226	ENST00000590171	RAB19	A4D1S5	217 aa		13.72	□□□□□ -0.21
CIRBP-226	ENST00000590171	IFNA1	P01562	189 aa		13.72	□□□□□ -0.21
CIRBP-226	ENST00000590171	SST	P61278	116 aa		13.72	□□□□□ -0.21
CIRBP-226	ENST00000590171	NIT1	Q86X76	327 aa		13.72	□□□□□ -0.21
CIRBP-226	ENST00000590171	OR10G8	Q8NGN5	311 aa		13.72	□□□□□ -0.21
CIRBP-226	ENST00000590171	PDE6D	O43924	150 aa		13.71	□□□□□ -0.21
CIRBP-226	ENST00000590171	BCL2	P10415	239 aa		13.71	□□□□□ -0.21
CIRBP-226	ENST00000590171	TRBV20OR9-2	A0A075B6H5	130 aa		13.7	□□□□□ -0.22
CIRBP-226	ENST00000590171		A0A1B0GVG6	124 aa		13.7	□□□□□ -0.22
CIRBP-226	ENST00000590171	C19orf71	A6NCJ1	209 aa		13.7	□□□□□ -0.22
CIRBP-226	ENST00000590171	GZMB	P10144	247 aa		13.7	□□□□□ -0.22
CIRBP-226	ENST00000590171	GNG4	P50150	75 aa		13.7	□□□□□ -0.22
CIRBP-226	ENST00000590171		Q8N814	137 aa		13.7	□□□□□ -0.22
CIRBP-226	ENST00000590171	NEXN-AS1	Q8NBZ9	246 aa		13.7	□□□□□ -0.22
CIRBP-226	ENST00000590171	SMIM12	Q96EX1	92 aa		13.7	□□□□□ -0.22
CIRBP-226	ENST00000590171	TM2D2	Q9BX73	214 aa		13.7	□□□□□ -0.22
CIRBP-226	ENST00000590171	MED9	Q9NWA0	146 aa		13.7	□□□□□ -0.22
CIRBP-226	ENST00000590171	TRAV8-3	A0A0A6YYJ7	113 aa		13.69	□□□□□ -0.22
CIRBP-226	ENST00000590171	IGLC6	P0CF74	106 aa		13.69	□□□□□ -0.22
CIRBP-226	ENST00000590171	GCSH	P23434	173 aa		13.69	□□□□□ -0.22
CIRBP-226	ENST00000590171	XG	P55808	180 aa		13.69	□□□□□ -0.22
CIRBP-226	ENST00000590171	OR2D3	Q8NGH3	330 aa		13.69	□□□□□ -0.22
CIRBP-226	ENST00000590171	DAZAP1	Q96EP5	407 aa	Known RBP	13.69	□□□□□ -0.22
CIRBP-226	ENST00000590171	VAX2	Q9UIW0	290 aa		13.69	□□□□□ -0.22
CIRBP-226	ENST00000590171	KIF25-AS1	Q9Y6Z4	181 aa		13.69	□□□□□ -0.22
CIRBP-226	ENST00000590171	IGLV5-52	A0A0A0MRZ9	124 aa		13.68	□□□□□ -0.22
CIRBP-226	ENST00000590171	WFDC2	Q14508	124 aa		13.68	□□□□□ -0.22
CIRBP-226	ENST00000590171	TOR2A	Q5JU69	321 aa		13.68	□□□□□ -0.22
CIRBP-226	ENST00000590171	NTN5	Q8WTR8	489 aa	Predicted RBP	13.68	□□□□□ -0.22
CIRBP-226	ENST00000590171	AP1S3	Q96PC3	154 aa		13.68	□□□□□ -0.22
CIRBP-226	ENST00000590171	TPPP3	Q9BW30	176 aa		13.68	□□□□□ -0.22
CIRBP-226	ENST00000590171	URGCP-MRPS24	S4R325	110 aa		13.68	□□□□□ -0.22
CIRBP-226	ENST00000590171	RBFOX3	A6NFN3	312 aa		13.67	□□□□□ -0.22
CIRBP-226	ENST00000590171	RPS20	P60866	119 aa	Known RBP	13.67	□□□□□ -0.22
CIRBP-226	ENST00000590171	FER1L6-AS1	Q8NA97	138 aa		13.67	□□□□□ -0.22
CIRBP-226	ENST00000590171		F5H697	171 aa		13.66	□□□□□ -0.22
CIRBP-226	ENST00000590171	DNAJC30	Q96LL9	226 aa		13.66	□□□□□ -0.22
CIRBP-226	ENST00000590171	KLK12	Q9UKR0	248 aa		13.66	□□□□□ -0.22

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