RNA–Protein interactions for RNA: ENST00000590055.1

AP001269.2-201, humanhuman

TSL 3 BASIC

Gene AP001269.2, Length 379 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001269.2-201ENST00000590055 SSBP4Q9BWG4 385 aaPredicted RBP9.46□□□□□ -0.9
AP001269.2-201ENST00000590055 BIN3Q9NQY0 253 aa9.46□□□□□ -0.9
AP001269.2-201ENST00000590055 EPPK1P58107 5090 aaKnown RBP9.46□□□□□ -0.9
AP001269.2-201ENST00000590055 GAGE12JA6NER3 117 aa9.45□□□□□ -0.9
AP001269.2-201ENST00000590055 PRSS29PA6NIE9 313 aa9.45□□□□□ -0.9
AP001269.2-201ENST00000590055 RHODO00212 210 aa9.45□□□□□ -0.9
AP001269.2-201ENST00000590055 GAGE1Q13065 139 aa9.45□□□□□ -0.9
AP001269.2-201ENST00000590055 GAGE4Q13068 117 aa9.45□□□□□ -0.9
AP001269.2-201ENST00000590055 GAGE5Q13069 117 aa9.45□□□□□ -0.9
AP001269.2-201ENST00000590055 GAGE13Q4V321 117 aa9.45□□□□□ -0.9
AP001269.2-201ENST00000590055 WFDC10BQ8IUB3 73 aa9.45□□□□□ -0.9
AP001269.2-201ENST00000590055 RNASE7Q9H1E1 156 aaKnown RBP9.45□□□□□ -0.9
AP001269.2-201ENST00000590055 DNAH2Q9P225 4427 aa9.45□□□□□ -0.9
AP001269.2-201ENST00000590055 FRAS1Q86XX4 4008 aa9.45□□□□□ -0.9
AP001269.2-201ENST00000590055 SRP19P09132 144 aaKnown RBP9.44□□□□□ -0.9
AP001269.2-201ENST00000590055 IGLC6P0CF74 106 aa9.44□□□□□ -0.9
AP001269.2-201ENST00000590055 RPS20P60866 119 aaKnown RBP9.44□□□□□ -0.9
AP001269.2-201ENST00000590055 SOHLH1Q5JUK2 328 aa9.44□□□□□ -0.9
AP001269.2-201ENST00000590055 LINC00336Q6ZUF6 198 aa9.44□□□□□ -0.9
AP001269.2-201ENST00000590055 SH2D6Q7Z4S9 175 aa9.44□□□□□ -0.9
AP001269.2-201ENST00000590055 C6orf223Q8N319 242 aa9.44□□□□□ -0.9
AP001269.2-201ENST00000590055 FER1L6-AS1Q8NA97 138 aa9.44□□□□□ -0.9
AP001269.2-201ENST00000590055 TTC32Q5I0X7 151 aa9.43□□□□□ -0.9
AP001269.2-201ENST00000590055 ATP6V0E2Q8NHE4 81 aa9.43□□□□□ -0.9
AP001269.2-201ENST00000590055 SMIM7Q9BQ49 75 aa9.43□□□□□ -0.9
AP001269.2-201ENST00000590055 XKRY2A2RUG3 117 aa9.42□□□□□ -0.9
AP001269.2-201ENST00000590055 ZNF56Q15929 161 aa9.42□□□□□ -0.9
AP001269.2-201ENST00000590055 RPP21Q9H633 154 aaKnown RBP9.42□□□□□ -0.9
AP001269.2-201ENST00000590055 MSRB1Q9NZV6 116 aa9.42□□□□□ -0.9
AP001269.2-201ENST00000590055 A0A1W2PPQ1 181 aa9.41□□□□□ -0.9
AP001269.2-201ENST00000590055 ZNF727A8MUV8 499 aa9.41□□□□□ -0.9
AP001269.2-201ENST00000590055 C9JQL5 133 aa9.41□□□□□ -0.9
AP001269.2-201ENST00000590055 SRSF3P84103 164 aaKnown RBP9.41□□□□□ -0.9
AP001269.2-201ENST00000590055 LYZL1Q6UWQ5 148 aa9.41□□□□□ -0.9
AP001269.2-201ENST00000590055 LY96Q9Y6Y9 160 aa9.41□□□□□ -0.9
AP001269.2-201ENST00000590055 F5H697 171 aa9.4□□□□□ -0.9
AP001269.2-201ENST00000590055 NDUFS6O75380 124 aaKnown RBP9.4□□□□□ -0.9
AP001269.2-201ENST00000590055 LINC00694P0DN24 101 aa9.4□□□□□ -0.9
AP001269.2-201ENST00000590055 TIRAPP58753 221 aa9.4□□□□□ -0.9
AP001269.2-201ENST00000590055 OR10J3Q5JRS4 329 aa9.4□□□□□ -0.9
AP001269.2-201ENST00000590055 GTSF1LQ9H1H1 148 aa9.4□□□□□ -0.9
AP001269.2-201ENST00000590055 TNFRSF18Q9Y5U5 241 aa9.4□□□□□ -0.9
AP001269.2-201ENST00000590055 A0A1B0GVY2 172 aa9.39□□□□□ -0.91
AP001269.2-201ENST00000590055 F2Z2F3 143 aa9.39□□□□□ -0.91
AP001269.2-201ENST00000590055 GATCO43716 136 aaKnown RBP9.39□□□□□ -0.91
AP001269.2-201ENST00000590055 SMIM17P0DL12 118 aa9.39□□□□□ -0.91
AP001269.2-201ENST00000590055 LINC00315P59091 139 aa9.39□□□□□ -0.91
AP001269.2-201ENST00000590055 ERVFC1-1P60608 527 aa9.39□□□□□ -0.91
AP001269.2-201ENST00000590055 RAB4BP61018 213 aa9.39□□□□□ -0.91
AP001269.2-201ENST00000590055 CACNG7P62955 275 aa9.39□□□□□ -0.91
AP001269.2-201ENST00000590055 TNP2Q05952 138 aa9.39□□□□□ -0.91
AP001269.2-201ENST00000590055 LINC01551Q86U37 167 aa9.39□□□□□ -0.91
AP001269.2-201ENST00000590055 AP1S3Q96PC3 154 aa9.39□□□□□ -0.91
AP001269.2-201ENST00000590055 KIF25-AS1Q9Y6Z4 181 aa9.39□□□□□ -0.91
AP001269.2-201ENST00000590055 DNAH17Q9UFH2 4485 aa9.39□□□□□ -0.91
AP001269.2-201ENST00000590055 TRAV8-6A0A0B4J262 113 aa9.38□□□□□ -0.91
AP001269.2-201ENST00000590055 MGPP08493 103 aa9.38□□□□□ -0.91
AP001269.2-201ENST00000590055 DNAH10OSP0CZ25 163 aa9.38□□□□□ -0.91
AP001269.2-201ENST00000590055 NTF3P20783 257 aa9.38□□□□□ -0.91
AP001269.2-201ENST00000590055 EVI2AP22794 236 aa9.38□□□□□ -0.91
AP001269.2-201ENST00000590055 PEA15Q15121 130 aa9.38□□□□□ -0.91
AP001269.2-201ENST00000590055 LELP1Q5T871 98 aa9.38□□□□□ -0.91
AP001269.2-201ENST00000590055 TRAV9-2A0A087WT02 112 aa9.37□□□□□ -0.91
AP001269.2-201ENST00000590055 IGHV3-38A0A0C4DH36 116 aa9.37□□□□□ -0.91
AP001269.2-201ENST00000590055 TRBV10-1A0A0K0K1A3 114 aa9.37□□□□□ -0.91
AP001269.2-201ENST00000590055 CTRLP40313 264 aa9.37□□□□□ -0.91
AP001269.2-201ENST00000590055 RPL36AP83881 106 aaKnown RBP9.37□□□□□ -0.91
AP001269.2-201ENST00000590055 FAM231DQ6ZW35 169 aa9.37□□□□□ -0.91
AP001269.2-201ENST00000590055 GTSF1Q8WW33 167 aa9.37□□□□□ -0.91
AP001269.2-201ENST00000590055 RPL36ALQ969Q0 106 aaKnown RBP9.37□□□□□ -0.91
AP001269.2-201ENST00000590055 FAT2Q9NYQ8 4349 aa9.37□□□□□ -0.91
AP001269.2-201ENST00000590055 TRBV7-3A0A075B6L6 115 aa9.36□□□□□ -0.91
AP001269.2-201ENST00000590055 IGHV3-30P01768 117 aa9.36□□□□□ -0.91
AP001269.2-201ENST00000590055 IGHV3-33P01772 117 aa9.36□□□□□ -0.91
AP001269.2-201ENST00000590055 IGHV3-30-3P0DP02 117 aa9.36□□□□□ -0.91
AP001269.2-201ENST00000590055 IGHV3-30-5P0DP03 117 aa9.36□□□□□ -0.91
AP001269.2-201ENST00000590055 TWIST1Q15672 202 aa9.36□□□□□ -0.91
AP001269.2-201ENST00000590055 TMEM241Q24JQ0 296 aa9.36□□□□□ -0.91
AP001269.2-201ENST00000590055 NEXN-AS1Q8NBZ9 246 aa9.36□□□□□ -0.91
AP001269.2-201ENST00000590055 A8MWL6 223 aa9.35□□□□□ -0.91
AP001269.2-201ENST00000590055 UBE2D3P61077 147 aa9.35□□□□□ -0.91
AP001269.2-201ENST00000590055 UBE2D2P62837 147 aa9.35□□□□□ -0.91
AP001269.2-201ENST00000590055 Q8N3U1 123 aa9.35□□□□□ -0.91
AP001269.2-201ENST00000590055 PGLYRP4Q96LB8 373 aa9.35□□□□□ -0.91
AP001269.2-201ENST00000590055 TRGC1P0CF51 173 aa9.34□□□□□ -0.91
AP001269.2-201ENST00000590055 RPL23P62829 140 aaKnown RBP9.34□□□□□ -0.91
AP001269.2-201ENST00000590055 FAM74A3Q4VXF1 159 aa9.34□□□□□ -0.91
AP001269.2-201ENST00000590055 LINC01556Q5JQF7 62 aa9.34□□□□□ -0.91
AP001269.2-201ENST00000590055 WDR73Q6P4I2 378 aa9.34□□□□□ -0.91
AP001269.2-201ENST00000590055 OR10G8Q8NGN5 311 aa9.34□□□□□ -0.91
AP001269.2-201ENST00000590055 A0A087WWC5 75 aa9.33□□□□□ -0.92
AP001269.2-201ENST00000590055 RAB14P61106 215 aa9.33□□□□□ -0.92
AP001269.2-201ENST00000590055 ADIRFQ15847 76 aa9.33□□□□□ -0.92
AP001269.2-201ENST00000590055 SUMO4Q6EEV6 95 aa9.33□□□□□ -0.92
AP001269.2-201ENST00000590055 Q6ZRN7 208 aaPredicted RBP9.33□□□□□ -0.92
AP001269.2-201ENST00000590055 ISOC2Q96AB3 205 aa9.33□□□□□ -0.92
AP001269.2-201ENST00000590055 CNFNQ9BYD5 112 aa9.33□□□□□ -0.92
AP001269.2-201ENST00000590055 DPH3P1Q9H4G8 78 aa9.33□□□□□ -0.92
AP001269.2-201ENST00000590055 SMDT1Q9H4I9 107 aa9.33□□□□□ -0.92
AP001269.2-201ENST00000590055 OSTCQ9NRP0 149 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms