RNA–Protein interactions for RNA: ENST00000588972.1

ATG4D-210, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 632 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-210ENST00000588972 GFRA4Q9GZZ7 299 aa5.32□□□□□ -1.56
ATG4D-210ENST00000588972 TRAV1-1A0A0B4J248 108 aa5.31□□□□□ -1.56
ATG4D-210ENST00000588972 CRXO43186 299 aaPredicted RBP5.31□□□□□ -1.56
ATG4D-210ENST00000588972 HBE1P02100 147 aa5.31□□□□□ -1.56
ATG4D-210ENST00000588972 PRM2P04554 102 aa5.31□□□□□ -1.56
ATG4D-210ENST00000588972 STAG3L2P0CL84 134 aa5.31□□□□□ -1.56
ATG4D-210ENST00000588972 TCTAP57738 103 aa5.31□□□□□ -1.56
ATG4D-210ENST00000588972 CLLU1Q5K131 121 aa5.31□□□□□ -1.56
ATG4D-210ENST00000588972 C1orf158Q8N1D5 194 aa5.31□□□□□ -1.56
ATG4D-210ENST00000588972 OR10J6PQ8NGY7 276 aa5.31□□□□□ -1.56
ATG4D-210ENST00000588972 ACTR3CQ9C0K3 210 aaPredicted RBP5.31□□□□□ -1.56
ATG4D-210ENST00000588972 Q9H3A6 140 aa5.31□□□□□ -1.56
ATG4D-210ENST00000588972 HERC1Q15751 4861 aa5.31□□□□□ -1.56
ATG4D-210ENST00000588972 LRP1BQ9NZR2 4599 aa5.3□□□□□ -1.56
ATG4D-210ENST00000588972 CTXND1A0A1B0GTU2 59 aa5.3□□□□□ -1.56
ATG4D-210ENST00000588972 A0A1B0GVY2 172 aa5.3□□□□□ -1.56
ATG4D-210ENST00000588972 INSP01308 110 aa5.3□□□□□ -1.56
ATG4D-210ENST00000588972 GCHFRP30047 84 aa5.3□□□□□ -1.56
ATG4D-210ENST00000588972 FGF8P55075 233 aaPredicted RBP5.3□□□□□ -1.56
ATG4D-210ENST00000588972 NDUFA5Q16718 116 aa5.3□□□□□ -1.56
ATG4D-210ENST00000588972 Q1RN00 199 aa5.3□□□□□ -1.56
ATG4D-210ENST00000588972 ZNF705AQ6ZN79 300 aaPredicted RBP5.3□□□□□ -1.56
ATG4D-210ENST00000588972 IQCF2Q8IXL9 164 aa5.3□□□□□ -1.56
ATG4D-210ENST00000588972 Q8TAT8 98 aa5.3□□□□□ -1.56
ATG4D-210ENST00000588972 MBD3L1Q8WWY6 194 aa5.3□□□□□ -1.56
ATG4D-210ENST00000588972 IGF2BP2-AS1Q96M15 143 aa5.3□□□□□ -1.56
ATG4D-210ENST00000588972 C11orf68Q9H3H3 251 aaKnown RBP5.3□□□□□ -1.56
ATG4D-210ENST00000588972 CELA1Q9UNI1 258 aa5.3□□□□□ -1.56
ATG4D-210ENST00000588972 NMBP08949 121 aa5.29□□□□□ -1.56
ATG4D-210ENST00000588972 MIFP14174 115 aa5.29□□□□□ -1.56
ATG4D-210ENST00000588972 CDKN1BP46527 198 aa5.29□□□□□ -1.56
ATG4D-210ENST00000588972 EMP1P54849 157 aa5.29□□□□□ -1.56
ATG4D-210ENST00000588972 GNG5P63218 68 aa5.29□□□□□ -1.56
ATG4D-210ENST00000588972 FAM74A1Q5RGS3 127 aa5.29□□□□□ -1.56
ATG4D-210ENST00000588972 LYPD6BQ8NI32 183 aa5.29□□□□□ -1.56
ATG4D-210ENST00000588972 FAM213BQ8TBF2 198 aa5.29□□□□□ -1.56
ATG4D-210ENST00000588972 KIR2DL4Q99706 377 aa5.29□□□□□ -1.56
ATG4D-210ENST00000588972 TMEM208Q9BTX3 173 aa5.29□□□□□ -1.56
ATG4D-210ENST00000588972 AGPAT4-IT1Q9H0P7 198 aa5.29□□□□□ -1.56
ATG4D-210ENST00000588972 OTORQ9NRC9 128 aa5.29□□□□□ -1.56
ATG4D-210ENST00000588972 MED9Q9NWA0 146 aa5.29□□□□□ -1.56
ATG4D-210ENST00000588972 PRELID1Q9Y255 219 aa5.29□□□□□ -1.56
ATG4D-210ENST00000588972 GOLT1BQ9Y3E0 138 aa5.29□□□□□ -1.56
ATG4D-210ENST00000588972 TRAV12-3A0A0B4J271 114 aa5.28□□□□□ -1.56
ATG4D-210ENST00000588972 A0A1B0GV50 99 aa5.28□□□□□ -1.56
ATG4D-210ENST00000588972 MAP1LC3B2A6NCE7 125 aa5.28□□□□□ -1.56
ATG4D-210ENST00000588972 PGPA6NDG6 321 aa5.28□□□□□ -1.56
ATG4D-210ENST00000588972 ZNF705GA8MUZ8 300 aaPredicted RBP5.28□□□□□ -1.56
ATG4D-210ENST00000588972 CXorf1O96002 111 aa5.28□□□□□ -1.56
ATG4D-210ENST00000588972 UBE2G2P60604 165 aa5.28□□□□□ -1.56
ATG4D-210ENST00000588972 HIGD2BQ4VC39 106 aa5.28□□□□□ -1.56
ATG4D-210ENST00000588972 PRR9Q5T870 116 aa5.28□□□□□ -1.56
ATG4D-210ENST00000588972 Q6ZQT7 251 aa5.28□□□□□ -1.56
ATG4D-210ENST00000588972 LYPD1Q8N2G4 141 aa5.28□□□□□ -1.56
ATG4D-210ENST00000588972 C6orf223Q8N319 242 aa5.28□□□□□ -1.56
ATG4D-210ENST00000588972 MAP1LC3BQ9GZQ8 125 aa5.28□□□□□ -1.56
ATG4D-210ENST00000588972 ARL2-SNX15V9GYD0 113 aa5.28□□□□□ -1.56
ATG4D-210ENST00000588972 TRAV8-1A0A0A6YYK1 113 aa5.27□□□□□ -1.57
ATG4D-210ENST00000588972 GGTLC3B5MD39 225 aa5.27□□□□□ -1.57
ATG4D-210ENST00000588972 NDUFS6O75380 124 aaKnown RBP5.27□□□□□ -1.57
ATG4D-210ENST00000588972 IFNA1P01562 189 aa5.27□□□□□ -1.57
ATG4D-210ENST00000588972 SLC25A5P05141 298 aaKnown RBP5.27□□□□□ -1.57
ATG4D-210ENST00000588972 HTN1P15515 57 aa5.27□□□□□ -1.57
ATG4D-210ENST00000588972 AZU1P20160 251 aa5.27□□□□□ -1.57
ATG4D-210ENST00000588972 CSN1S1P47710 185 aa5.27□□□□□ -1.57
ATG4D-210ENST00000588972 BTN1A1Q13410 526 aa5.27□□□□□ -1.57
ATG4D-210ENST00000588972 RRN3P1Q2M238 152 aa5.27□□□□□ -1.57
ATG4D-210ENST00000588972 TMEM78Q5T7P6 136 aa5.27□□□□□ -1.57
ATG4D-210ENST00000588972 Q6ZN92 141 aa5.27□□□□□ -1.57
ATG4D-210ENST00000588972 GOLT1AQ6ZVE7 132 aa5.27□□□□□ -1.57
ATG4D-210ENST00000588972 SUN5Q8TC36 379 aa5.27□□□□□ -1.57
ATG4D-210ENST00000588972 SFT2D1Q8WV19 159 aa5.27□□□□□ -1.57
ATG4D-210ENST00000588972 FAM19A4Q96LR4 140 aa5.27□□□□□ -1.57
ATG4D-210ENST00000588972 ODF3Q96PU9 254 aa5.27□□□□□ -1.57
ATG4D-210ENST00000588972 LINC01587Q99440 93 aa5.27□□□□□ -1.57
ATG4D-210ENST00000588972 TXNDC17Q9BRA2 123 aa5.27□□□□□ -1.57
ATG4D-210ENST00000588972 SMDT1Q9H4I9 107 aa5.27□□□□□ -1.57
ATG4D-210ENST00000588972 TMEM167BQ9NRX6 74 aa5.27□□□□□ -1.57
ATG4D-210ENST00000588972 ZNF492Q9P255 531 aa5.27□□□□□ -1.57
ATG4D-210ENST00000588972 YTHDF2Q9Y5A9 579 aaKnown RBP5.27□□□□□ -1.57
ATG4D-210ENST00000588972 APOBP04114 4563 aaKnown RBP5.27□□□□□ -1.57
ATG4D-210ENST00000588972 C7orf71A4D174 169 aa5.26□□□□□ -1.57
ATG4D-210ENST00000588972 RAB19A4D1S5 217 aa5.26□□□□□ -1.57
ATG4D-210ENST00000588972 LINC00862A6NCI5 91 aa5.26□□□□□ -1.57
ATG4D-210ENST00000588972 KLLNB2CW77 178 aa5.26□□□□□ -1.57
ATG4D-210ENST00000588972 IGLL5B9A064 214 aa5.26□□□□□ -1.57
ATG4D-210ENST00000588972 C11orf94C9JXX5 98 aa5.26□□□□□ -1.57
ATG4D-210ENST00000588972 GPX1P07203 203 aa5.26□□□□□ -1.57
ATG4D-210ENST00000588972 MT3P25713 68 aa5.26□□□□□ -1.57
ATG4D-210ENST00000588972 TSPOP30536 169 aa5.26□□□□□ -1.57
ATG4D-210ENST00000588972 RNASE4P34096 147 aaKnown RBP5.26□□□□□ -1.57
ATG4D-210ENST00000588972 ZNF138P52744 262 aa5.26□□□□□ -1.57
ATG4D-210ENST00000588972 ZFAND2AQ8N6M9 145 aa5.26□□□□□ -1.57
ATG4D-210ENST00000588972 CMTM2Q8TAZ6 248 aa5.26□□□□□ -1.57
ATG4D-210ENST00000588972 RXFP4Q8TDU9 374 aa5.26□□□□□ -1.57
ATG4D-210ENST00000588972 LINC00477Q96M19 166 aa5.26□□□□□ -1.57
ATG4D-210ENST00000588972 HIST1H4GQ99525 98 aa5.26□□□□□ -1.57
ATG4D-210ENST00000588972 NKX6-2Q9C056 277 aaPredicted RBP5.26□□□□□ -1.57
ATG4D-210ENST00000588972 MANBALQ9NQG1 85 aa5.26□□□□□ -1.57
ATG4D-210ENST00000588972 A0A1W2PRE2 83 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms