RNA–Protein interactions for RNA: ENST00000587740.5

NCLN-203, Transcript of nicalin, humanhuman

TSL 1 (best)

Gene NCLN, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-203ENST00000587740 M0R381 172 aa10.85□□□□□ -0.67
NCLN-203ENST00000587740 PAX4O43316 350 aa10.85□□□□□ -0.67
NCLN-203ENST00000587740 CIDEAO60543 219 aa10.85□□□□□ -0.67
NCLN-203ENST00000587740 CFAP126Q5VTH2 177 aa10.85□□□□□ -0.67
NCLN-203ENST00000587740 ZFP82Q8N141 532 aa10.85□□□□□ -0.67
NCLN-203ENST00000587740 RNASE7Q9H1E1 156 aaKnown RBP10.85□□□□□ -0.67
NCLN-203ENST00000587740 HHLA3Q9XRX5 114 aa10.85□□□□□ -0.67
NCLN-203ENST00000587740 SNAI2O43623 268 aa10.84□□□□□ -0.67
NCLN-203ENST00000587740 GZMBP10144 247 aa10.84□□□□□ -0.67
NCLN-203ENST00000587740 CRYBA4P53673 196 aa10.84□□□□□ -0.67
NCLN-203ENST00000587740 TMEM241Q24JQ0 296 aa10.84□□□□□ -0.67
NCLN-203ENST00000587740 LINC01551Q86U37 167 aa10.84□□□□□ -0.67
NCLN-203ENST00000587740 SSBP4Q9BWG4 385 aaPredicted RBP10.84□□□□□ -0.67
NCLN-203ENST00000587740 GATCO43716 136 aaKnown RBP10.83□□□□□ -0.68
NCLN-203ENST00000587740 OR5AL1P0C617 328 aa10.83□□□□□ -0.68
NCLN-203ENST00000587740 KRTAP10-2P60368 255 aa10.83□□□□□ -0.68
NCLN-203ENST00000587740 ERVFC1-1P60608 527 aa10.83□□□□□ -0.68
NCLN-203ENST00000587740 SPANXN1Q5VSR9 72 aa10.83□□□□□ -0.68
NCLN-203ENST00000587740 FAM231DQ6ZW35 169 aa10.83□□□□□ -0.68
NCLN-203ENST00000587740 FER1L6-AS1Q8NA97 138 aa10.83□□□□□ -0.68
NCLN-203ENST00000587740 VSIG2Q96IQ7 327 aa10.83□□□□□ -0.68
NCLN-203ENST00000587740 TPPP3Q9BW30 176 aa10.83□□□□□ -0.68
NCLN-203ENST00000587740 RPP21Q9H633 154 aaKnown RBP10.83□□□□□ -0.68
NCLN-203ENST00000587740 NAT8Q9UHE5 227 aa10.83□□□□□ -0.68
NCLN-203ENST00000587740 IGHV3-73A0A0B4J1V6 119 aa10.82□□□□□ -0.68
NCLN-203ENST00000587740 OR10AG1Q8NH19 301 aa10.82□□□□□ -0.68
NCLN-203ENST00000587740 LINC00588Q9Y4M8 146 aa10.82□□□□□ -0.68
NCLN-203ENST00000587740 FAT1Q14517 4588 aa10.81□□□□□ -0.68
NCLN-203ENST00000587740 A0A1W2PPQ1 181 aa10.81□□□□□ -0.68
NCLN-203ENST00000587740 IGLC6P0CF74 106 aa10.81□□□□□ -0.68
NCLN-203ENST00000587740 GATA1P15976 413 aaPredicted RBP10.81□□□□□ -0.68
NCLN-203ENST00000587740 ZFP2Q6ZN57 461 aa10.81□□□□□ -0.68
NCLN-203ENST00000587740 SFRP2Q96HF1 295 aa10.81□□□□□ -0.68
NCLN-203ENST00000587740 JPT2Q9H910 190 aa10.81□□□□□ -0.68
NCLN-203ENST00000587740 ICOSQ9Y6W8 199 aa10.81□□□□□ -0.68
NCLN-203ENST00000587740 MUC21A0A0G2JKD1 596 aa10.8□□□□□ -0.68
NCLN-203ENST00000587740 MUC21A0A140T8X8 626 aa10.8□□□□□ -0.68
NCLN-203ENST00000587740 F2Z2F3 143 aa10.8□□□□□ -0.68
NCLN-203ENST00000587740 RHODO00212 210 aa10.8□□□□□ -0.68
NCLN-203ENST00000587740 SSTP61278 116 aa10.8□□□□□ -0.68
NCLN-203ENST00000587740 RPL23P62829 140 aaKnown RBP10.8□□□□□ -0.68
NCLN-203ENST00000587740 ADIRFQ15847 76 aa10.8□□□□□ -0.68
NCLN-203ENST00000587740 KRTAP1-5Q9BYS1 174 aa10.8□□□□□ -0.68
NCLN-203ENST00000587740 A0A096LPF7 62 aa10.79□□□□□ -0.68
NCLN-203ENST00000587740 NXPH4O95158 308 aa10.79□□□□□ -0.68
NCLN-203ENST00000587740 CACNG7P62955 275 aa10.79□□□□□ -0.68
NCLN-203ENST00000587740 FAM74A4Q5TZK3 123 aa10.79□□□□□ -0.68
NCLN-203ENST00000587740 LYZL1Q6UWQ5 148 aa10.79□□□□□ -0.68
NCLN-203ENST00000587740 C15orf54Q8N8G6 183 aa10.79□□□□□ -0.68
NCLN-203ENST00000587740 ISOC2Q96AB3 205 aa10.79□□□□□ -0.68
NCLN-203ENST00000587740 SAMD10Q9BYL1 202 aa10.79□□□□□ -0.68
NCLN-203ENST00000587740 OSTCQ9NRP0 149 aa10.79□□□□□ -0.68
NCLN-203ENST00000587740 A0A087WWL8 130 aa10.78□□□□□ -0.68
NCLN-203ENST00000587740 TRBV6-4A0A1B0GX49 114 aa10.78□□□□□ -0.68
NCLN-203ENST00000587740 A8MWL6 223 aa10.78□□□□□ -0.68
NCLN-203ENST00000587740 GYPEP15421 78 aa10.78□□□□□ -0.68
NCLN-203ENST00000587740 CCL18P55774 89 aa10.78□□□□□ -0.68
NCLN-203ENST00000587740 MRPL23Q16540 153 aaKnown RBP10.78□□□□□ -0.68
NCLN-203ENST00000587740 SLC25A29Q8N8R3 303 aa10.78□□□□□ -0.68
NCLN-203ENST00000587740 PRADC1Q9BSG0 188 aa10.78□□□□□ -0.68
NCLN-203ENST00000587740 EPM2AB3EWF7 344 aa10.77□□□□□ -0.69
NCLN-203ENST00000587740 CRYGDP07320 174 aa10.77□□□□□ -0.69
NCLN-203ENST00000587740 RHOHQ15669 191 aa10.77□□□□□ -0.69
NCLN-203ENST00000587740 CT83Q5H943 113 aa10.77□□□□□ -0.69
NCLN-203ENST00000587740 UFSP1Q6NVU6 142 aa10.77□□□□□ -0.69
NCLN-203ENST00000587740 FLG2Q5D862 2391 aaPredicted RBP10.77□□□□□ -0.69
NCLN-203ENST00000587740 MYCBP2O75592 4640 aa10.77□□□□□ -0.69
NCLN-203ENST00000587740 K7EQD1 137 aa10.76□□□□□ -0.69
NCLN-203ENST00000587740 SMIM17P0DL12 118 aa10.76□□□□□ -0.69
NCLN-203ENST00000587740 SRIP30626 198 aa10.76□□□□□ -0.69
NCLN-203ENST00000587740 WDR73Q6P4I2 378 aa10.76□□□□□ -0.69
NCLN-203ENST00000587740 UQCC3Q6UW78 93 aa10.76□□□□□ -0.69
NCLN-203ENST00000587740 AP1S3Q96PC3 154 aa10.76□□□□□ -0.69
NCLN-203ENST00000587740 Q9H8V8 135 aa10.76□□□□□ -0.69
NCLN-203ENST00000587740 VPS13BQ7Z7G8 4022 aa10.75□□□□□ -0.69
NCLN-203ENST00000587740 CTRLP40313 264 aa10.75□□□□□ -0.69
NCLN-203ENST00000587740 OR10G8Q8NGN5 311 aa10.75□□□□□ -0.69
NCLN-203ENST00000587740 LOC100131303A0A0U1RQF7 123 aa10.74□□□□□ -0.69
NCLN-203ENST00000587740 TRGC1P0CF51 173 aa10.74□□□□□ -0.69
NCLN-203ENST00000587740 INAFM2P0DMQ5 153 aa10.74□□□□□ -0.69
NCLN-203ENST00000587740 NTF3P20783 257 aa10.74□□□□□ -0.69
NCLN-203ENST00000587740 ESRGQ1W209 222 aa10.74□□□□□ -0.69
NCLN-203ENST00000587740 Q6ZSN1 163 aa10.74□□□□□ -0.69
NCLN-203ENST00000587740 NEGR1Q7Z3B1 354 aa10.74□□□□□ -0.69
NCLN-203ENST00000587740 SH2D6Q7Z4S9 175 aa10.74□□□□□ -0.69
NCLN-203ENST00000587740 COMMD7Q86VX2 200 aa10.74□□□□□ -0.69
NCLN-203ENST00000587740 C14orf178Q8N769 122 aaPredicted RBP10.74□□□□□ -0.69
NCLN-203ENST00000587740 TSKUQ8WUA8 353 aa10.74□□□□□ -0.69
NCLN-203ENST00000587740 GTSF1Q8WW33 167 aa10.74□□□□□ -0.69
NCLN-203ENST00000587740 MSRB1Q9NZV6 116 aa10.74□□□□□ -0.69
NCLN-203ENST00000587740 V9GYV3 84 aa10.74□□□□□ -0.69
NCLN-203ENST00000587740 BTF3P20290 206 aaKnown RBP10.73□□□□□ -0.69
NCLN-203ENST00000587740 FOXA3P55318 350 aaPredicted RBP10.73□□□□□ -0.69
NCLN-203ENST00000587740 RAB4BP61018 213 aa10.73□□□□□ -0.69
NCLN-203ENST00000587740 TWIST1Q15672 202 aa10.73□□□□□ -0.69
NCLN-203ENST00000587740 ZNF56Q15929 161 aa10.73□□□□□ -0.69
NCLN-203ENST00000587740 BORCS7Q96B45 105 aa10.73□□□□□ -0.69
NCLN-203ENST00000587740 PGLYRP4Q96LB8 373 aa10.73□□□□□ -0.69
NCLN-203ENST00000587740 GFRA4Q9GZZ7 299 aa10.73□□□□□ -0.69
NCLN-203ENST00000587740 FAM231BA6NCW3 169 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms