RNA–Protein interactions for RNA: ENST00000589538.5

DNMT1-221, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-221ENST00000589538 FER1L6-AS1Q8NA97 138 aa11.24□□□□□ -0.61
DNMT1-221ENST00000589538 OR10AG1Q8NH19 301 aa11.24□□□□□ -0.61
DNMT1-221ENST00000589538 ATP6V0E2Q8NHE4 81 aa11.24□□□□□ -0.61
DNMT1-221ENST00000589538 FAM210AQ96ND0 272 aa11.24□□□□□ -0.61
DNMT1-221ENST00000589538 LY96Q9Y6Y9 160 aa11.24□□□□□ -0.61
DNMT1-221ENST00000589538 DNAH10Q8IVF4 4471 aa11.24□□□□□ -0.61
DNMT1-221ENST00000589538 TRAV8-6A0A0B4J262 113 aa11.23□□□□□ -0.61
DNMT1-221ENST00000589538 TRBV10-1A0A0K0K1A3 114 aa11.23□□□□□ -0.61
DNMT1-221ENST00000589538 F2Z2F3 143 aa11.23□□□□□ -0.61
DNMT1-221ENST00000589538 TEX261Q6UWH6 196 aa11.23□□□□□ -0.61
DNMT1-221ENST00000589538 Q6ZSN1 163 aa11.23□□□□□ -0.61
DNMT1-221ENST00000589538 GTSF1LQ9H1H1 148 aa11.23□□□□□ -0.61
DNMT1-221ENST00000589538 FRAS1Q86XX4 4008 aa11.22□□□□□ -0.61
DNMT1-221ENST00000589538 EVI2AP22794 236 aa11.22□□□□□ -0.61
DNMT1-221ENST00000589538 RAB4BP61018 213 aa11.22□□□□□ -0.61
DNMT1-221ENST00000589538 CACNG7P62955 275 aa11.22□□□□□ -0.61
DNMT1-221ENST00000589538 OCC1Q8TAD7 63 aa11.22□□□□□ -0.61
DNMT1-221ENST00000589538 AP1S3Q96PC3 154 aa11.22□□□□□ -0.61
DNMT1-221ENST00000589538 KRTAP1-5Q9BYS1 174 aa11.22□□□□□ -0.61
DNMT1-221ENST00000589538 GAGE12JA6NER3 117 aa11.21□□□□□ -0.61
DNMT1-221ENST00000589538 IGLC6P0CF74 106 aa11.21□□□□□ -0.61
DNMT1-221ENST00000589538 DNAH10OSP0CZ25 163 aa11.21□□□□□ -0.61
DNMT1-221ENST00000589538 SMIM17P0DL12 118 aa11.21□□□□□ -0.61
DNMT1-221ENST00000589538 GAGE1Q13065 139 aa11.21□□□□□ -0.61
DNMT1-221ENST00000589538 GAGE4Q13068 117 aa11.21□□□□□ -0.61
DNMT1-221ENST00000589538 GAGE5Q13069 117 aa11.21□□□□□ -0.61
DNMT1-221ENST00000589538 GAGE13Q4V321 117 aa11.21□□□□□ -0.61
DNMT1-221ENST00000589538 LELP1Q5T871 98 aa11.21□□□□□ -0.61
DNMT1-221ENST00000589538 C10orf126Q8N4M7 172 aa11.21□□□□□ -0.61
DNMT1-221ENST00000589538 C14orf178Q8N769 122 aaPredicted RBP11.21□□□□□ -0.61
DNMT1-221ENST00000589538 NUDT10Q8NFP7 164 aa11.21□□□□□ -0.61
DNMT1-221ENST00000589538 NUDT11Q96G61 164 aa11.21□□□□□ -0.61
DNMT1-221ENST00000589538 TPPP3Q9BW30 176 aa11.21□□□□□ -0.61
DNMT1-221ENST00000589538 A0A087WWC5 75 aa11.2□□□□□ -0.62
DNMT1-221ENST00000589538 LINC00694P0DN24 101 aa11.2□□□□□ -0.62
DNMT1-221ENST00000589538 CEBPGP53567 150 aa11.2□□□□□ -0.62
DNMT1-221ENST00000589538 OR10J3Q5JRS4 329 aa11.2□□□□□ -0.62
DNMT1-221ENST00000589538 WFDC10BQ8IUB3 73 aa11.2□□□□□ -0.62
DNMT1-221ENST00000589538 RPP21Q9H633 154 aaKnown RBP11.2□□□□□ -0.62
DNMT1-221ENST00000589538 EPPK1P58107 5090 aaKnown RBP11.2□□□□□ -0.62
DNMT1-221ENST00000589538 IGHV3-38A0A0C4DH36 116 aa11.19□□□□□ -0.62
DNMT1-221ENST00000589538 A0A1B0GVY2 172 aa11.19□□□□□ -0.62
DNMT1-221ENST00000589538 K7EN84 100 aa11.19□□□□□ -0.62
DNMT1-221ENST00000589538 GZMBP10144 247 aa11.19□□□□□ -0.62
DNMT1-221ENST00000589538 RPL36AP83881 106 aaKnown RBP11.19□□□□□ -0.62
DNMT1-221ENST00000589538 ZNF56Q15929 161 aa11.19□□□□□ -0.62
DNMT1-221ENST00000589538 WDR73Q6P4I2 378 aa11.19□□□□□ -0.62
DNMT1-221ENST00000589538 NFE4Q86UQ8 179 aa11.19□□□□□ -0.62
DNMT1-221ENST00000589538 RPL36ALQ969Q0 106 aaKnown RBP11.19□□□□□ -0.62
DNMT1-221ENST00000589538 SMIM7Q9BQ49 75 aa11.19□□□□□ -0.62
DNMT1-221ENST00000589538 MUC21A0A0G2JKD1 596 aa11.18□□□□□ -0.62
DNMT1-221ENST00000589538 MUC21A0A140T8X8 626 aa11.18□□□□□ -0.62
DNMT1-221ENST00000589538 LINC01556Q5JQF7 62 aa11.18□□□□□ -0.62
DNMT1-221ENST00000589538 RNASE7Q9H1E1 156 aaKnown RBP11.18□□□□□ -0.62
DNMT1-221ENST00000589538 DNAH2Q9P225 4427 aa11.17□□□□□ -0.62
DNMT1-221ENST00000589538 TRBV7-3A0A075B6L6 115 aa11.17□□□□□ -0.62
DNMT1-221ENST00000589538 ZNF727A8MUV8 499 aa11.17□□□□□ -0.62
DNMT1-221ENST00000589538 SRP19P09132 144 aaKnown RBP11.17□□□□□ -0.62
DNMT1-221ENST00000589538 TRGC1P0CF51 173 aa11.17□□□□□ -0.62
DNMT1-221ENST00000589538 LINC00315P59091 139 aa11.17□□□□□ -0.62
DNMT1-221ENST00000589538 FAM231DQ6ZW35 169 aa11.17□□□□□ -0.62
DNMT1-221ENST00000589538 SMDT1Q9H4I9 107 aa11.17□□□□□ -0.62
DNMT1-221ENST00000589538 F5H697 171 aa11.16□□□□□ -0.62
DNMT1-221ENST00000589538 GATCO43716 136 aaKnown RBP11.16□□□□□ -0.62
DNMT1-221ENST00000589538 CTRLP40313 264 aa11.16□□□□□ -0.62
DNMT1-221ENST00000589538 SSTP61278 116 aa11.16□□□□□ -0.62
DNMT1-221ENST00000589538 PEA15Q15121 130 aa11.16□□□□□ -0.62
DNMT1-221ENST00000589538 FAM74A3Q4VXF1 159 aa11.16□□□□□ -0.62
DNMT1-221ENST00000589538 LYZL1Q6UWQ5 148 aa11.16□□□□□ -0.62
DNMT1-221ENST00000589538 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.16□□□□□ -0.62
DNMT1-221ENST00000589538 OR10G8Q8NGN5 311 aa11.16□□□□□ -0.62
DNMT1-221ENST00000589538 A8MWL6 223 aa11.15□□□□□ -0.62
DNMT1-221ENST00000589538 ERVFC1-1P60608 527 aa11.15□□□□□ -0.62
DNMT1-221ENST00000589538 TNP2Q05952 138 aa11.15□□□□□ -0.62
DNMT1-221ENST00000589538 MSRB1Q9NZV6 116 aa11.15□□□□□ -0.62
DNMT1-221ENST00000589538 Q9UF83 564 aa11.15□□□□□ -0.62
DNMT1-221ENST00000589538 KIF25-AS1Q9Y6Z4 181 aa11.15□□□□□ -0.62
DNMT1-221ENST00000589538 H7C1H1 209 aa11.14□□□□□ -0.63
DNMT1-221ENST00000589538 UBE2D3P61077 147 aa11.14□□□□□ -0.63
DNMT1-221ENST00000589538 UBE2D2P62837 147 aa11.14□□□□□ -0.63
DNMT1-221ENST00000589538 CT83Q5H943 113 aa11.14□□□□□ -0.63
DNMT1-221ENST00000589538 LINC01551Q86U37 167 aa11.14□□□□□ -0.63
DNMT1-221ENST00000589538 CNFNQ9BYD5 112 aa11.14□□□□□ -0.63
DNMT1-221ENST00000589538 DNAH17Q9UFH2 4485 aa11.14□□□□□ -0.63
DNMT1-221ENST00000589538 HECTD4Q9Y4D8 3996 aa11.13□□□□□ -0.63
DNMT1-221ENST00000589538 NTF3P20783 257 aa11.13□□□□□ -0.63
DNMT1-221ENST00000589538 DPH3P1Q9H4G8 78 aa11.13□□□□□ -0.63
DNMT1-221ENST00000589538 MGPP08493 103 aa11.12□□□□□ -0.63
DNMT1-221ENST00000589538 TMEM241Q24JQ0 296 aa11.12□□□□□ -0.63
DNMT1-221ENST00000589538 NEXN-AS1Q8NBZ9 246 aa11.12□□□□□ -0.63
DNMT1-221ENST00000589538 FAT2Q9NYQ8 4349 aa11.11□□□□□ -0.63
DNMT1-221ENST00000589538 IBA57-AS1B1ANH7 110 aa11.11□□□□□ -0.63
DNMT1-221ENST00000589538 TWIST1Q15672 202 aa11.11□□□□□ -0.63
DNMT1-221ENST00000589538 TMEM97Q5BJF2 176 aa11.11□□□□□ -0.63
DNMT1-221ENST00000589538 Q6ZRN7 208 aaPredicted RBP11.11□□□□□ -0.63
DNMT1-221ENST00000589538 SMIM15Q7Z3B0 74 aa11.11□□□□□ -0.63
DNMT1-221ENST00000589538 C15orf54Q8N8G6 183 aa11.11□□□□□ -0.63
DNMT1-221ENST00000589538 DNAJC30Q96LL9 226 aa11.11□□□□□ -0.63
DNMT1-221ENST00000589538 OSTCQ9NRP0 149 aa11.11□□□□□ -0.63
DNMT1-221ENST00000589538 URGCP-MRPS24S4R325 110 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms