RNA–Protein interactions for RNA: ENST00000587525.5

CACNA1A-209, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 1 (best)

Gene CACNA1A, Length 3,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-209ENST00000587525 LINC01587Q99440 93 aa10.55□□□□□ -0.72
CACNA1A-209ENST00000587525 TRBV7-1A0A0A6YYK4 115 aa10.55□□□□□ -0.72
CACNA1A-209ENST00000587525 IGHV1-69DA0A0B4J2H0 117 aa10.55□□□□□ -0.72
CACNA1A-209ENST00000587525 IGHV1-69P01742 117 aa10.55□□□□□ -0.72
CACNA1A-209ENST00000587525 C8orf31Q8N9H6 132 aa10.55□□□□□ -0.72
CACNA1A-209ENST00000587525 DPH3P1Q9H4G8 78 aa10.55□□□□□ -0.72
CACNA1A-209ENST00000587525 FSTL3O95633 263 aa10.54□□□□□ -0.72
CACNA1A-209ENST00000587525 ODF1Q14990 250 aa10.54□□□□□ -0.72
CACNA1A-209ENST00000587525 H7C1H1 209 aa10.54□□□□□ -0.72
CACNA1A-209ENST00000587525 ZFP2Q6ZN57 461 aa10.54□□□□□ -0.72
CACNA1A-209ENST00000587525 FOXI2Q6ZQN5 318 aa10.54□□□□□ -0.72
CACNA1A-209ENST00000587525 CRXO43186 299 aaPredicted RBP10.53□□□□□ -0.72
CACNA1A-209ENST00000587525 C9orf139Q6ZV77 190 aa10.53□□□□□ -0.72
CACNA1A-209ENST00000587525 INS-IGF2F8WCM5 200 aa10.53□□□□□ -0.72
CACNA1A-209ENST00000587525 DUSP14O95147 198 aaKnown RBP10.53□□□□□ -0.72
CACNA1A-209ENST00000587525 RPL13AP40429 203 aaKnown RBP10.53□□□□□ -0.72
CACNA1A-209ENST00000587525 CRYBA4P53673 196 aa10.53□□□□□ -0.72
CACNA1A-209ENST00000587525 NPBQ8NG41 125 aa10.53□□□□□ -0.72
CACNA1A-209ENST00000587525 DEFB131AP59861 70 aa10.53□□□□□ -0.72
CACNA1A-209ENST00000587525 IGF2-ASQ6U949 168 aa10.53□□□□□ -0.72
CACNA1A-209ENST00000587525 Q8N8P6 123 aa10.53□□□□□ -0.72
CACNA1A-209ENST00000587525 AJUBAQ96IF1 538 aa10.52□□□□□ -0.72
CACNA1A-209ENST00000587525 SMIM2Q9BVW6 85 aa10.52□□□□□ -0.72
CACNA1A-209ENST00000587525 VCX2Q9H322 139 aa10.52□□□□□ -0.72
CACNA1A-209ENST00000587525 TNFRSF18Q9Y5U5 241 aa10.52□□□□□ -0.72
CACNA1A-209ENST00000587525 USP24Q9UPU5 2620 aa10.52□□□□□ -0.72
CACNA1A-209ENST00000587525 TOMM7Q9P0U1 55 aa10.52□□□□□ -0.73
CACNA1A-209ENST00000587525 CRYBG3Q68DQ2 2970 aa10.52□□□□□ -0.73
CACNA1A-209ENST00000587525 SDHAF1A6NFY7 115 aa10.52□□□□□ -0.73
CACNA1A-209ENST00000587525 PRSS29PA6NIE9 313 aa10.52□□□□□ -0.73
CACNA1A-209ENST00000587525 ORMDL2Q53FV1 153 aa10.52□□□□□ -0.73
CACNA1A-209ENST00000587525 DAZ1Q9NQZ3 744 aaKnown RBP10.52□□□□□ -0.73
CACNA1A-209ENST00000587525 F8W1H4 67 aa10.51□□□□□ -0.73
CACNA1A-209ENST00000587525 CFHR3Q02985 330 aa10.51□□□□□ -0.73
CACNA1A-209ENST00000587525 RRN3P1Q2M238 152 aa10.51□□□□□ -0.73
CACNA1A-209ENST00000587525 CFAP46Q8IYW2 2715 aa10.51□□□□□ -0.73
CACNA1A-209ENST00000587525 LY6LH3BQJ8 138 aa10.51□□□□□ -0.73
CACNA1A-209ENST00000587525 C20orf173Q96LM9 149 aa10.51□□□□□ -0.73
CACNA1A-209ENST00000587525 MYMXA0A1B0GTQ4 84 aa10.51□□□□□ -0.73
CACNA1A-209ENST00000587525 GAGE2BQ13066 116 aa10.51□□□□□ -0.73
CACNA1A-209ENST00000587525 GAGE2EQ4V326 116 aa10.51□□□□□ -0.73
CACNA1A-209ENST00000587525 XCL2Q9UBD3 114 aa10.51□□□□□ -0.73
CACNA1A-209ENST00000587525 GAGE2DQ9UEU5 116 aa10.51□□□□□ -0.73
CACNA1A-209ENST00000587525 OOSP1A8MZH6 123 aa10.5□□□□□ -0.73
CACNA1A-209ENST00000587525 OVOL1O14753 267 aa10.5□□□□□ -0.73
CACNA1A-209ENST00000587525 MT-ATP8P03928 68 aa10.5□□□□□ -0.73
CACNA1A-209ENST00000587525 COX6B1P14854 86 aa10.5□□□□□ -0.73
CACNA1A-209ENST00000587525 PRR9Q5T870 116 aa10.5□□□□□ -0.73
CACNA1A-209ENST00000587525 ZANQ9Y493 2812 aa10.5□□□□□ -0.73
CACNA1A-209ENST00000587525 MSMBP08118 114 aa10.5□□□□□ -0.73
CACNA1A-209ENST00000587525 CD28P10747 220 aa10.5□□□□□ -0.73
CACNA1A-209ENST00000587525 ZFAND6Q6FIF0 208 aa10.5□□□□□ -0.73
CACNA1A-209ENST00000587525 A0A096LNJ9 63 aa10.49□□□□□ -0.73
CACNA1A-209ENST00000587525 TNFRSF13BO14836 293 aaPredicted RBP10.49□□□□□ -0.73
CACNA1A-209ENST00000587525 DEFB112Q30KQ8 113 aa10.49□□□□□ -0.73
CACNA1A-209ENST00000587525 MRAP2Q96G30 205 aa10.49□□□□□ -0.73
CACNA1A-209ENST00000587525 PLNP26678 52 aa10.49□□□□□ -0.73
CACNA1A-209ENST00000587525 LMO4P61968 165 aa10.49□□□□□ -0.73
CACNA1A-209ENST00000587525 C5orf56Q8N8D9 126 aa10.49□□□□□ -0.73
CACNA1A-209ENST00000587525 SIRPDQ9H106 197 aa10.49□□□□□ -0.73
CACNA1A-209ENST00000587525 RS1O15537 224 aa10.48□□□□□ -0.73
CACNA1A-209ENST00000587525 CEMP1Q6PRD7 247 aaPredicted RBP10.48□□□□□ -0.73
CACNA1A-209ENST00000587525 F8VRH5 84 aa10.48□□□□□ -0.73
CACNA1A-209ENST00000587525 SMPXQ9UHP9 88 aa10.48□□□□□ -0.73
CACNA1A-209ENST00000587525 LY6G5BQ8NDX9 201 aa10.48□□□□□ -0.73
CACNA1A-209ENST00000587525 MDFICQ9P1T7 246 aa10.48□□□□□ -0.73
CACNA1A-209ENST00000587525 C11orf68Q9H3H3 251 aaKnown RBP10.47□□□□□ -0.73
CACNA1A-209ENST00000587525 F8W735 103 aaPredicted RBP10.47□□□□□ -0.73
CACNA1A-209ENST00000587525 ERG28Q9UKR5 140 aa10.47□□□□□ -0.73
CACNA1A-209ENST00000587525 P0DMU3 169 aa10.47□□□□□ -0.73
CACNA1A-209ENST00000587525 FAM231AP0DMU4 169 aa10.47□□□□□ -0.73
CACNA1A-209ENST00000587525 FAM231CP0DMU5 169 aa10.47□□□□□ -0.73
CACNA1A-209ENST00000587525 APRG1Q8IVJ8 170 aa10.47□□□□□ -0.73
CACNA1A-209ENST00000587525 SPANXB1Q9NS25 103 aaPredicted RBP10.47□□□□□ -0.73
CACNA1A-209ENST00000587525 A0A087WX48 190 aa10.46□□□□□ -0.73
CACNA1A-209ENST00000587525 MEIG1Q5JSS6 88 aa10.46□□□□□ -0.73
CACNA1A-209ENST00000587525 UFSP1Q6NVU6 142 aa10.46□□□□□ -0.73
CACNA1A-209ENST00000587525 SIVA1O15304 175 aa10.46□□□□□ -0.73
CACNA1A-209ENST00000587525 NTN5Q8WTR8 489 aaPredicted RBP10.46□□□□□ -0.73
CACNA1A-209ENST00000587525 PLEKHB2Q96CS7 222 aa10.46□□□□□ -0.73
CACNA1A-209ENST00000587525 RNF183Q96D59 192 aa10.46□□□□□ -0.73
CACNA1A-209ENST00000587525 DCHS2Q6V1P9 2916 aa10.46□□□□□ -0.74
CACNA1A-209ENST00000587525 TRAV13-1A0A0B4J241 112 aa10.46□□□□□ -0.74
CACNA1A-209ENST00000587525 SVIPQ8NHG7 77 aa10.46□□□□□ -0.74
CACNA1A-209ENST00000587525 RNF185Q96GF1 192 aa10.46□□□□□ -0.74
CACNA1A-209ENST00000587525 ODF3BA8MYP8 253 aa10.45□□□□□ -0.74
CACNA1A-209ENST00000587525 B4DSR2 109 aa10.45□□□□□ -0.74
CACNA1A-209ENST00000587525 TSPAN13O95857 204 aa10.45□□□□□ -0.74
CACNA1A-209ENST00000587525 TRPT1Q86TN4 253 aaKnown RBP10.45□□□□□ -0.74
CACNA1A-209ENST00000587525 RNASE1P07998 156 aaKnown RBP10.45□□□□□ -0.74
CACNA1A-209ENST00000587525 TCTEX1D4Q5JR98 221 aa10.45□□□□□ -0.74
CACNA1A-209ENST00000587525 MUC4Q99102 2169 aa10.44□□□□□ -0.74
CACNA1A-209ENST00000587525 RPL35AP18077 110 aaKnown RBP10.44□□□□□ -0.74
CACNA1A-209ENST00000587525 GATD1Q8NB37 220 aa10.44□□□□□ -0.74
CACNA1A-209ENST00000587525 IGLC6P0CF74 106 aa10.44□□□□□ -0.74
CACNA1A-209ENST00000587525 DAND5Q8N907 189 aa10.44□□□□□ -0.74
CACNA1A-209ENST00000587525 ZFAND3Q9H8U3 227 aa10.44□□□□□ -0.74
CACNA1A-209ENST00000587525 SPENQ96T58 3664 aaKnown RBP10.44□□□□□ -0.74
CACNA1A-209ENST00000587525 TRGV1A0A0A0MS02 117 aa10.44□□□□□ -0.74
CACNA1A-209ENST00000587525 TRAV8-3A0A0A6YYJ7 113 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms