RNA–Protein interactions for RNA: ENST00000589201.1

LINC00654-202, long intergenic non-protein coding RNA 654, humanhuman

TSL 3 BASIC

Gene LINC00654, Length 579 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00654-202ENST00000589201 SSBP4Q9BWG4 385 aaPredicted RBP13.54□□□□□ -0.24
LINC00654-202ENST00000589201 MUC21A0A0G2JKD1 596 aa13.53□□□□□ -0.24
LINC00654-202ENST00000589201 MUC21A0A140T8X8 626 aa13.53□□□□□ -0.24
LINC00654-202ENST00000589201 C19orf71A6NCJ1 209 aa13.53□□□□□ -0.24
LINC00654-202ENST00000589201 RBFOX3A6NFN3 312 aa13.53□□□□□ -0.24
LINC00654-202ENST00000589201 SNAI2O43623 268 aa13.53□□□□□ -0.24
LINC00654-202ENST00000589201 TIRAPP58753 221 aa13.53□□□□□ -0.24
LINC00654-202ENST00000589201 GAGE12JA6NER3 117 aa13.52□□□□□ -0.25
LINC00654-202ENST00000589201 OR5AL1P0C617 328 aa13.52□□□□□ -0.25
LINC00654-202ENST00000589201 GAGE1Q13065 139 aa13.52□□□□□ -0.25
LINC00654-202ENST00000589201 GAGE4Q13068 117 aa13.52□□□□□ -0.25
LINC00654-202ENST00000589201 GAGE5Q13069 117 aa13.52□□□□□ -0.25
LINC00654-202ENST00000589201 GAGE13Q4V321 117 aa13.52□□□□□ -0.25
LINC00654-202ENST00000589201 ATP6V0E2Q8NHE4 81 aa13.52□□□□□ -0.25
LINC00654-202ENST00000589201 LY96Q9Y6Y9 160 aa13.52□□□□□ -0.25
LINC00654-202ENST00000589201 GZMBP10144 247 aa13.51□□□□□ -0.25
LINC00654-202ENST00000589201 LINC00315P59091 139 aa13.51□□□□□ -0.25
LINC00654-202ENST00000589201 SSTP61278 116 aa13.51□□□□□ -0.25
LINC00654-202ENST00000589201 OR2D3Q8NGH3 330 aa13.51□□□□□ -0.25
LINC00654-202ENST00000589201 DNAH10OSP0CZ25 163 aa13.5□□□□□ -0.25
LINC00654-202ENST00000589201 LINC00694P0DN24 101 aa13.5□□□□□ -0.25
LINC00654-202ENST00000589201 BTF3P20290 206 aaKnown RBP13.5□□□□□ -0.25
LINC00654-202ENST00000589201 SPANXN1Q5VSR9 72 aa13.5□□□□□ -0.25
LINC00654-202ENST00000589201 GTSF1LQ9H1H1 148 aa13.5□□□□□ -0.25
LINC00654-202ENST00000589201 TNFRSF18Q9Y5U5 241 aa13.5□□□□□ -0.25
LINC00654-202ENST00000589201 TRAV9-2A0A087WT02 112 aa13.49□□□□□ -0.25
LINC00654-202ENST00000589201 P01737 135 aa13.49□□□□□ -0.25
LINC00654-202ENST00000589201 RPS20P60866 119 aaKnown RBP13.49□□□□□ -0.25
LINC00654-202ENST00000589201 OCC1Q8TAD7 63 aa13.49□□□□□ -0.25
LINC00654-202ENST00000589201 BIN3Q9NQY0 253 aa13.49□□□□□ -0.25
LINC00654-202ENST00000589201 TMEM250H0YL14 139 aa13.48□□□□□ -0.25
LINC00654-202ENST00000589201 IGLC6P0CF74 106 aa13.48□□□□□ -0.25
LINC00654-202ENST00000589201 EVI2AP22794 236 aa13.48□□□□□ -0.25
LINC00654-202ENST00000589201 OR10J3Q5JRS4 329 aa13.48□□□□□ -0.25
LINC00654-202ENST00000589201 NUDT10Q8NFP7 164 aa13.48□□□□□ -0.25
LINC00654-202ENST00000589201 NUDT11Q96G61 164 aa13.48□□□□□ -0.25
LINC00654-202ENST00000589201 TRAV8-6A0A0B4J262 113 aa13.47□□□□□ -0.25
LINC00654-202ENST00000589201 IGHV3-38A0A0C4DH36 116 aa13.47□□□□□ -0.25
LINC00654-202ENST00000589201 K7EN84 100 aa13.47□□□□□ -0.25
LINC00654-202ENST00000589201 TOR2AQ5JU69 321 aa13.47□□□□□ -0.25
LINC00654-202ENST00000589201 LELP1Q5T871 98 aa13.47□□□□□ -0.25
LINC00654-202ENST00000589201 FER1L6-AS1Q8NA97 138 aa13.47□□□□□ -0.25
LINC00654-202ENST00000589201 TPPP3Q9BW30 176 aa13.47□□□□□ -0.25
LINC00654-202ENST00000589201 EIF5A2Q9GZV4 153 aaKnown RBP13.47□□□□□ -0.25
LINC00654-202ENST00000589201 Q6ZRN7 208 aaPredicted RBP13.46□□□□□ -0.25
LINC00654-202ENST00000589201 K7EP13 123 aa13.45□□□□□ -0.26
LINC00654-202ENST00000589201 CEBPGP53567 150 aa13.45□□□□□ -0.26
LINC00654-202ENST00000589201 RAB4BP61018 213 aa13.45□□□□□ -0.26
LINC00654-202ENST00000589201 FAM210AQ96ND0 272 aa13.45□□□□□ -0.26
LINC00654-202ENST00000589201 RNASE7Q9H1E1 156 aaKnown RBP13.45□□□□□ -0.26
LINC00654-202ENST00000589201 KIAA1109Q2LD37 5005 aa13.44□□□□□ -0.26
LINC00654-202ENST00000589201 XKRY2A2RUG3 117 aa13.44□□□□□ -0.26
LINC00654-202ENST00000589201 ZNF56Q15929 161 aa13.44□□□□□ -0.26
LINC00654-202ENST00000589201 MSRB1Q9NZV6 116 aa13.44□□□□□ -0.26
LINC00654-202ENST00000589201 KIF25-AS1Q9Y6Z4 181 aa13.44□□□□□ -0.26
LINC00654-202ENST00000589201 TRBV10-1A0A0K0K1A3 114 aa13.43□□□□□ -0.26
LINC00654-202ENST00000589201 LINC01556Q5JQF7 62 aa13.43□□□□□ -0.26
LINC00654-202ENST00000589201 TEX261Q6UWH6 196 aa13.43□□□□□ -0.26
LINC00654-202ENST00000589201 LYZL1Q6UWQ5 148 aa13.42□□□□□ -0.26
LINC00654-202ENST00000589201 C10orf126Q8N4M7 172 aa13.42□□□□□ -0.26
LINC00654-202ENST00000589201 DNAH5Q8TE73 4624 aa13.42□□□□□ -0.26
LINC00654-202ENST00000589201 HERC2O95714 4834 aa13.42□□□□□ -0.26
LINC00654-202ENST00000589201 TRBV7-3A0A075B6L6 115 aa13.41□□□□□ -0.26
LINC00654-202ENST00000589201 F2Z2F3 143 aa13.41□□□□□ -0.26
LINC00654-202ENST00000589201 F5H697 171 aa13.41□□□□□ -0.26
LINC00654-202ENST00000589201 IGHV3-30P01768 117 aa13.41□□□□□ -0.26
LINC00654-202ENST00000589201 IGHV3-33P01772 117 aa13.41□□□□□ -0.26
LINC00654-202ENST00000589201 SMIM17P0DL12 118 aa13.41□□□□□ -0.26
LINC00654-202ENST00000589201 IGHV3-30-3P0DP02 117 aa13.41□□□□□ -0.26
LINC00654-202ENST00000589201 IGHV3-30-5P0DP03 117 aa13.41□□□□□ -0.26
LINC00654-202ENST00000589201 CACNG7P62955 275 aa13.41□□□□□ -0.26
LINC00654-202ENST00000589201 RPL36AP83881 106 aaKnown RBP13.41□□□□□ -0.26
LINC00654-202ENST00000589201 NFE4Q86UQ8 179 aa13.41□□□□□ -0.26
LINC00654-202ENST00000589201 RPL36ALQ969Q0 106 aaKnown RBP13.41□□□□□ -0.26
LINC00654-202ENST00000589201 AP1S3Q96PC3 154 aa13.41□□□□□ -0.26
LINC00654-202ENST00000589201 RPP21Q9H633 154 aaKnown RBP13.41□□□□□ -0.26
LINC00654-202ENST00000589201 LRP1BQ9NZR2 4599 aa13.4□□□□□ -0.26
LINC00654-202ENST00000589201 A0A087WWC5 75 aa13.4□□□□□ -0.26
LINC00654-202ENST00000589201 NDUFS6O75380 124 aaKnown RBP13.4□□□□□ -0.26
LINC00654-202ENST00000589201 SRP19P09132 144 aaKnown RBP13.4□□□□□ -0.26
LINC00654-202ENST00000589201 UBE2D3P61077 147 aa13.4□□□□□ -0.26
LINC00654-202ENST00000589201 UBE2D2P62837 147 aa13.4□□□□□ -0.26
LINC00654-202ENST00000589201 OR10G8Q8NGN5 311 aa13.4□□□□□ -0.26
LINC00654-202ENST00000589201 NEXN-AS1Q8NBZ9 246 aa13.39□□□□□ -0.27
LINC00654-202ENST00000589201 SMIM7Q9BQ49 75 aa13.39□□□□□ -0.27
LINC00654-202ENST00000589201 IBA57-AS1B1ANH7 110 aa13.38□□□□□ -0.27
LINC00654-202ENST00000589201 NTF3P20783 257 aa13.38□□□□□ -0.27
LINC00654-202ENST00000589201 Q8N3U1 123 aa13.38□□□□□ -0.27
LINC00654-202ENST00000589201 CTRLP40313 264 aa13.37□□□□□ -0.27
LINC00654-202ENST00000589201 WDR73Q6P4I2 378 aa13.37□□□□□ -0.27
LINC00654-202ENST00000589201 SPATA12Q7Z6I5 190 aa13.37□□□□□ -0.27
LINC00654-202ENST00000589201 ZNF727A8MUV8 499 aa13.36□□□□□ -0.27
LINC00654-202ENST00000589201 GATCO43716 136 aaKnown RBP13.36□□□□□ -0.27
LINC00654-202ENST00000589201 MGPP08493 103 aa13.36□□□□□ -0.27
LINC00654-202ENST00000589201 FAM231DQ6ZW35 169 aa13.36□□□□□ -0.27
LINC00654-202ENST00000589201 GTSF1Q8WW33 167 aa13.36□□□□□ -0.27
LINC00654-202ENST00000589201 C16orf90A8MZG2 172 aa13.35□□□□□ -0.27
LINC00654-202ENST00000589201 ERVFC1-1P60608 527 aa13.35□□□□□ -0.27
LINC00654-202ENST00000589201 LINC01551Q86U37 167 aa13.35□□□□□ -0.27
LINC00654-202ENST00000589201 C9JQL5 133 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms