RNA–Protein interactions for RNA: ENST00000589867.2

MBD1-221, Transcript of methyl-CpG binding domain protein 1, human

TSL 3

Gene MBD1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MBD1-221	ENST00000589867	SYT8	Q8NBV8	401 aa		11.76	□□□□□ -0.53
MBD1-221	ENST00000589867	PRADC1	Q9BSG0	188 aa		11.76	□□□□□ -0.53
MBD1-221	ENST00000589867	MUC21	A0A0G2JKD1	596 aa		11.75	□□□□□ -0.53
MBD1-221	ENST00000589867	MUC21	A0A140T8X8	626 aa		11.75	□□□□□ -0.53
MBD1-221	ENST00000589867	OR5AL1	P0C617	328 aa		11.75	□□□□□ -0.53
MBD1-221	ENST00000589867	GZMB	P10144	247 aa		11.75	□□□□□ -0.53
MBD1-221	ENST00000589867	TAGLN2	P37802	199 aa	Known RBP	11.75	□□□□□ -0.53
MBD1-221	ENST00000589867	GNG4	P50150	75 aa		11.75	□□□□□ -0.53
MBD1-221	ENST00000589867	SOHLH1	Q5JUK2	328 aa		11.75	□□□□□ -0.53
MBD1-221	ENST00000589867	ZFP82	Q8N141	532 aa		11.75	□□□□□ -0.53
MBD1-221	ENST00000589867	SMIM12	Q96EX1	92 aa		11.75	□□□□□ -0.53
MBD1-221	ENST00000589867	TNFRSF18	Q9Y5U5	241 aa		11.75	□□□□□ -0.53
MBD1-221	ENST00000589867	IGLC6	P0CF74	106 aa		11.74	□□□□□ -0.53
MBD1-221	ENST00000589867	DNAH10OS	P0CZ25	163 aa		11.74	□□□□□ -0.53
MBD1-221	ENST00000589867	LINC00315	P59091	139 aa		11.74	□□□□□ -0.53
MBD1-221	ENST00000589867	RBFOX3	A6NFN3	312 aa		11.73	□□□□□ -0.53
MBD1-221	ENST00000589867		K7EN84	100 aa		11.73	□□□□□ -0.53
MBD1-221	ENST00000589867	SH2D6	Q7Z4S9	175 aa		11.73	□□□□□ -0.53
MBD1-221	ENST00000589867	GAGE12J	A6NER3	117 aa		11.72	□□□□□ -0.53
MBD1-221	ENST00000589867	RHOD	O00212	210 aa		11.72	□□□□□ -0.53
MBD1-221	ENST00000589867	GAGE1	Q13065	139 aa		11.72	□□□□□ -0.53
MBD1-221	ENST00000589867	GAGE4	Q13068	117 aa		11.72	□□□□□ -0.53
MBD1-221	ENST00000589867	GAGE5	Q13069	117 aa		11.72	□□□□□ -0.53
MBD1-221	ENST00000589867	GAGE13	Q4V321	117 aa		11.72	□□□□□ -0.53
MBD1-221	ENST00000589867	FAM74A4	Q5TZK3	123 aa		11.72	□□□□□ -0.53
MBD1-221	ENST00000589867	KIF25-AS1	Q9Y6Z4	181 aa		11.72	□□□□□ -0.53
MBD1-221	ENST00000589867	BTF3	P20290	206 aa	Known RBP	11.71	□□□□□ -0.53
MBD1-221	ENST00000589867	OR2D3	Q8NGH3	330 aa		11.71	□□□□□ -0.53
MBD1-221	ENST00000589867	ATP6V0E2	Q8NHE4	81 aa		11.71	□□□□□ -0.53
MBD1-221	ENST00000589867	OCC1	Q8TAD7	63 aa		11.71	□□□□□ -0.53
MBD1-221	ENST00000589867	GTSF1L	Q9H1H1	148 aa		11.71	□□□□□ -0.53
MBD1-221	ENST00000589867	TMEM250	H0YL14	139 aa		11.7	□□□□□ -0.54
MBD1-221	ENST00000589867	NUDT10	Q8NFP7	164 aa		11.7	□□□□□ -0.54
MBD1-221	ENST00000589867	NUDT11	Q96G61	164 aa		11.7	□□□□□ -0.54
MBD1-221	ENST00000589867	LY96	Q9Y6Y9	160 aa		11.7	□□□□□ -0.54
MBD1-221	ENST00000589867	TOR2A	Q5JU69	321 aa		11.69	□□□□□ -0.54
MBD1-221	ENST00000589867	LELP1	Q5T871	98 aa		11.69	□□□□□ -0.54
MBD1-221	ENST00000589867		Q8N3U1	123 aa		11.69	□□□□□ -0.54
MBD1-221	ENST00000589867	MSRB1	Q9NZV6	116 aa		11.69	□□□□□ -0.54
MBD1-221	ENST00000589867	SST	P61278	116 aa		11.68	□□□□□ -0.54
MBD1-221	ENST00000589867	FAM210A	Q96ND0	272 aa		11.68	□□□□□ -0.54
MBD1-221	ENST00000589867	RNASE7	Q9H1E1	156 aa	Known RBP	11.68	□□□□□ -0.54
MBD1-221	ENST00000589867	IGHV3-38	A0A0C4DH36	116 aa		11.67	□□□□□ -0.54
MBD1-221	ENST00000589867		P01737	135 aa		11.67	□□□□□ -0.54
MBD1-221	ENST00000589867	RPS20	P60866	119 aa	Known RBP	11.67	□□□□□ -0.54
MBD1-221	ENST00000589867	LINC01556	Q5JQF7	62 aa		11.67	□□□□□ -0.54
MBD1-221	ENST00000589867	SPANXN1	Q5VSR9	72 aa		11.67	□□□□□ -0.54
MBD1-221	ENST00000589867	FER1L6-AS1	Q8NA97	138 aa		11.67	□□□□□ -0.54
MBD1-221	ENST00000589867	DAZAP1	Q96EP5	407 aa	Known RBP	11.67	□□□□□ -0.54
MBD1-221	ENST00000589867	APOB	P04114	4563 aa	Known RBP	11.67	□□□□□ -0.54
MBD1-221	ENST00000589867	HSPG2	P98160	4391 aa		11.67	□□□□□ -0.54
MBD1-221	ENST00000589867	NDUFS6	O75380	124 aa	Known RBP	11.66	□□□□□ -0.54
MBD1-221	ENST00000589867	SRP19	P09132	144 aa	Known RBP	11.66	□□□□□ -0.54
MBD1-221	ENST00000589867	RAB4B	P61018	213 aa		11.66	□□□□□ -0.54
MBD1-221	ENST00000589867	OR10G8	Q8NGN5	311 aa		11.66	□□□□□ -0.54
MBD1-221	ENST00000589867	RYR1	P21817	5038 aa		11.66	□□□□□ -0.54
MBD1-221	ENST00000589867	TRBV10-1	A0A0K0K1A3	114 aa		11.65	□□□□□ -0.54
MBD1-221	ENST00000589867	EVI2A	P22794	236 aa		11.65	□□□□□ -0.54
MBD1-221	ENST00000589867	UBE2D3	P61077	147 aa		11.65	□□□□□ -0.54
MBD1-221	ENST00000589867	UBE2D2	P62837	147 aa		11.65	□□□□□ -0.54
MBD1-221	ENST00000589867	OR10J3	Q5JRS4	329 aa		11.65	□□□□□ -0.54
MBD1-221	ENST00000589867	TEX261	Q6UWH6	196 aa		11.65	□□□□□ -0.54
MBD1-221	ENST00000589867	NEXN-AS1	Q8NBZ9	246 aa		11.65	□□□□□ -0.54
MBD1-221	ENST00000589867	BIN3	Q9NQY0	253 aa		11.65	□□□□□ -0.54
MBD1-221	ENST00000589867		C9JQL5	133 aa		11.64	□□□□□ -0.55
MBD1-221	ENST00000589867		K7EP13	123 aa		11.64	□□□□□ -0.55
MBD1-221	ENST00000589867	CTRL	P40313	264 aa		11.64	□□□□□ -0.55
MBD1-221	ENST00000589867	LYZL1	Q6UWQ5	148 aa		11.64	□□□□□ -0.55
MBD1-221	ENST00000589867	TPPP3	Q9BW30	176 aa		11.64	□□□□□ -0.55
MBD1-221	ENST00000589867	TRAV8-6	A0A0B4J262	113 aa		11.63	□□□□□ -0.55
MBD1-221	ENST00000589867	KRTAP10-2	P60368	255 aa		11.63	□□□□□ -0.55
MBD1-221	ENST00000589867	GTSF1	Q8WW33	167 aa		11.63	□□□□□ -0.55
MBD1-221	ENST00000589867	CNFN	Q9BYD5	112 aa		11.63	□□□□□ -0.55
MBD1-221	ENST00000589867	EIF5A2	Q9GZV4	153 aa	Known RBP	11.63	□□□□□ -0.55
MBD1-221	ENST00000589867	RPP21	Q9H633	154 aa	Known RBP	11.63	□□□□□ -0.55
MBD1-221	ENST00000589867	TRBV7-3	A0A075B6L6	115 aa		11.62	□□□□□ -0.55
MBD1-221	ENST00000589867	TRAV9-2	A0A087WT02	112 aa		11.62	□□□□□ -0.55
MBD1-221	ENST00000589867	IBA57-AS1	B1ANH7	110 aa		11.62	□□□□□ -0.55
MBD1-221	ENST00000589867	IGHV3-30	P01768	117 aa		11.62	□□□□□ -0.55
MBD1-221	ENST00000589867	IGHV3-33	P01772	117 aa		11.62	□□□□□ -0.55
MBD1-221	ENST00000589867	IGHV3-30-3	P0DP02	117 aa		11.62	□□□□□ -0.55
MBD1-221	ENST00000589867	IGHV3-30-5	P0DP03	117 aa		11.62	□□□□□ -0.55
MBD1-221	ENST00000589867	SRSF3	P84103	164 aa	Known RBP	11.62	□□□□□ -0.55
MBD1-221	ENST00000589867	ZNF56	Q15929	161 aa		11.62	□□□□□ -0.55
MBD1-221	ENST00000589867		F2Z2F3	143 aa		11.61	□□□□□ -0.55
MBD1-221	ENST00000589867	CEBPG	P53567	150 aa		11.61	□□□□□ -0.55
MBD1-221	ENST00000589867	CACNG7	P62955	275 aa		11.61	□□□□□ -0.55
MBD1-221	ENST00000589867	FAM231D	Q6ZW35	169 aa		11.61	□□□□□ -0.55
MBD1-221	ENST00000589867	AP1S3	Q96PC3	154 aa		11.61	□□□□□ -0.55
MBD1-221	ENST00000589867	XKRY2	A2RUG3	117 aa		11.6	□□□□□ -0.55
MBD1-221	ENST00000589867		M0QY20	66 aa		11.6	□□□□□ -0.55
MBD1-221	ENST00000589867	NTF3	P20783	257 aa		11.6	□□□□□ -0.55
MBD1-221	ENST00000589867	RPL36A	P83881	106 aa	Known RBP	11.6	□□□□□ -0.55
MBD1-221	ENST00000589867	WDR73	Q6P4I2	378 aa		11.6	□□□□□ -0.55
MBD1-221	ENST00000589867	SPATA12	Q7Z6I5	190 aa		11.6	□□□□□ -0.55
MBD1-221	ENST00000589867	LINC01551	Q86U37	167 aa		11.6	□□□□□ -0.55
MBD1-221	ENST00000589867	C10orf126	Q8N4M7	172 aa		11.6	□□□□□ -0.55
MBD1-221	ENST00000589867	RPL36AL	Q969Q0	106 aa	Known RBP	11.6	□□□□□ -0.55
MBD1-221	ENST00000589867	SMIM7	Q9BQ49	75 aa		11.6	□□□□□ -0.55
MBD1-221	ENST00000589867	NFE4	Q86UQ8	179 aa		11.59	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 43 ms