RNA–Protein interactions for RNA: ENST00000587223.1

NPC1-206, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 4

Gene NPC1, Length 590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-206ENST00000587223 TPPP3Q9BW30 176 aa4.56□□□□□ -1.68
NPC1-206ENST00000587223 RNASE7Q9H1E1 156 aaKnown RBP4.56□□□□□ -1.68
NPC1-206ENST00000587223 JPT2Q9H910 190 aa4.56□□□□□ -1.68
NPC1-206ENST00000587223 A0A087WWL8 130 aa4.55□□□□□ -1.68
NPC1-206ENST00000587223 TRBV6-4A0A1B0GX49 114 aa4.55□□□□□ -1.68
NPC1-206ENST00000587223 A0A1W2PPQ1 181 aa4.55□□□□□ -1.68
NPC1-206ENST00000587223 F2Z2F3 143 aa4.55□□□□□ -1.68
NPC1-206ENST00000587223 SNAI2O43623 268 aa4.55□□□□□ -1.68
NPC1-206ENST00000587223 SRIP30626 198 aa4.55□□□□□ -1.68
NPC1-206ENST00000587223 CACNG7P62955 275 aa4.55□□□□□ -1.68
NPC1-206ENST00000587223 IFITM2Q01629 132 aa4.55□□□□□ -1.68
NPC1-206ENST00000587223 ESRGQ1W209 222 aa4.55□□□□□ -1.68
NPC1-206ENST00000587223 SOHLH1Q5JUK2 328 aa4.55□□□□□ -1.68
NPC1-206ENST00000587223 FAM74A4Q5TZK3 123 aa4.55□□□□□ -1.68
NPC1-206ENST00000587223 FAM231DQ6ZW35 169 aa4.55□□□□□ -1.68
NPC1-206ENST00000587223 LINC01551Q86U37 167 aa4.55□□□□□ -1.68
NPC1-206ENST00000587223 SLC25A29Q8N8R3 303 aa4.55□□□□□ -1.68
NPC1-206ENST00000587223 FER1L6-AS1Q8NA97 138 aa4.55□□□□□ -1.68
NPC1-206ENST00000587223 OR10AG1Q8NH19 301 aa4.55□□□□□ -1.68
NPC1-206ENST00000587223 SAMD10Q9BYL1 202 aa4.55□□□□□ -1.68
NPC1-206ENST00000587223 RPP21Q9H633 154 aaKnown RBP4.55□□□□□ -1.68
NPC1-206ENST00000587223 A8MWL6 223 aa4.54□□□□□ -1.68
NPC1-206ENST00000587223 K7EQD1 137 aa4.54□□□□□ -1.68
NPC1-206ENST00000587223 RHODO00212 210 aa4.54□□□□□ -1.68
NPC1-206ENST00000587223 CRYGDP07320 174 aa4.54□□□□□ -1.68
NPC1-206ENST00000587223 IGLC6P0CF74 106 aa4.54□□□□□ -1.68
NPC1-206ENST00000587223 SMIM17P0DL12 118 aa4.54□□□□□ -1.68
NPC1-206ENST00000587223 FAM3BP58499 235 aaPredicted RBP4.54□□□□□ -1.68
NPC1-206ENST00000587223 RHOHQ15669 191 aa4.54□□□□□ -1.68
NPC1-206ENST00000587223 LYZL1Q6UWQ5 148 aa4.54□□□□□ -1.68
NPC1-206ENST00000587223 Q6ZSN1 163 aa4.54□□□□□ -1.68
NPC1-206ENST00000587223 NEGR1Q7Z3B1 354 aa4.54□□□□□ -1.68
NPC1-206ENST00000587223 SH2D6Q7Z4S9 175 aa4.54□□□□□ -1.68
NPC1-206ENST00000587223 C14orf178Q8N769 122 aaPredicted RBP4.54□□□□□ -1.68
NPC1-206ENST00000587223 C15orf54Q8N8G6 183 aa4.54□□□□□ -1.68
NPC1-206ENST00000587223 OSTCQ9NRP0 149 aa4.54□□□□□ -1.68
NPC1-206ENST00000587223 NAT8Q9UHE5 227 aa4.54□□□□□ -1.68
NPC1-206ENST00000587223 LINC00588Q9Y4M8 146 aa4.54□□□□□ -1.68
NPC1-206ENST00000587223 CSMD3Q7Z407 3707 aa4.54□□□□□ -1.68
NPC1-206ENST00000587223 IGLV2-18A0A075B6J9 118 aa4.53□□□□□ -1.68
NPC1-206ENST00000587223 LOC100131303A0A0U1RQF7 123 aa4.53□□□□□ -1.68
NPC1-206ENST00000587223 F5H697 171 aa4.53□□□□□ -1.68
NPC1-206ENST00000587223 M0R2N4 97 aa4.53□□□□□ -1.68
NPC1-206ENST00000587223 NXPH4O95158 308 aa4.53□□□□□ -1.68
NPC1-206ENST00000587223 NTF3P20783 257 aa4.53□□□□□ -1.68
NPC1-206ENST00000587223 RPL23P62829 140 aaKnown RBP4.53□□□□□ -1.68
NPC1-206ENST00000587223 TWIST1Q15672 202 aa4.53□□□□□ -1.68
NPC1-206ENST00000587223 ADIRFQ15847 76 aa4.53□□□□□ -1.68
NPC1-206ENST00000587223 UFSP1Q6NVU6 142 aa4.53□□□□□ -1.68
NPC1-206ENST00000587223 WDR73Q6P4I2 378 aa4.53□□□□□ -1.68
NPC1-206ENST00000587223 LYPD5Q6UWN5 251 aa4.53□□□□□ -1.68
NPC1-206ENST00000587223 OR10G8Q8NGN5 311 aa4.53□□□□□ -1.68
NPC1-206ENST00000587223 ISOC2Q96AB3 205 aa4.53□□□□□ -1.68
NPC1-206ENST00000587223 Q9H8V8 135 aa4.53□□□□□ -1.68
NPC1-206ENST00000587223 GAGE12JA6NER3 117 aa4.52□□□□□ -1.69
NPC1-206ENST00000587223 TRGC1P0CF51 173 aa4.52□□□□□ -1.69
NPC1-206ENST00000587223 FOXA3P55318 350 aaPredicted RBP4.52□□□□□ -1.69
NPC1-206ENST00000587223 RAB4BP61018 213 aa4.52□□□□□ -1.69
NPC1-206ENST00000587223 GAGE1Q13065 139 aa4.52□□□□□ -1.69
NPC1-206ENST00000587223 GAGE4Q13068 117 aa4.52□□□□□ -1.69
NPC1-206ENST00000587223 GAGE5Q13069 117 aa4.52□□□□□ -1.69
NPC1-206ENST00000587223 ZNF56Q15929 161 aa4.52□□□□□ -1.69
NPC1-206ENST00000587223 GAGE13Q4V321 117 aa4.52□□□□□ -1.69
NPC1-206ENST00000587223 CT83Q5H943 113 aa4.52□□□□□ -1.69
NPC1-206ENST00000587223 ATP6V0E2Q8NHE4 81 aa4.52□□□□□ -1.69
NPC1-206ENST00000587223 ZNRF2Q8NHG8 242 aa4.52□□□□□ -1.69
NPC1-206ENST00000587223 GTSF1Q8WW33 167 aa4.52□□□□□ -1.69
NPC1-206ENST00000587223 BORCS7Q96B45 105 aa4.52□□□□□ -1.69
NPC1-206ENST00000587223 PGLYRP4Q96LB8 373 aa4.52□□□□□ -1.69
NPC1-206ENST00000587223 AP1S3Q96PC3 154 aa4.52□□□□□ -1.69
NPC1-206ENST00000587223 MSRB1Q9NZV6 116 aa4.52□□□□□ -1.69
NPC1-206ENST00000587223 MRPS16Q9Y3D3 137 aaKnown RBP4.52□□□□□ -1.69
NPC1-206ENST00000587223 STARD9Q9P2P6 4700 aa4.51□□□□□ -1.69
NPC1-206ENST00000587223 TRBV10-1A0A0K0K1A3 114 aa4.51□□□□□ -1.69
NPC1-206ENST00000587223 MGPP08493 103 aa4.51□□□□□ -1.69
NPC1-206ENST00000587223 EVI2AP22794 236 aa4.51□□□□□ -1.69
NPC1-206ENST00000587223 CTRLP40313 264 aa4.51□□□□□ -1.69
NPC1-206ENST00000587223 RPL36AP83881 106 aaKnown RBP4.51□□□□□ -1.69
NPC1-206ENST00000587223 SMIM15Q7Z3B0 74 aa4.51□□□□□ -1.69
NPC1-206ENST00000587223 TSKUQ8WUA8 353 aa4.51□□□□□ -1.69
NPC1-206ENST00000587223 RPL36ALQ969Q0 106 aaKnown RBP4.51□□□□□ -1.69
NPC1-206ENST00000587223 UPK3BQ9BT76 320 aa4.51□□□□□ -1.69
NPC1-206ENST00000587223 GFRA4Q9GZZ7 299 aa4.51□□□□□ -1.69
NPC1-206ENST00000587223 KIF25-AS1Q9Y6Z4 181 aa4.51□□□□□ -1.69
NPC1-206ENST00000587223 V9GYV3 84 aa4.51□□□□□ -1.69
NPC1-206ENST00000587223 DYNC2H1Q8NCM8 4307 aaKnown RBP4.5□□□□□ -1.69
NPC1-206ENST00000587223 TRBV7-3A0A075B6L6 115 aa4.5□□□□□ -1.69
NPC1-206ENST00000587223 TRAV8-6A0A0B4J262 113 aa4.5□□□□□ -1.69
NPC1-206ENST00000587223 NBDYA0A0U1RRE5 68 aa4.5□□□□□ -1.69
NPC1-206ENST00000587223 FAM231BA6NCW3 169 aa4.5□□□□□ -1.69
NPC1-206ENST00000587223 HIGD1CA8MV81 97 aa4.5□□□□□ -1.69
NPC1-206ENST00000587223 H7C1H1 209 aa4.5□□□□□ -1.69
NPC1-206ENST00000587223 SIVA1O15304 175 aa4.5□□□□□ -1.69
NPC1-206ENST00000587223 TIRAPP58753 221 aa4.5□□□□□ -1.69
NPC1-206ENST00000587223 ODF1Q14990 250 aa4.5□□□□□ -1.69
NPC1-206ENST00000587223 UQCC3Q6UW78 93 aa4.5□□□□□ -1.69
NPC1-206ENST00000587223 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.5□□□□□ -1.69
NPC1-206ENST00000587223 CNFNQ9BYD5 112 aa4.5□□□□□ -1.69
NPC1-206ENST00000587223 GTSF1LQ9H1H1 148 aa4.5□□□□□ -1.69
NPC1-206ENST00000587223 DPH3P1Q9H4G8 78 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms